RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 UHMK1Q8TAS1 419 aaKnown RBP6.74□□□□□ -1.33
VPS50-214ENST00000477935 SH3TC2Q8TF17 1288 aa6.74□□□□□ -1.33
VPS50-214ENST00000477935 NOX5Q96PH1 765 aa6.74□□□□□ -1.33
VPS50-214ENST00000477935 SYT3Q9BQG1 590 aa6.74□□□□□ -1.33
VPS50-214ENST00000477935 YIPF4Q9BSR8 244 aa6.74□□□□□ -1.33
VPS50-214ENST00000477935 KANSL2Q9H9L4 492 aa6.74□□□□□ -1.33
VPS50-214ENST00000477935 DTLQ9NZJ0 730 aa6.74□□□□□ -1.33
VPS50-214ENST00000477935 PCDHA9Q9Y5H5 950 aa6.74□□□□□ -1.33
VPS50-214ENST00000477935 CASKIN1Q8WXD9 1431 aa6.74□□□□□ -1.33
VPS50-214ENST00000477935 CDC42BPAQ5VT25 1732 aa6.73□□□□□ -1.33
VPS50-214ENST00000477935 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.73□□□□□ -1.33
VPS50-214ENST00000477935 WNT9AO14904 365 aa6.73□□□□□ -1.33
VPS50-214ENST00000477935 STAT5AP42229 794 aa6.73□□□□□ -1.33
VPS50-214ENST00000477935 CR1LQ2VPA4 569 aa6.73□□□□□ -1.33
VPS50-214ENST00000477935 VWA3BQ502W6 1294 aa6.73□□□□□ -1.33
VPS50-214ENST00000477935 LINC01356Q8N9X3 169 aa6.73□□□□□ -1.33
VPS50-214ENST00000477935 SLC7A14Q8TBB6 771 aa6.73□□□□□ -1.33
VPS50-214ENST00000477935 TOE1Q96GM8 510 aaKnown RBP6.73□□□□□ -1.33
VPS50-214ENST00000477935 GORASP1Q9BQQ3 440 aa6.73□□□□□ -1.33
VPS50-214ENST00000477935 MRPL4Q9BYD3 311 aaKnown RBP6.73□□□□□ -1.33
VPS50-214ENST00000477935 NCOA5Q9HCD5 579 aaKnown RBP6.73□□□□□ -1.33
VPS50-214ENST00000477935 NGRNQ9NPE2 291 aaKnown RBP6.73□□□□□ -1.33
VPS50-214ENST00000477935 SFMBT1Q9UHJ3 866 aa6.73□□□□□ -1.33
VPS50-214ENST00000477935 TET3O43151 1660 aa6.73□□□□□ -1.33
VPS50-214ENST00000477935 ARHGAP31Q2M1Z3 1444 aa6.73□□□□□ -1.33
VPS50-214ENST00000477935 ZNF644Q9H582 1327 aaPredicted RBP6.73□□□□□ -1.33
VPS50-214ENST00000477935 UBR1Q8IWV7 1749 aa6.73□□□□□ -1.33
VPS50-214ENST00000477935 CAMSAP2Q08AD1 1489 aa6.73□□□□□ -1.33
VPS50-214ENST00000477935 ARHGAP35Q9NRY4 1499 aa6.73□□□□□ -1.33
VPS50-214ENST00000477935 NHSL1Q5SYE7 1610 aa6.72□□□□□ -1.33
VPS50-214ENST00000477935 FFAR3O14843 346 aa6.72□□□□□ -1.33
VPS50-214ENST00000477935 NKX3-2P78367 333 aa6.72□□□□□ -1.33
VPS50-214ENST00000477935 IDI1Q13907 227 aa6.72□□□□□ -1.33
VPS50-214ENST00000477935 SAPCD2Q86UD0 394 aa6.72□□□□□ -1.33
VPS50-214ENST00000477935 TRIM48Q8IWZ4 208 aa6.72□□□□□ -1.33
VPS50-214ENST00000477935 RBM12BQ8IXT5 1001 aaKnown RBP6.72□□□□□ -1.33
VPS50-214ENST00000477935 PCDH19Q8TAB3 1148 aa6.72□□□□□ -1.33
VPS50-214ENST00000477935 CLEC4DQ8WXI8 215 aa6.72□□□□□ -1.33
VPS50-214ENST00000477935 ZBTB8AQ96BR9 441 aa6.72□□□□□ -1.33
VPS50-214ENST00000477935 DSEQ9UL01 958 aa6.72□□□□□ -1.33
VPS50-214ENST00000477935 PNPLA6Q8IY17 1366 aa6.71□□□□□ -1.33
VPS50-214ENST00000477935 DIP2AQ14689 1571 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 ATRNO75882 1429 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 PTCH1Q13635 1447 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 TCRBV5S4A2TA0A5A2 114 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 KCNQ2O43526 872 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 RASGRP1O95267 797 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 LTFP02788 710 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 SRGAP2CP0DJJ0 459 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 PYGMP11217 842 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 C1QTNF8P60827 252 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 DLX2Q07687 328 aaPredicted RBP6.71□□□□□ -1.34
VPS50-214ENST00000477935 SMAD4Q13485 552 aaKnown RBP6.71□□□□□ -1.34
VPS50-214ENST00000477935 TEPPQ6URK8 271 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 ZC3H7AQ8IWR0 971 aaKnown RBP6.71□□□□□ -1.34
VPS50-214ENST00000477935 LINC00482Q8N8I6 264 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 TTLL11Q8NHH1 800 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 ZNF526Q8TF50 670 aaPredicted RBP6.71□□□□□ -1.34
VPS50-214ENST00000477935 FBXW5Q969U6 566 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 C11orf84Q9BUA3 381 aaPredicted RBP6.71□□□□□ -1.34
VPS50-214ENST00000477935 PCDH18Q9HCL0 1135 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 CATSPERZQ9NTU4 200 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 SLC52A1Q9NWF4 448 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 USP35Q9P2H5 1018 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 NUB1Q9Y5A7 615 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 MROH1Q8NDA8 1641 aa6.71□□□□□ -1.34
VPS50-214ENST00000477935 PIK3R4Q99570 1358 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 PLD2O14939 933 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 TRIM13O60858 407 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 LRG1P02750 347 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 ITGA1P56199 1179 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 ST5P78524 1137 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 TUSC3Q13454 348 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 KCTD1Q719H9 257 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 BRAPQ7Z569 592 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 STK32CQ86UX6 486 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 TP53I13Q8NBR0 393 aaPredicted RBP6.7□□□□□ -1.34
VPS50-214ENST00000477935 SH3RF2Q8TEC5 729 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 SCLYQ96I15 445 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 TMEM260Q9NX78 707 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 CBLCQ9ULV8 474 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 TELO2Q9Y4R8 837 aa6.7□□□□□ -1.34
VPS50-214ENST00000477935 KDM5AP29375 1690 aaKnown RBP6.7□□□□□ -1.34
VPS50-214ENST00000477935 MTUS2Q5JR59 1369 aa6.69□□□□□ -1.34
VPS50-214ENST00000477935 DCCP43146 1447 aa6.69□□□□□ -1.34
VPS50-214ENST00000477935 CCDC66A2RUB6 948 aa6.69□□□□□ -1.34
VPS50-214ENST00000477935 SH3D21A4FU49 640 aa6.69□□□□□ -1.34
VPS50-214ENST00000477935 BMP7P18075 431 aa6.69□□□□□ -1.34
VPS50-214ENST00000477935 EPHA5P54756 1037 aa6.69□□□□□ -1.34
VPS50-214ENST00000477935 GRIN1Q05586 938 aa6.69□□□□□ -1.34
VPS50-214ENST00000477935 GPR19Q15760 415 aa6.69□□□□□ -1.34
VPS50-214ENST00000477935 FAM47CQ5HY64 1035 aa6.69□□□□□ -1.34
VPS50-214ENST00000477935 C16orf59Q7L2K0 433 aa6.69□□□□□ -1.34
VPS50-214ENST00000477935 FGD2Q7Z6J4 655 aa6.69□□□□□ -1.34
VPS50-214ENST00000477935 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.69□□□□□ -1.34
VPS50-214ENST00000477935 ADGRG2Q8IZP9 1017 aa6.69□□□□□ -1.34
VPS50-214ENST00000477935 KYQ8NBH2 561 aa6.69□□□□□ -1.34
VPS50-214ENST00000477935 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.69□□□□□ -1.34
VPS50-214ENST00000477935 MAGEB10Q96LZ2 347 aaPredicted RBP6.69□□□□□ -1.34
VPS50-214ENST00000477935 TRIM39Q9HCM9 518 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms