RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 CDC6Q99741 560 aa6.59□□□□□ -1.35
LMBR1-216ENST00000477983 PTPN22Q9Y2R2 807 aa6.59□□□□□ -1.35
LMBR1-216ENST00000477983 PRDM2Q13029 1718 aa6.59□□□□□ -1.36
LMBR1-216ENST00000477983 CYR61O00622 381 aa6.58□□□□□ -1.36
LMBR1-216ENST00000477983 PYGMP11217 842 aa6.58□□□□□ -1.36
LMBR1-216ENST00000477983 PDE6AP16499 860 aa6.58□□□□□ -1.36
LMBR1-216ENST00000477983 GDF5P43026 501 aa6.58□□□□□ -1.36
LMBR1-216ENST00000477983 GABREP78334 506 aa6.58□□□□□ -1.36
LMBR1-216ENST00000477983 FIGNQ5HY92 759 aa6.58□□□□□ -1.36
LMBR1-216ENST00000477983 C8orf37Q96NL8 207 aa6.58□□□□□ -1.36
LMBR1-216ENST00000477983 SCAND2PQ9GZW5 306 aaPredicted RBP6.58□□□□□ -1.36
LMBR1-216ENST00000477983 VPS11Q9H270 941 aa6.58□□□□□ -1.36
LMBR1-216ENST00000477983 RIC8BQ9NVN3 520 aa6.58□□□□□ -1.36
LMBR1-216ENST00000477983 PFDN2Q9UHV9 154 aa6.58□□□□□ -1.36
LMBR1-216ENST00000477983 CBLCQ9ULV8 474 aa6.58□□□□□ -1.36
LMBR1-216ENST00000477983 ZFR2Q9UPR6 939 aaKnown RBP6.58□□□□□ -1.36
LMBR1-216ENST00000477983 ATP23Q9Y6H3 246 aa6.58□□□□□ -1.36
LMBR1-216ENST00000477983 ESYT3A0FGR9 886 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 CCDC85CA6NKD9 419 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 GSTA4O15217 222 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 CLASP2O75122 1294 aaKnown RBP6.57□□□□□ -1.36
LMBR1-216ENST00000477983 AMHP03971 560 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 C4BPAP04003 597 aaKnown RBP6.57□□□□□ -1.36
LMBR1-216ENST00000477983 HERVK_113P62684 666 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 LACTBP83111 547 aaPredicted RBP6.57□□□□□ -1.36
LMBR1-216ENST00000477983 GUCY1A3Q02108 690 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 SSRP1Q08945 709 aaKnown RBP6.57□□□□□ -1.36
LMBR1-216ENST00000477983 HS1BP3Q53T59 392 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 SPDYAQ5MJ70 313 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 TAX1BP1Q86VP1 789 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 EDAQ92838 391 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 SCYL1Q96KG9 808 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 EXOC2Q96KP1 924 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 IPO9Q96P70 1041 aaKnown RBP6.57□□□□□ -1.36
LMBR1-216ENST00000477983 DHRS4Q9BTZ2 278 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 CATSPERZQ9NTU4 200 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 GALNT8Q9NY28 637 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 SIRPGQ9P1W8 387 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 NESP48681 1621 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 TOP2BQ02880 1626 aa6.57□□□□□ -1.36
LMBR1-216ENST00000477983 CUX1P39880 1505 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 RUSC2Q8N2Y8 1516 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 ZNF561-AS1K7EIQ3 104 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 FZD7O75084 574 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 CENPBP07199 599 aaPredicted RBP6.56□□□□□ -1.36
LMBR1-216ENST00000477983 FAM153BP0C7A2 387 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 PTGS1P23219 599 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 ETV4P43268 484 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 JAM2P57087 298 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 RAC3P60763 192 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 STILQ15468 1287 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 CRY1Q16526 586 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 ZMAT1Q5H9K5 638 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 GIMAP8Q8ND71 665 aaPredicted RBP6.56□□□□□ -1.36
LMBR1-216ENST00000477983 WNK4Q96J92 1243 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 LRRC37BQ96QE4 947 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 ZDHHC5Q9C0B5 715 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 BTBD7Q9P203 1132 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 ARHGAP28Q9P2N2 729 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 BIVM-ERCC5R4GMW8 1640 aa6.56□□□□□ -1.36
LMBR1-216ENST00000477983 FANCD2Q9BXW9 1451 aa6.55□□□□□ -1.36
LMBR1-216ENST00000477983 DIAPH1O60610 1272 aaKnown RBP6.55□□□□□ -1.36
LMBR1-216ENST00000477983 AOAHP28039 575 aa6.55□□□□□ -1.36
LMBR1-216ENST00000477983 GTF2F1P35269 517 aaKnown RBP eCLIP6.55□□□□□ -1.364e-12■■■■■ 37.4
LMBR1-216ENST00000477983 ST5P78524 1137 aa6.55□□□□□ -1.36
LMBR1-216ENST00000477983 NFYCQ13952 458 aa6.55□□□□□ -1.36
LMBR1-216ENST00000477983 PRKD1Q15139 912 aaPredicted RBP6.55□□□□□ -1.36
LMBR1-216ENST00000477983 RNF151Q2KHN1 245 aa6.55□□□□□ -1.36
LMBR1-216ENST00000477983 ZC3H12BQ5HYM0 836 aaKnown RBP6.55□□□□□ -1.36
LMBR1-216ENST00000477983 LRP10Q7Z4F1 713 aa6.55□□□□□ -1.36
LMBR1-216ENST00000477983 PTRH1Q86Y79 214 aaKnown RBP6.55□□□□□ -1.36
LMBR1-216ENST00000477983 HIRIP3Q9BW71 556 aaPredicted RBP6.55□□□□□ -1.36
LMBR1-216ENST00000477983 SMURF1Q9HCE7 757 aa6.55□□□□□ -1.36
LMBR1-216ENST00000477983 INCENPQ9NQS7 918 aa6.55□□□□□ -1.36
LMBR1-216ENST00000477983 FBXO10Q9UK96 956 aa6.55□□□□□ -1.36
LMBR1-216ENST00000477983 PCDHA9Q9Y5H5 950 aa6.55□□□□□ -1.36
LMBR1-216ENST00000477983 EEA1Q15075 1411 aa6.55□□□□□ -1.36
LMBR1-216ENST00000477983 SLPIP03973 132 aa6.54□□□□□ -1.36
LMBR1-216ENST00000477983 IL13RA1P78552 427 aa6.54□□□□□ -1.36
LMBR1-216ENST00000477983 SERINC3Q13530 473 aa6.54□□□□□ -1.36
LMBR1-216ENST00000477983 ZNF568Q3ZCX4 644 aa6.54□□□□□ -1.36
LMBR1-216ENST00000477983 FAM47CQ5HY64 1035 aa6.54□□□□□ -1.36
LMBR1-216ENST00000477983 AGBL4Q5VU57 503 aa6.54□□□□□ -1.36
LMBR1-216ENST00000477983 Q6ZSN1 163 aa6.54□□□□□ -1.36
LMBR1-216ENST00000477983 FUKQ8N0W3 1084 aa6.54□□□□□ -1.36
LMBR1-216ENST00000477983 ARMC5Q96C12 935 aa6.54□□□□□ -1.36
LMBR1-216ENST00000477983 BTBD2Q9BX70 525 aa6.54□□□□□ -1.36
LMBR1-216ENST00000477983 MRPS23Q9Y3D9 190 aaKnown RBP6.54□□□□□ -1.36
LMBR1-216ENST00000477983 LAMC3Q9Y6N6 1575 aa6.53□□□□□ -1.36
LMBR1-216ENST00000477983 RAD17O75943 681 aa6.53□□□□□ -1.36
LMBR1-216ENST00000477983 CRTAMO95727 393 aa6.53□□□□□ -1.36
LMBR1-216ENST00000477983 MPIG6BO95866 241 aa6.53□□□□□ -1.36
LMBR1-216ENST00000477983 SRGAP2CP0DJJ0 459 aa6.53□□□□□ -1.36
LMBR1-216ENST00000477983 CR2P20023 1033 aa6.53□□□□□ -1.36
LMBR1-216ENST00000477983 COMTP21964 271 aa6.53□□□□□ -1.36
LMBR1-216ENST00000477983 DUSP8Q13202 625 aa6.53□□□□□ -1.36
LMBR1-216ENST00000477983 EIF4HQ15056 248 aaKnown RBP6.53□□□□□ -1.36
LMBR1-216ENST00000477983 WDR72Q3MJ13 1102 aa6.53□□□□□ -1.36
LMBR1-216ENST00000477983 EP400NLQ6ZTU2 488 aa6.53□□□□□ -1.36
LMBR1-216ENST00000477983 USP51Q70EK9 711 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms