RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 KCNH2Q12809 1159 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 SF3B2Q13435 895 aaKnown RBP9.29□□□□□ -0.92
USP30-206ENST00000479219 NAB2Q15742 525 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 LRRC31Q6UY01 552 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 VPS36Q86VN1 386 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 SMCR8Q8TEV9 937 aaPredicted RBP9.29□□□□□ -0.92
USP30-206ENST00000479219 CHURC1Q8WUH1 139 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 CSRNP1Q96S65 589 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 REEP2Q9BRK0 252 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 CRACR2AQ9BSW2 395 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 ZHX3Q9H4I2 956 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 KCNQ5Q9NR82 932 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 TBC1D7Q9P0N9 293 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 HDAC9Q9UKV0 1011 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 MSH4O15457 936 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 GFPT2O94808 682 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 CACNB3P54284 484 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 GFPT1Q06210 699 aaPredicted RBP9.29□□□□□ -0.92
USP30-206ENST00000479219 RAPGEF1Q13905 1077 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 USH1GQ495M9 461 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 FOXR1Q6PIV2 292 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 WDR11Q9BZH6 1224 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 GANQ9H2C0 597 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 PRR12Q9ULL5 1215 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 TFR2Q9UP52 801 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 PCDHGC5Q9Y5F6 944 aa9.29□□□□□ -0.92
USP30-206ENST00000479219 RBBP6Q7Z6E9 1792 aaKnown RBP9.29□□□□□ -0.92
USP30-206ENST00000479219 FAM86B1E9PN63 330 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 GDF11O95390 407 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 FAM86B2P0C5J1 330 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 STAT3P40763 770 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 PABPC4Q13310 644 aaKnown RBP eCLIP9.28□□□□□ -0.92
USP30-206ENST00000479219 PPP2R5CQ13362 524 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 CCNI2Q6ZMN8 369 aaPredicted RBP9.28□□□□□ -0.92
USP30-206ENST00000479219 FAM160B2Q86V87 743 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 SFR1Q86XK3 245 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 SUGP1Q8IWZ8 645 aaKnown RBP9.28□□□□□ -0.92
USP30-206ENST00000479219 SPATA4Q8NEY3 305 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 NEK9Q8TD19 979 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 MYCBPQ99417 103 aaPredicted RBP9.28□□□□□ -0.92
USP30-206ENST00000479219 NCAPGQ9BPX3 1015 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 MKNK1Q9BUB5 465 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 MLXIPQ9HAP2 919 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 NLRC4Q9NPP4 1024 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 MRPL11Q9Y3B7 192 aaKnown RBP9.28□□□□□ -0.92
USP30-206ENST00000479219 FAM196BA6NMK8 535 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 GCOM1H8Y6P7 765 aaPredicted RBP9.28□□□□□ -0.92
USP30-206ENST00000479219 NKRFO15226 690 aaKnown RBP eCLIP9.28□□□□□ -0.92
USP30-206ENST00000479219 APBA3O96018 575 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 TFRCP02786 760 aaKnown RBP9.28□□□□□ -0.92
USP30-206ENST00000479219 POLR2MP0CAP2 368 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 NAP1L1P55209 391 aaKnown RBP9.28□□□□□ -0.92
USP30-206ENST00000479219 RASSF7Q02833 373 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 EXOC3L4Q17RC7 722 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 DNAJC21Q5F1R6 531 aaKnown RBP9.28□□□□□ -0.92
USP30-206ENST00000479219 FKBP1CQ5VVH2 108 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 EMBQ6PCB8 327 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 GBP6Q6ZN66 633 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 AFAP1L1Q8TED9 768 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 GJA10Q969M2 543 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 SPAG5Q96R06 1193 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 EIF2AK1Q9BQI3 630 aaKnown RBP9.28□□□□□ -0.92
USP30-206ENST00000479219 FAM204AQ9H8W3 233 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.28□□□□□ -0.92
USP30-206ENST00000479219 TMX2Q9Y320 296 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 TNS1Q9HBL0 1735 aaKnown RBP9.28□□□□□ -0.92
USP30-206ENST00000479219 MYH11P35749 1972 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 NPHP3-ACAD11A0A0J9YXS1 232 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 FLOT1O75955 427 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 NR3C1P04150 777 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 EPHB4P54760 987 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 NNTQ13423 1086 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.28□□□□□ -0.92
USP30-206ENST00000479219 TDRD3Q9H7E2 651 aaKnown RBP9.28□□□□□ -0.92
USP30-206ENST00000479219 INTUQ9ULD6 942 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 ODF2LQ9ULJ1 636 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 HPCAL4Q9UM19 191 aa9.28□□□□□ -0.92
USP30-206ENST00000479219 IGLV3-22A0A075B6J6 115 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 ZNF185O15231 689 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 TLR2O60603 784 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 PRKCIP41743 596 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 KLHDC7AQ5VTJ3 777 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 LRCH2Q5VUJ6 765 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 ZNF772Q68DY9 489 aaPredicted RBP9.27□□□□□ -0.93
USP30-206ENST00000479219 FAM151AQ8WW52 585 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 TBC1D5Q92609 795 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 SLC5A5Q92911 643 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 HSD17B14Q9BPX1 270 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 FGFBP2Q9BYJ0 223 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 BHMT2Q9H2M3 363 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 SUGCTQ9HAC7 445 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 STIM2Q9P246 746 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 A0A087WUV0 522 aaPredicted RBP9.27□□□□□ -0.93
USP30-206ENST00000479219 LRRIQ3A6PVS8 624 aaPredicted RBP9.27□□□□□ -0.93
USP30-206ENST00000479219 PDE2AO00408 941 aaPredicted RBP9.27□□□□□ -0.93
USP30-206ENST00000479219 OPLAHO14841 1288 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 TBC1D12O60347 775 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 RNF40O75150 1001 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 FAM13AO94988 1023 aa9.27□□□□□ -0.93
USP30-206ENST00000479219 CCDC172P0C7W6 258 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms