RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 GNAT1P11488 350 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 CLK2P49760 499 aaKnown RBP12.42□□□□□ -0.42
CCDC58-205ENST00000479899 NT5C2P49902 561 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 NHLH1Q02575 133 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 GHRHRQ02643 423 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 HDAC1Q13547 482 aaPredicted RBP12.42□□□□□ -0.42
CCDC58-205ENST00000479899 SLC35G1Q2M3R5 365 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 MSS51Q4VC12 460 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 PPP1R18Q6NYC8 613 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 TICAM2Q86XR7 235 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 LMBR1Q8WVP7 490 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 MTMR8Q96EF0 704 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 IL17RAQ96F46 866 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 FBXL18Q96ME1 805 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 DSCC1Q9BVC3 393 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 SLC6A16Q9GZN6 736 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 MAP3K20Q9NYL2 800 aaKnown RBP12.42□□□□□ -0.42
CCDC58-205ENST00000479899 LIMD1Q9UGP4 676 aa12.42□□□□□ -0.42
CCDC58-205ENST00000479899 ZNF215Q9UL58 517 aaPredicted RBP12.42□□□□□ -0.42
CCDC58-205ENST00000479899 MUC6Q6W4X9 2439 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 GRM6O15303 877 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 CAND2O75155 1236 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 TGFB3P10600 412 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 IBSPP21815 317 aaPredicted RBP12.41□□□□□ -0.42
CCDC58-205ENST00000479899 MARK3P27448 753 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 HOXC8P31273 242 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 GTF2F1P35269 517 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC58-205ENST00000479899 IRS1P35568 1242 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 MRPS9P82933 396 aaKnown RBP12.41□□□□□ -0.42
CCDC58-205ENST00000479899 DLX2Q07687 328 aaPredicted RBP12.41□□□□□ -0.42
CCDC58-205ENST00000479899 HYAL1Q12794 435 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 NEDD9Q14511 834 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 GRM4Q14833 912 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 SEC23AQ15436 765 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 METTL7BQ6UX53 244 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 RUFY4Q6ZNE9 571 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 ADHFE1Q8IWW8 467 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 FAM160A2Q8N612 972 aaPredicted RBP12.41□□□□□ -0.42
CCDC58-205ENST00000479899 GPR20Q99678 358 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.41□□□□□ -0.42
CCDC58-205ENST00000479899 MUTYHQ9UIF7 546 aa12.41□□□□□ -0.42
CCDC58-205ENST00000479899 PALM3A6NDB9 673 aaPredicted RBP12.4□□□□□ -0.42
CCDC58-205ENST00000479899 HIP1O00291 1037 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 LINC01565O15544 149 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 FIBPO43427 364 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 MBTPS2O43462 519 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 LTBRP36941 435 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 SEMA3FQ13275 785 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 BTG3Q14201 252 aaPredicted RBP12.4□□□□□ -0.42
CCDC58-205ENST00000479899 HFE2Q6ZVN8 426 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 RETREG3Q86VR2 466 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 CHD1LQ86WJ1 897 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 PLEKHM2Q8IWE5 1019 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 C11orf84Q9BUA3 381 aaPredicted RBP12.4□□□□□ -0.42
CCDC58-205ENST00000479899 USP26Q9BXU7 913 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 UPF3BQ9BZI7 483 aaKnown RBP12.4□□□□□ -0.42
CCDC58-205ENST00000479899 IL25Q9H293 177 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 SENP2Q9HC62 589 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 PKD2L1Q9P0L9 805 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 PRKAG3Q9UGI9 489 aa12.4□□□□□ -0.42
CCDC58-205ENST00000479899 ERICH2A1L162 156 aa12.39□□□□□ -0.43
CCDC58-205ENST00000479899 IFIT3O14879 490 aaKnown RBP12.39□□□□□ -0.43
CCDC58-205ENST00000479899 CYTH3O43739 400 aa12.39□□□□□ -0.43
CCDC58-205ENST00000479899 TBX10O75333 385 aa12.39□□□□□ -0.43
CCDC58-205ENST00000479899 S1PR4O95977 384 aa12.39□□□□□ -0.43
CCDC58-205ENST00000479899 CHRNA1P02708 482 aa12.39□□□□□ -0.43
CCDC58-205ENST00000479899 BMPR1AP36894 532 aa12.39□□□□□ -0.43
CCDC58-205ENST00000479899 IGBP1P78318 339 aa12.39□□□□□ -0.43
CCDC58-205ENST00000479899 TRDNQ13061 729 aa12.39□□□□□ -0.43
CCDC58-205ENST00000479899 TRAF1Q13077 416 aa12.39□□□□□ -0.43
CCDC58-205ENST00000479899 SAMD3Q8N6K7 520 aa12.39□□□□□ -0.43
CCDC58-205ENST00000479899 SMARCC2Q8TAQ2 1214 aa12.39□□□□□ -0.43
CCDC58-205ENST00000479899 PCMTD1Q96MG8 357 aaPredicted RBP12.39□□□□□ -0.43
CCDC58-205ENST00000479899 INPP4AQ96PE3 977 aaPredicted RBP12.39□□□□□ -0.43
CCDC58-205ENST00000479899 LMAN2LQ9H0V9 348 aa12.39□□□□□ -0.43
CCDC58-205ENST00000479899 ALG13Q9NP73 1137 aaKnown RBP12.39□□□□□ -0.43
CCDC58-205ENST00000479899 FRMPD4Q14CM0 1322 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 BAZ2BQ9UIF8 2168 aaKnown RBP12.38□□□□□ -0.43
CCDC58-205ENST00000479899 PNMA6FA0A0J9YX94 578 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 SPATA31C2B4DYI2 1134 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 C5orf67F2Z3F1 127 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 STXBP3O00186 592 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 LINC00271P0C7V0 271 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 ICAM3P32942 547 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 TCF7P36402 384 aaPredicted RBP12.38□□□□□ -0.43
CCDC58-205ENST00000479899 NDUFV1P49821 464 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 PPFIA1Q13136 1202 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 LPIN1Q14693 890 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 COL19A1Q14993 1142 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 WTAPQ15007 396 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 SMAD2Q15796 467 aaKnown RBP12.38□□□□□ -0.43
CCDC58-205ENST00000479899 PAN2Q504Q3 1202 aaKnown RBP12.38□□□□□ -0.43
CCDC58-205ENST00000479899 FAM26DQ5JW98 314 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 USP17L6PQ6QN14 398 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 RNF135Q8IUD6 432 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 CUL5Q93034 780 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 ZBTB10Q96DT7 871 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 POP1Q99575 1024 aaKnown RBP12.38□□□□□ -0.43
CCDC58-205ENST00000479899 RIOX1Q9H6W3 641 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 CD207Q9UJ71 328 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms