RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 POLR2MP0CAP2 368 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 GAP43P17677 238 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 RAPGEF1Q13905 1077 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 DLGAP5Q15398 846 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 OTOP1Q7RTM1 612 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 CHURC1Q8WUH1 139 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 OSBPL9Q96SU4 736 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 PLCB1Q9NQ66 1216 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 ASTN1O14525 1302 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 CNTNAP1P78357 1384 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 AFPP02771 609 aaKnown RBP19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 C2orf54Q08AI8 447 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 PPP2R5CQ13362 524 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 ASIC2Q16515 512 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 SLC18A3Q16572 532 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 GRIPAP1Q4V328 841 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 RINT1Q6NUQ1 792 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 CCDC174Q6PII3 467 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 MMGT1Q8N4V1 131 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 ANKRD13CQ8N6S4 541 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 COG1Q8WTW3 980 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 TBC1D5Q92609 795 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 SLC5A5Q92911 643 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 GMLQ99445 158 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 OLFML3Q9NRN5 406 aa19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 SLC16A3O15427 465 aaKnown RBP19.75■□□□□ 0.75
PDLIM7-207ENST00000486828 VIL1P09327 827 aaKnown RBP19.75■□□□□ 0.75
PDLIM7-207ENST00000486828 LRCH2Q5VUJ6 765 aa19.75■□□□□ 0.75
PDLIM7-207ENST00000486828 DPY19L2P1Q6NXN4 242 aa19.75■□□□□ 0.75
PDLIM7-207ENST00000486828 EHMT1Q9H9B1 1298 aa19.75■□□□□ 0.75
PDLIM7-207ENST00000486828 METTL14Q9HCE5 456 aaKnown RBP19.75■□□□□ 0.75
PDLIM7-207ENST00000486828 SMCHD1A6NHR9 2005 aa19.75■□□□□ 0.75
PDLIM7-207ENST00000486828 PLA2G6O60733 806 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 AKAP3O75969 853 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 SLITRK3O94933 977 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 GCNT3O95395 438 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 NR3C1P04150 777 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 RPL13P26373 211 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 KLHL30Q0D2K2 578 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 CTTNQ14247 550 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 SPDYE2Q495Y8 402 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 NFRKBQ6P4R8 1299 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 FAM133AQ8N9E0 248 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 ACBD3Q9H3P7 528 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 VCPKMTQ9H867 229 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 VIPAS39Q9H9C1 493 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 TSKSQ9UJT2 592 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 MRPL11Q9Y3B7 192 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 LRRIQ3A6PVS8 624 aaPredicted RBP19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 EIF3DO15371 548 aaKnown RBP eCLIP19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 XRCC5P13010 732 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 DALRD3Q5D0E6 543 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 KLHDC7AQ5VTJ3 777 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 CCDC70Q6NSX1 233 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 PIGOQ8TEQ8 1089 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 DYDC2Q96IM9 177 aa19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 BRCA1P38398 1863 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-207ENST00000486828 BUB1O43683 1085 aa19.73■□□□□ 0.75
PDLIM7-207ENST00000486828 TBC1D12O60347 775 aa19.73■□□□□ 0.75
PDLIM7-207ENST00000486828 RAD17O75943 681 aa19.73■□□□□ 0.75
PDLIM7-207ENST00000486828 MUTP22033 750 aa19.73■□□□□ 0.75
PDLIM7-207ENST00000486828 PRELPP51888 382 aa19.73■□□□□ 0.75
PDLIM7-207ENST00000486828 NAB2Q15742 525 aa19.73■□□□□ 0.75
PDLIM7-207ENST00000486828 C1orf186Q6ZWK4 172 aa19.73■□□□□ 0.75
PDLIM7-207ENST00000486828 FAM160B2Q86V87 743 aa19.73■□□□□ 0.75
PDLIM7-207ENST00000486828 TPH2Q8IWU9 490 aa19.73■□□□□ 0.75
PDLIM7-207ENST00000486828 OGFOD1Q8N543 542 aa19.73■□□□□ 0.75
PDLIM7-207ENST00000486828 TLR10Q9BXR5 811 aa19.73■□□□□ 0.75
PDLIM7-207ENST00000486828 BCAS3Q9H6U6 928 aa19.73■□□□□ 0.75
PDLIM7-207ENST00000486828 RBBP6Q7Z6E9 1792 aaKnown RBP19.73■□□□□ 0.75
PDLIM7-207ENST00000486828 A0A087X0T9 212 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 FAM13AO94988 1023 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 FAM228BP0C875 321 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 EPB41P11171 864 aaKnown RBP19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 ACTN1P12814 892 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 SLC9A1P19634 815 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 ARID5AQ03989 594 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 EXOC3L4Q17RC7 722 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 RTKN2Q8IZC4 609 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 SPATA4Q8NEY3 305 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 RUBCNQ92622 972 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 PSMD1Q99460 953 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 CHMP2AO43633 222 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 NCK2O43639 380 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 GAS7O60861 476 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 UCHL3P15374 230 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 PON1P27169 355 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 NAP1L1P55209 391 aaKnown RBP19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 EPHA7Q15375 998 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 CEP55Q53EZ4 464 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 FKBP1CQ5VVH2 108 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 SLC30A10Q6XR72 485 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 CCNI2Q6ZMN8 369 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 MYH10P35580 1976 aa19.72■□□□□ 0.75
PDLIM7-207ENST00000486828 TGFB1I1O43294 461 aa19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 CASP4P49662 377 aa19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 KCNA1Q09470 495 aa19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 NFIL3Q16649 462 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms