RNA–Protein interactions for RNA: ENST00000479428.3

RN7SL546P-201, Transcript of RNA, 7SL, cytoplasmic 546, pseudogene, humanhuman

BASIC

Gene RN7SL546P, Length 290 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL546P-201ENST00000479428 SPTLC2O15270 562 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 DKC1O60832 514 aaKnown RBP eCLIP12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 SLITRK3O94933 977 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 SPATA31C1P0DKV0 1188 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 NCLP19338 710 aaKnown RBP12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 RTP1P59025 263 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 KRT85P78386 507 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 PRKCEQ02156 737 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 GRIN1Q05586 938 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 CTTNQ14247 550 aaKnown RBP12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 TRIM60Q495X7 471 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 HAUS3Q68CZ6 603 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 POTEBQ6S5H4 581 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 ANKRD33Q7Z3H0 272 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 TPH2Q8IWU9 490 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 BBXQ8WY36 941 aaPredicted RBP12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 FAM167AQ96KS9 214 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 TOX2Q96NM4 488 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 POLR3CQ9BUI4 534 aaPredicted RBP12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 ZSWIM4Q9H7M6 989 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 SETD4Q9NVD3 440 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 WRAP73Q9P2S5 460 aaPredicted RBP12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 GTF2IRD1Q9UHL9 959 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 TRPC6Q9Y210 931 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 ATP11BQ9Y2G3 1177 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 STK24Q9Y6E0 443 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 WDR81Q562E7 1941 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 DNAH12Q6ZR08 3092 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 MROH7Q68CQ1 1323 aa12.11□□□□□ -0.47
RN7SL546P-201ENST00000479428 C17orf102A2RUQ5 167 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 HBP1O60381 514 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 B4GALT4O60513 344 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 PQBP1O60828 265 aaKnown RBP12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 PPP6R2O75170 966 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 MED24O75448 989 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 STBD1O95210 358 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 LYPLA2O95372 231 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 OATP04181 439 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 INSRRP14616 1297 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 RPA1P27694 616 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 CDC25AP30304 524 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 HOXC8P31273 242 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 LONP1P36776 959 aaKnown RBP12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 TLE2Q04725 743 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 PPFIA1Q13136 1202 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 HIC1Q14526 733 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 XKR3Q5GH77 459 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 KRT79Q5XKE5 535 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 GDF6Q6KF10 455 aaPredicted RBP12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 TRMT1LQ7Z2T5 733 aaKnown RBP12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 CATSPER3Q86XQ3 398 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 FAM126BQ8IXS8 530 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 C4orf19Q8IY42 314 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 KRI1Q8N9T8 703 aaKnown RBP12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 KCNG4Q8TDN1 519 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 SNX29Q8TEQ0 813 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 TNPO1Q92973 898 aaKnown RBP12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 AK8Q96MA6 479 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 CLIC6Q96NY7 704 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 MMTAG2Q9BU76 263 aaKnown RBP12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 CSRNP2Q9H175 543 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 TRPV6Q9H1D0 765 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 TUFT1Q9NNX1 390 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 NRBP2Q9NSY0 501 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 TRMT13Q9NUP7 481 aaKnown RBP12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 RCOR1Q9UKL0 485 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 NRCAMQ92823 1304 aa12.1□□□□□ -0.47
RN7SL546P-201ENST00000479428 RRN3P2A6NIE6 340 aa12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 DDX11L8A8MPP1 907 aa12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 DCDC2CA8MYV0 355 aa12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 TLR3O15455 904 aaKnown RBP12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 CD4P01730 458 aa12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 GNAT1P11488 350 aa12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 CCT6AP40227 531 aaKnown RBP12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 ADAM17P78536 824 aa12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 ZNF200P98182 395 aaPredicted RBP12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 GRIK4Q16099 956 aa12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 PTGISQ16647 500 aa12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 ZNF484Q5JVG2 852 aa12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 LEO1Q8WVC0 666 aaPredicted RBP12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 LMBR1Q8WVP7 490 aa12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 NIFKQ9BYG3 293 aaKnown RBP12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 ALPK3Q96L96 1907 aa12.09□□□□□ -0.47
RN7SL546P-201ENST00000479428 COL1A2P08123 1366 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 UNC80Q8N2C7 3258 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 TMEM150BA6NC51 233 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 ZBTB42B2RXF5 422 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 TREHO43280 583 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 CUTAO60888 179 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 MUTP22033 750 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 YWHABP31946 246 aaKnown RBP12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 UBA7P41226 1012 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 IGBP1P78318 339 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 FAAP100Q0VG06 881 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 ECM1Q16610 540 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 SPECC1Q5M775 1068 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 MARCH8Q5T0T0 291 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 POTEGQ6S5H5 508 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 ANO5Q75V66 913 aa12.08□□□□□ -0.48
RN7SL546P-201ENST00000479428 TRAPPC12Q8WVT3 735 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms