RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 PTPAQ15257 358 aa10.09□□□□□ -0.79
COL12A1-208ENST00000486533 QRICH1Q2TAL8 776 aa10.09□□□□□ -0.79
COL12A1-208ENST00000486533 DMRTA1Q5VZB9 504 aa10.09□□□□□ -0.79
COL12A1-208ENST00000486533 FBXO11Q86XK2 927 aa10.09□□□□□ -0.79
COL12A1-208ENST00000486533 VSTM4Q8IW00 320 aa10.09□□□□□ -0.79
COL12A1-208ENST00000486533 FAM126BQ8IXS8 530 aa10.09□□□□□ -0.79
COL12A1-208ENST00000486533 MNS1Q8NEH6 495 aa10.09□□□□□ -0.79
COL12A1-208ENST00000486533 IGDCC4Q8TDY8 1250 aa10.09□□□□□ -0.79
COL12A1-208ENST00000486533 NAA15Q9BXJ9 866 aaKnown RBP10.09□□□□□ -0.79
COL12A1-208ENST00000486533 DDX41Q9UJV9 622 aaKnown RBP10.09□□□□□ -0.79
COL12A1-208ENST00000486533 TBX21Q9UL17 535 aa10.09□□□□□ -0.79
COL12A1-208ENST00000486533 Q9Y3F1 56 aa10.09□□□□□ -0.79
COL12A1-208ENST00000486533 BIN1O00499 593 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 ATP8B1O43520 1251 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 CDK11BP21127 795 aaKnown RBP10.08□□□□□ -0.8
COL12A1-208ENST00000486533 MARCKSP29966 332 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-208ENST00000486533 CPT1AP50416 773 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 EPHB4P54760 987 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 ETF1P62495 437 aaKnown RBP10.08□□□□□ -0.8
COL12A1-208ENST00000486533 ITGA7Q13683 1181 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 TUBB2AQ13885 445 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 NCAPHQ15003 741 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 POSTNQ15063 836 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 SEC23AQ15436 765 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 NTRK3Q16288 839 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 FILIP1LQ4L180 1135 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 ZNF697Q5TEC3 545 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 MCF2L2Q86YR7 1114 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 STAG2Q8N3U4 1231 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 ANKRD20A12PQ8NF67 263 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 OR6J1Q8NGC5 347 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 SCFD2Q8WU76 684 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 DDX27Q96GQ7 796 aaKnown RBP10.08□□□□□ -0.8
COL12A1-208ENST00000486533 FAM161BQ96MY7 647 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 CTAGE1Q96RT6 745 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 MAP3K14Q99558 947 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 TUBB2BQ9BVA1 445 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 RNF26Q9BY78 433 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-208ENST00000486533 PPP1R12CQ9BZL4 782 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 JMJD4Q9H9V9 463 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 MTMR10Q9NXD2 777 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 DNAI1Q9UI46 699 aa10.08□□□□□ -0.8
COL12A1-208ENST00000486533 MRPL11Q9Y3B7 192 aaKnown RBP10.08□□□□□ -0.8
COL12A1-208ENST00000486533 KLRF2D3W0D1 207 aa10.07□□□□□ -0.8
COL12A1-208ENST00000486533 STX10O60499 249 aa10.07□□□□□ -0.8
COL12A1-208ENST00000486533 EDNRBP24530 442 aa10.07□□□□□ -0.8
COL12A1-208ENST00000486533 PSMC6P62333 389 aa10.07□□□□□ -0.8
COL12A1-208ENST00000486533 BRDTQ58F21 947 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-208ENST00000486533 NT5DC1Q5TFE4 455 aa10.07□□□□□ -0.8
COL12A1-208ENST00000486533 JAKMIP3Q5VZ66 844 aa10.07□□□□□ -0.8
COL12A1-208ENST00000486533 MFSD5Q6N075 450 aa10.07□□□□□ -0.8
COL12A1-208ENST00000486533 SHC4Q6S5L8 630 aa10.07□□□□□ -0.8
COL12A1-208ENST00000486533 DIS3L2Q8IYB7 885 aaKnown RBP10.07□□□□□ -0.8
COL12A1-208ENST00000486533 ENOX1Q8TC92 643 aaKnown RBP10.07□□□□□ -0.8
COL12A1-208ENST00000486533 NSUN6Q8TEA1 469 aaKnown RBP10.07□□□□□ -0.8
COL12A1-208ENST00000486533 TSC1Q92574 1164 aa10.07□□□□□ -0.8
COL12A1-208ENST00000486533 TBC1D5Q92609 795 aa10.07□□□□□ -0.8
COL12A1-208ENST00000486533 ARID3AQ99856 593 aa10.07□□□□□ -0.8
COL12A1-208ENST00000486533 AMNQ9BXJ7 453 aa10.07□□□□□ -0.8
COL12A1-208ENST00000486533 TRMT1Q9NXH9 659 aaKnown RBP10.07□□□□□ -0.8
COL12A1-208ENST00000486533 ZNF215Q9UL58 517 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-208ENST00000486533 PRUNE2Q8WUY3 3088 aa10.07□□□□□ -0.8
COL12A1-208ENST00000486533 BAZ2BQ9UIF8 2168 aaKnown RBP10.07□□□□□ -0.8
COL12A1-208ENST00000486533 RBM47A0AV96 593 aaKnown RBP10.06□□□□□ -0.8
COL12A1-208ENST00000486533 CFBP00751 764 aa10.06□□□□□ -0.8
COL12A1-208ENST00000486533 MYL3P08590 195 aa10.06□□□□□ -0.8
COL12A1-208ENST00000486533 TXNP10599 105 aaKnown RBP10.06□□□□□ -0.8
COL12A1-208ENST00000486533 CSF2RAP15509 400 aa10.06□□□□□ -0.8
COL12A1-208ENST00000486533 PPIGQ13427 754 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL12A1-208ENST00000486533 ARHGEF16Q5VV41 709 aa10.06□□□□□ -0.8
COL12A1-208ENST00000486533 E4F1Q66K89 784 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-208ENST00000486533 FAM109BQ6ICB4 259 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-208ENST00000486533 ARMCX5Q6P1M9 558 aa10.06□□□□□ -0.8
COL12A1-208ENST00000486533 TMEM199Q8N511 208 aa10.06□□□□□ -0.8
COL12A1-208ENST00000486533 SYTL5Q8TDW5 730 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-208ENST00000486533 UBXN4Q92575 508 aa10.06□□□□□ -0.8
COL12A1-208ENST00000486533 TAAR1Q96RJ0 339 aa10.06□□□□□ -0.8
COL12A1-208ENST00000486533 RMDN3Q96TC7 470 aa10.06□□□□□ -0.8
COL12A1-208ENST00000486533 HIPK3Q9H422 1215 aa10.06□□□□□ -0.8
COL12A1-208ENST00000486533 MAD2L2Q9UI95 211 aa10.06□□□□□ -0.8
COL12A1-208ENST00000486533 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL12A1-208ENST00000486533 SRPRBQ9Y5M8 271 aaKnown RBP10.06□□□□□ -0.8
COL12A1-208ENST00000486533 GRIN2DO15399 1336 aa10.06□□□□□ -0.8
COL12A1-208ENST00000486533 CCDC66A2RUB6 948 aa10.05□□□□□ -0.8
COL12A1-208ENST00000486533 USP27XA6NNY8 438 aa10.05□□□□□ -0.8
COL12A1-208ENST00000486533 ZBTB5O15062 677 aa10.05□□□□□ -0.8
COL12A1-208ENST00000486533 NKRFO15226 690 aaKnown RBP eCLIP10.05□□□□□ -0.8
COL12A1-208ENST00000486533 HRO43593 1189 aa10.05□□□□□ -0.8
COL12A1-208ENST00000486533 CD4P01730 458 aa10.05□□□□□ -0.8
COL12A1-208ENST00000486533 EIF2AK2P19525 551 aaKnown RBP10.05□□□□□ -0.8
COL12A1-208ENST00000486533 CYP2C18P33260 490 aa10.05□□□□□ -0.8
COL12A1-208ENST00000486533 KRT2P35908 639 aa10.05□□□□□ -0.8
COL12A1-208ENST00000486533 SMAD3P84022 425 aaKnown RBP10.05□□□□□ -0.8
COL12A1-208ENST00000486533 PURAQ00577 322 aaKnown RBP10.05□□□□□ -0.8
COL12A1-208ENST00000486533 SPAG1Q07617 926 aa10.05□□□□□ -0.8
COL12A1-208ENST00000486533 SEMA3FQ13275 785 aa10.05□□□□□ -0.8
COL12A1-208ENST00000486533 PNOCQ13519 176 aa10.05□□□□□ -0.8
COL12A1-208ENST00000486533 TTLL4Q14679 1199 aa10.05□□□□□ -0.8
COL12A1-208ENST00000486533 FAM47CQ5HY64 1035 aa10.05□□□□□ -0.8
COL12A1-208ENST00000486533 SPECC1LQ69YQ0 1117 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms