RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ICA1Q05084 483 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 EPHA7Q15375 998 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 RPS6KA1Q15418 735 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 NFIL3Q16649 462 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 ZFPM1Q8IX07 1006 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 USP38Q8NB14 1042 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 TSEN2Q8NCE0 465 aaKnown RBP26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 TRERF1Q96PN7 1200 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 OLFML3Q9NRN5 406 aa26.97■■□□□ 1.91
SYNGAP1-206ENST00000479510 ADAMTSL1Q8N6G6 1762 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 FLOT1O75955 427 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 GFPT2O94808 682 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 EYA4O95677 639 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 IRAK1P51617 712 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 ARID5AQ03989 594 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 TRAF1Q13077 416 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 PABPC4Q13310 644 aaKnown RBP eCLIP26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 FOXR1Q6PIV2 292 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 BTNL9Q6UXG8 535 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 AEBP2Q6ZN18 517 aaPredicted RBP26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 VPS36Q86VN1 386 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 SIAH1Q8IUQ4 282 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 CD302Q8IX05 232 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 CAPS2Q9BXY5 557 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 TRIM34Q9BYJ4 488 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 VAV3Q9UKW4 847 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 NENFQ9UMX5 172 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 A0A0A6YYK5 440 aaPredicted RBP26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 NR3C1P04150 777 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 MYBP10242 640 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 PSMC6P62333 389 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 SLC15A2Q16348 729 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 DNAJC21Q5F1R6 531 aaKnown RBP26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 SYDE2Q5VT97 1194 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 ZNF571Q7Z3V5 609 aaPredicted RBP26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 IQCKQ8N0W5 287 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 LMBR1Q8WVP7 490 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 CALR3Q96L12 384 aaKnown RBP26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 RSPH14Q9UHP6 348 aa26.96■■□□□ 1.91
SYNGAP1-206ENST00000479510 F5H6K3 240 aa26.95■■□□□ 1.9
SYNGAP1-206ENST00000479510 PIK3CDO00329 1044 aa26.95■■□□□ 1.9
SYNGAP1-206ENST00000479510 EIF3DO15371 548 aaKnown RBP eCLIP26.95■■□□□ 1.9
SYNGAP1-206ENST00000479510 TBCAO75347 108 aaKnown RBP26.95■■□□□ 1.9
SYNGAP1-206ENST00000479510 KLRC3Q07444 240 aa26.95■■□□□ 1.9
SYNGAP1-206ENST00000479510 ACTRT1Q8TDG2 376 aa26.95■■□□□ 1.9
SYNGAP1-206ENST00000479510 P2RX7Q99572 595 aaKnown RBP26.95■■□□□ 1.9
SYNGAP1-206ENST00000479510 PACSIN1Q9BY11 444 aa26.95■■□□□ 1.9
SYNGAP1-206ENST00000479510 EPB41L5Q9HCM4 733 aa26.95■■□□□ 1.9
SYNGAP1-206ENST00000479510 NAGPAQ9UK23 515 aa26.95■■□□□ 1.9
SYNGAP1-206ENST00000479510 NRXN2Q9P2S2 1712 aa26.95■■□□□ 1.9
SYNGAP1-206ENST00000479510 SLC9A1P19634 815 aa26.94■■□□□ 1.9
SYNGAP1-206ENST00000479510 SEPT12Q8IYM1 358 aa26.94■■□□□ 1.9
SYNGAP1-206ENST00000479510 FAM86B1E9PN63 330 aa26.94■■□□□ 1.9
SYNGAP1-206ENST00000479510 KIF4AO95239 1232 aa26.94■■□□□ 1.9
SYNGAP1-206ENST00000479510 FAM86B2P0C5J1 330 aa26.94■■□□□ 1.9
SYNGAP1-206ENST00000479510 JAM2P57087 298 aa26.94■■□□□ 1.9
SYNGAP1-206ENST00000479510 GUCY2DQ02846 1103 aa26.94■■□□□ 1.9
SYNGAP1-206ENST00000479510 CFAP58Q5T655 872 aa26.94■■□□□ 1.9
SYNGAP1-206ENST00000479510 EMC10Q5UCC4 262 aa26.94■■□□□ 1.9
SYNGAP1-206ENST00000479510 LRRC57Q8N9N7 239 aa26.94■■□□□ 1.9
SYNGAP1-206ENST00000479510 HINFPQ9BQA5 517 aa26.94■■□□□ 1.9
SYNGAP1-206ENST00000479510 FAM198AQ9UFP1 575 aa26.94■■□□□ 1.9
SYNGAP1-206ENST00000479510 ASTN1O14525 1302 aa26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 MSH4O15457 936 aa26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 AKAP3O75969 853 aa26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 CARSP49589 748 aaKnown RBP26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 NPEPPSP55786 919 aa26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 ALKBH5Q6P6C2 394 aaKnown RBP26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 KRT12Q99456 494 aa26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 NFU1Q9UMS0 254 aa26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 DDTLA6NHG4 134 aaPredicted RBP26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 RAD21O60216 631 aa26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 ACTN1P12814 892 aa26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 CORO7P57737 925 aa26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 MRPS25P82663 173 aaKnown RBP26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 STRIP1Q5VSL9 837 aa26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 SLC35C1Q96A29 364 aa26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 ZIM3Q96PE6 472 aa26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 RABGAP1Q9Y3P9 1069 aa26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 DAAM1Q9Y4D1 1078 aa26.93■■□□□ 1.9
SYNGAP1-206ENST00000479510 UBE4BO95155 1302 aa26.92■■□□□ 1.9
SYNGAP1-206ENST00000479510 MEIS1O00470 390 aa26.92■■□□□ 1.9
SYNGAP1-206ENST00000479510 EIF3HO15372 352 aaKnown RBP eCLIP26.92■■□□□ 1.9
SYNGAP1-206ENST00000479510 NDUFB10O96000 172 aa26.92■■□□□ 1.9
SYNGAP1-206ENST00000479510 FERP16591 822 aa26.92■■□□□ 1.9
SYNGAP1-206ENST00000479510 PDE6BP35913 854 aa26.92■■□□□ 1.9
SYNGAP1-206ENST00000479510 FMNL3Q8IVF7 1028 aa26.92■■□□□ 1.9
SYNGAP1-206ENST00000479510 NLGN1Q8N2Q7 840 aa26.92■■□□□ 1.9
SYNGAP1-206ENST00000479510 SCFD2Q8WU76 684 aa26.92■■□□□ 1.9
SYNGAP1-206ENST00000479510 TUFT1Q9NNX1 390 aa26.92■■□□□ 1.9
SYNGAP1-206ENST00000479510 SIX2Q9NPC8 291 aa26.92■■□□□ 1.9
SYNGAP1-206ENST00000479510 MUTP22033 750 aa26.91■■□□□ 1.9
SYNGAP1-206ENST00000479510 MAGEA9P43362 315 aa26.91■■□□□ 1.9
SYNGAP1-206ENST00000479510 CUL1Q13616 776 aa26.91■■□□□ 1.9
SYNGAP1-206ENST00000479510 ABCB5Q2M3G0 1257 aa26.91■■□□□ 1.9
SYNGAP1-206ENST00000479510 SYCE1Q8N0S2 351 aa26.91■■□□□ 1.9
SYNGAP1-206ENST00000479510 UIMC1Q96RL1 719 aa26.91■■□□□ 1.9
SYNGAP1-206ENST00000479510 EIF2AK1Q9BQI3 630 aaKnown RBP26.91■■□□□ 1.9
SYNGAP1-206ENST00000479510 MKNK1Q9BUB5 465 aa26.91■■□□□ 1.9
SYNGAP1-206ENST00000479510 TTMPQ5BVD1 217 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms