RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 BRINP1O60477 761 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 GJA4P35212 333 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 DSG1Q02413 1049 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 PLP2Q04941 152 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 OTOP1Q7RTM1 612 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 STRA8Q7Z7C7 330 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 FERMT3Q86UX7 667 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 RBM12BQ8IXT5 1001 aaKnown RBP5.3□□□□□ -1.56
CBX3-207ENST00000481300 LINC00482Q8N8I6 264 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 SH3RF2Q8TEC5 729 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 ZBTB8AQ96BR9 441 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 GPR101Q96P66 508 aaPredicted RBP5.3□□□□□ -1.56
CBX3-207ENST00000481300 GORASP1Q9BQQ3 440 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 USP40Q9NVE5 1235 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 RIC8BQ9NVN3 520 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 THG1LQ9NWX6 298 aaKnown RBP5.3□□□□□ -1.56
CBX3-207ENST00000481300 ZEB2O60315 1214 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 CLASP2O75122 1294 aaKnown RBP5.29□□□□□ -1.56
CBX3-207ENST00000481300 LTFP02788 710 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 ADRB1P08588 477 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 CYP2C8P10632 490 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 PTPN1P18031 435 aaKnown RBP5.29□□□□□ -1.56
CBX3-207ENST00000481300 KPNA1P52294 538 aaPredicted RBP5.29□□□□□ -1.56
CBX3-207ENST00000481300 EPHA5P54756 1037 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 GRIN1Q05586 938 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 SMAD4Q13485 552 aaKnown RBP5.29□□□□□ -1.56
CBX3-207ENST00000481300 UBXN11Q5T124 520 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 BTBD8Q5XKL5 378 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 CPZQ66K79 652 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 ETV3LQ6ZN32 361 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 GGNQ86UU5 652 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 ZC3H18Q86VM9 953 aaKnown RBP5.29□□□□□ -1.56
CBX3-207ENST00000481300 ZNF761Q86XN6 746 aaPredicted RBP5.29□□□□□ -1.56
CBX3-207ENST00000481300 PASD1Q8IV76 773 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 ARRDC4Q8NCT1 418 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 SMC1BQ8NDV3 1235 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 CHTF18Q8WVB6 975 aa5.29□□□□□ -1.56
CBX3-207ENST00000481300 PUS7Q96PZ0 661 aaKnown RBP5.29□□□□□ -1.56
CBX3-207ENST00000481300 APOBEC2Q9Y235 224 aaKnown RBP5.29□□□□□ -1.56
CBX3-207ENST00000481300 PRAMEF25A6NGN4 478 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 FKBP9O95302 570 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 ATP2A2P16615 1042 aaKnown RBP5.28□□□□□ -1.56
CBX3-207ENST00000481300 LSSP48449 732 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 SARSP49591 514 aaKnown RBP5.28□□□□□ -1.56
CBX3-207ENST00000481300 KIF11P52732 1056 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 TMEM132BQ14DG7 1078 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 DBX2Q6ZNG2 339 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 FKBP9P1Q75LS8 142 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 DDX42Q86XP3 938 aaKnown RBP eCLIP5.28□□□□□ -1.56
CBX3-207ENST00000481300 NOSTRINQ8IVI9 506 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 FAM126BQ8IXS8 530 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 FAM26EQ8N5C1 309 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 TTLL11Q8NHH1 800 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 WDR66Q8TBY9 1149 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 CLEC4DQ8WXI8 215 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 TOE1Q96GM8 510 aaKnown RBP5.28□□□□□ -1.56
CBX3-207ENST00000481300 SCYL1Q96KG9 808 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 NGRNQ9NPE2 291 aaKnown RBP5.28□□□□□ -1.56
CBX3-207ENST00000481300 KCNH7Q9NS40 1196 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 OXSMQ9NWU1 459 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 DTLQ9NZJ0 730 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 NTMQ9P121 344 aa5.28□□□□□ -1.56
CBX3-207ENST00000481300 NEMP1O14524 444 aa5.27□□□□□ -1.57
CBX3-207ENST00000481300 BPIP17213 487 aa5.27□□□□□ -1.57
CBX3-207ENST00000481300 CDK11BP21127 795 aaKnown RBP5.27□□□□□ -1.57
CBX3-207ENST00000481300 CNR2P34972 360 aa5.27□□□□□ -1.57
CBX3-207ENST00000481300 ADCYAP1R1P41586 468 aa5.27□□□□□ -1.57
CBX3-207ENST00000481300 GJA9P57773 515 aa5.27□□□□□ -1.57
CBX3-207ENST00000481300 STAT4Q14765 748 aa5.27□□□□□ -1.57
CBX3-207ENST00000481300 SPATS1Q496A3 300 aa5.27□□□□□ -1.57
CBX3-207ENST00000481300 ATP13A4Q4VNC1 1196 aa5.27□□□□□ -1.57
CBX3-207ENST00000481300 PAN2Q504Q3 1202 aaKnown RBP5.27□□□□□ -1.57
CBX3-207ENST00000481300 MIB1Q86YT6 1006 aa5.27□□□□□ -1.57
CBX3-207ENST00000481300 EFHBQ8N7U6 833 aa5.27□□□□□ -1.57
CBX3-207ENST00000481300 KIAA1958Q8N8K9 716 aa5.27□□□□□ -1.57
CBX3-207ENST00000481300 C11orf84Q9BUA3 381 aaPredicted RBP5.27□□□□□ -1.57
CBX3-207ENST00000481300 FAM126AQ9BYI3 521 aaPredicted RBP5.27□□□□□ -1.57
CBX3-207ENST00000481300 ACSS2Q9NR19 701 aa5.27□□□□□ -1.57
CBX3-207ENST00000481300 TELO2Q9Y4R8 837 aa5.27□□□□□ -1.57
CBX3-207ENST00000481300 B3GALT1Q9Y5Z6 326 aa5.27□□□□□ -1.57
CBX3-207ENST00000481300 FAM90A27PA6NNH2 459 aa5.26□□□□□ -1.57
CBX3-207ENST00000481300 EYA4O95677 639 aa5.26□□□□□ -1.57
CBX3-207ENST00000481300 ZBTB48P10074 688 aaPredicted RBP5.26□□□□□ -1.57
CBX3-207ENST00000481300 FAHP16930 419 aa5.26□□□□□ -1.57
CBX3-207ENST00000481300 POU3F3P20264 500 aaPredicted RBP5.26□□□□□ -1.57
CBX3-207ENST00000481300 THBS2P35442 1172 aa5.26□□□□□ -1.57
CBX3-207ENST00000481300 NKX3-2P78367 333 aa5.26□□□□□ -1.57
CBX3-207ENST00000481300 TMPRSS15P98073 1019 aa5.26□□□□□ -1.57
CBX3-207ENST00000481300 RNF219Q5W0B1 726 aaPredicted RBP5.26□□□□□ -1.57
CBX3-207ENST00000481300 CD300LDQ6UXZ3 194 aa5.26□□□□□ -1.57
CBX3-207ENST00000481300 PRPF38AQ8NAV1 312 aaKnown RBP5.26□□□□□ -1.57
CBX3-207ENST00000481300 ADAMTS17Q8TE56 1095 aa5.26□□□□□ -1.57
CBX3-207ENST00000481300 TOMM22Q9NS69 142 aa5.26□□□□□ -1.57
CBX3-207ENST00000481300 SPTLC3Q9NUV7 552 aa5.26□□□□□ -1.57
CBX3-207ENST00000481300 H2AFY2Q9P0M6 372 aaPredicted RBP5.26□□□□□ -1.57
CBX3-207ENST00000481300 SPO11Q9Y5K1 396 aa5.26□□□□□ -1.57
CBX3-207ENST00000481300 ALG1L2C9J202 215 aa5.25□□□□□ -1.57
CBX3-207ENST00000481300 FOXP2O15409 715 aa5.25□□□□□ -1.57
CBX3-207ENST00000481300 GPR39O43194 453 aa5.25□□□□□ -1.57
CBX3-207ENST00000481300 ULK1O75385 1050 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms