RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 SLC27A3Q5K4L6 730 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 OTUD6AQ7L8S5 288 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 MCF2L2Q86YR7 1114 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 IFNLR1Q8IU57 520 aaPredicted RBP12□□□□□ -0.49
COL27A1-204ENST00000477421 SPATA4Q8NEY3 305 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 PRMT6Q96LA8 375 aaPredicted RBP12□□□□□ -0.49
COL27A1-204ENST00000477421 PNKPQ96T60 521 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 RMDN3Q96TC7 470 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 SEMA6BQ9H3T3 888 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 DNAJC17Q9NVM6 304 aaKnown RBP12□□□□□ -0.49
COL27A1-204ENST00000477421 PRR12Q9ULL5 1215 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 DESP17661 470 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 GAP43P17677 238 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 POLGP54098 1239 aaPredicted RBP11.99□□□□□ -0.49
COL27A1-204ENST00000477421 UAP1Q16222 522 aaPredicted RBP11.99□□□□□ -0.49
COL27A1-204ENST00000477421 PADI6Q6TGC4 694 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 PRDM16Q9HAZ2 1276 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 LRRC4BQ9NT99 713 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 STIM2Q9P246 746 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 CHORDC1Q9UHD1 332 aaPredicted RBP11.99□□□□□ -0.49
COL27A1-204ENST00000477421 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.99□□□□□ -0.49
COL27A1-204ENST00000477421 CEP83Q9Y592 693 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 BZW2Q9Y6E2 419 aaKnown RBP11.99□□□□□ -0.49
COL27A1-204ENST00000477421 BAG6P46379 1132 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 SLCO1A2P46721 670 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 LIG3P49916 1009 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 PROM2Q8N271 834 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 PAF1Q8N7H5 531 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 COG1Q8WTW3 980 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 FAM20AQ96MK3 541 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 LXNQ9BS40 222 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 TMEM39BQ9GZU3 492 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 KMT5AQ9NQR1 393 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 PDS5AQ29RF7 1337 aaKnown RBP11.99□□□□□ -0.49
COL27A1-204ENST00000477421 PGRMC1O00264 195 aaKnown RBP11.99□□□□□ -0.49
COL27A1-204ENST00000477421 ADAMTS3O15072 1205 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 FGGP02679 453 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 USP11P51784 963 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 FUT2Q10981 343 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 KAZNQ674X7 775 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 KCNK18Q7Z418 384 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 LDHDQ86WU2 507 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 NCAPG2Q86XI2 1143 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 CEP57Q86XR8 500 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 ZNF384Q8TF68 577 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 ZNF653Q96CK0 615 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 AZI2Q9H6S1 392 aa11.99□□□□□ -0.49
COL27A1-204ENST00000477421 TMOD1P28289 359 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 USP14P54578 494 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 EPHB4P54760 987 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 OSTNP61366 133 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 IRX3P78415 501 aaPredicted RBP11.98□□□□□ -0.49
COL27A1-204ENST00000477421 NAALADL2Q58DX5 795 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 PDXDC1Q6P996 788 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 GJB7Q6PEY0 223 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 RUFY4Q6ZNE9 571 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 CATSPER3Q86XQ3 398 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 FMNL3Q8IVF7 1028 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 CNPY4Q8N129 248 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 GOLGA5Q8TBA6 731 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 SAAL1Q96ER3 474 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 CABS1Q96KC9 395 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 PPP1R16BQ96T49 567 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 C1orf112Q9NSG2 853 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 AGTPBP1Q9UPW5 1226 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 ITIH6Q6UXX5 1313 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 MED1Q15648 1581 aaPredicted RBP11.98□□□□□ -0.49
COL27A1-204ENST00000477421 ATF7P17544 494 aaPredicted RBP11.98□□□□□ -0.49
COL27A1-204ENST00000477421 IFNAR2P48551 515 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 IGBP1P78318 339 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 MTMR1Q13613 665 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 TRIP13Q15645 432 aaPredicted RBP11.98□□□□□ -0.49
COL27A1-204ENST00000477421 NT5DC1Q5TFE4 455 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 COL23A1Q86Y22 540 aaPredicted RBP11.98□□□□□ -0.49
COL27A1-204ENST00000477421 ANKRD42Q8N9B4 389 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 CCDC77Q9BR77 488 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 IKBKGQ9Y6K9 419 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 SLIT3O75094 1523 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 NT5C2P49902 561 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 PDE6CP51160 858 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 DDR1Q08345 913 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 DRAP1Q14919 205 aaPredicted RBP11.98□□□□□ -0.49
COL27A1-204ENST00000477421 GNPTABQ3T906 1256 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 CEP55Q53EZ4 464 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 STRIP1Q5VSL9 837 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 KIAA0895Q8NCT3 520 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 CEP63Q96MT8 703 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 CAPN6Q9Y6Q1 641 aa11.98□□□□□ -0.49
COL27A1-204ENST00000477421 MED24O75448 989 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 LMNB1P20700 586 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 DHX9Q08211 1270 aaKnown RBP11.97□□□□□ -0.49
COL27A1-204ENST00000477421 E2F4Q16254 413 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 TMCO4Q5TGY1 634 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 ELOA2Q8IYF1 753 aaPredicted RBP11.97□□□□□ -0.49
COL27A1-204ENST00000477421 SNX12Q9UMY4 172 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 FHOD1Q9Y613 1164 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 MRC1P22897 1456 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 RNF225M0QZC1 329 aaPredicted RBP11.97□□□□□ -0.49
COL27A1-204ENST00000477421 INPP5BP32019 993 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 PSMC6P62333 389 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms