RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 NRXN1Q9ULB1 1477 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 GNGT2O14610 69 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 CNGA1P29973 690 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 NT5C2P49902 561 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 MFAP3P55082 362 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 STX1BP61266 288 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 BBS9Q3SYG4 887 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 TMEM259Q4ZIN3 620 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 TRMT10CQ7L0Y3 403 aaKnown RBP16.29■□□□□ 0.2
RXRA-203ENST00000484822 RSPH3Q86UC2 560 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 TRAIPQ9BWF2 469 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 ABT1Q9ULW3 272 aaKnown RBP16.29■□□□□ 0.2
RXRA-203ENST00000484822 ABCC12Q96J65 1359 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 DCTN3O75935 186 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 P4HA1P13674 534 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 FAM47CQ5HY64 1035 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 NCAPGQ9BPX3 1015 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 PAGR1Q9BTK6 254 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 ISCA1Q9BUE6 129 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 HDAC6Q9UBN7 1215 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 SRPRBQ9Y5M8 271 aaKnown RBP16.29■□□□□ 0.2
RXRA-203ENST00000484822 M0R2C6 588 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 NECTIN1Q15223 517 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 DBNDD1Q9H9R9 158 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 GCNT4Q9P109 453 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 MRPL11Q9Y3B7 192 aaKnown RBP16.29■□□□□ 0.2
RXRA-203ENST00000484822 KIF1CO43896 1103 aaKnown RBP16.29■□□□□ 0.2
RXRA-203ENST00000484822 CHGBP05060 677 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 ATICP31939 592 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 AOC3Q16853 763 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 ABHD10Q9NUJ1 306 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 PPARGC1AQ9UBK2 798 aaKnown RBP16.29■□□□□ 0.2
RXRA-203ENST00000484822 NUB1Q9Y5A7 615 aa16.29■□□□□ 0.2
RXRA-203ENST00000484822 PALMO75781 387 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 CPP00450 1065 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 TRIM28Q13263 835 aaKnown RBP16.28■□□□□ 0.2
RXRA-203ENST00000484822 GLE1Q53GS7 698 aaKnown RBP16.28■□□□□ 0.2
RXRA-203ENST00000484822 MMS19Q96T76 1030 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 PPME1Q9Y570 386 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 SPATA31D1Q6ZQQ2 1576 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 MYO3AQ8NEV4 1616 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 PLS3P13797 630 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 RASGRF1Q13972 1273 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 SLFN13Q68D06 897 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 RINT1Q6NUQ1 792 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 MLXIPQ9HAP2 919 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 KRT82Q9NSB4 513 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 ANKFY1Q9P2R3 1169 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 GDAQ9Y2T3 454 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 RPAP1Q9BWH6 1393 aaPredicted RBP16.28■□□□□ 0.2
RXRA-203ENST00000484822 SYNJ2BP-COX16A0A087WUM0 186 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 PSMC2P35998 433 aaKnown RBP16.28■□□□□ 0.2
RXRA-203ENST00000484822 ART3Q13508 389 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 KCTD2Q14681 263 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 TBC1D10BQ4KMP7 808 aaPredicted RBP16.28■□□□□ 0.2
RXRA-203ENST00000484822 GPATCH4Q5T3I0 446 aaKnown RBP16.28■□□□□ 0.2
RXRA-203ENST00000484822 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.28■□□□□ 0.2
RXRA-203ENST00000484822 TTLL6Q8N841 843 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 DHX36Q9H2U1 1008 aaKnown RBP16.28■□□□□ 0.2
RXRA-203ENST00000484822 IRAK4Q9NWZ3 460 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 COX16Q9P0S2 106 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 PLEKHG2Q9H7P9 1386 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 LMNAP02545 664 aaKnown RBP16.28■□□□□ 0.2
RXRA-203ENST00000484822 ETNK1Q9HBU6 452 aa16.28■□□□□ 0.2
RXRA-203ENST00000484822 TESPA1A2RU30 521 aaPredicted RBP16.27■□□□□ 0.2
RXRA-203ENST00000484822 H0YCG3 227 aa16.27■□□□□ 0.2
RXRA-203ENST00000484822 CCDC188H7C350 402 aa16.27■□□□□ 0.2
RXRA-203ENST00000484822 CAPN9O14815 690 aa16.27■□□□□ 0.2
RXRA-203ENST00000484822 CASP1P29466 404 aa16.27■□□□□ 0.2
RXRA-203ENST00000484822 IREB2P48200 963 aaKnown RBP16.27■□□□□ 0.2
RXRA-203ENST00000484822 PPP2R2AP63151 447 aa16.27■□□□□ 0.2
RXRA-203ENST00000484822 EPHA10Q5JZY3 1008 aa16.27■□□□□ 0.2
RXRA-203ENST00000484822 C10orf76Q5T2E6 689 aa16.27■□□□□ 0.2
RXRA-203ENST00000484822 PI16Q6UXB8 463 aa16.27■□□□□ 0.2
RXRA-203ENST00000484822 SETD1BQ9UPS6 1966 aaKnown RBP16.27■□□□□ 0.2
RXRA-203ENST00000484822 MAP7D3Q8IWC1 876 aa16.27■□□□□ 0.2
RXRA-203ENST00000484822 OSBP2Q969R2 916 aa16.27■□□□□ 0.2
RXRA-203ENST00000484822 FAM193BQ96PV7 902 aaPredicted RBP16.27■□□□□ 0.2
RXRA-203ENST00000484822 GOLPH3LQ9H4A5 285 aa16.27■□□□□ 0.2
RXRA-203ENST00000484822 KRT1P04264 644 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 VSNL1P62760 191 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 GUCY1A3Q02108 690 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 GRAMD4Q6IC98 578 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 TTC17Q96AE7 1141 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 AK8Q96MA6 479 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 CXorf56Q9H5V9 222 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 PCDHA4Q9UN74 947 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 MAGED2Q9UNF1 606 aaPredicted RBP16.27■□□□□ 0.19
RXRA-203ENST00000484822 NOC2LQ9Y3T9 749 aaKnown RBP16.27■□□□□ 0.19
RXRA-203ENST00000484822 LAD1O00515 517 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 DYNLL1P63167 89 aaKnown RBP16.27■□□□□ 0.19
RXRA-203ENST00000484822 SPARCL1Q14515 664 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 FBXO11Q86XK2 927 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 WDR24Q96S15 920 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 CSRNP1Q96S65 589 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 SUFUQ9UMX1 484 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 ADGRG1Q9Y653 693 aa16.27■□□□□ 0.19
RXRA-203ENST00000484822 ITKQ08881 620 aa16.26■□□□□ 0.19
RXRA-203ENST00000484822 PCGF5Q86SE9 256 aa16.26■□□□□ 0.19
RXRA-203ENST00000484822 SRRM1Q8IYB3 904 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms