RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 SAMM50Q9Y512 469 aa13.93□□□□□ -0.18
CLCNKA-205ENST00000477360 KDM3AQ9Y4C1 1321 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 ABHD14A-ACY1A0A1B0GW23 586 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 DDX39AO00148 427 aaKnown RBP13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 PDIA4P13667 645 aaKnown RBP13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 PDCP20941 246 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 THPOP40225 353 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 XKR3Q5GH77 459 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 EARS2Q5JPH6 523 aaKnown RBP13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 IER5Q5VY09 327 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 CNKSR3Q6P9H4 555 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 MIER3Q7Z3K6 550 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 EXOC8Q8IYI6 725 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 NEK9Q8TD19 979 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 HAS1Q92839 578 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 MTMR9Q96QG7 549 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 NIFKQ9BYG3 293 aaKnown RBP13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 UNC45AQ9H3U1 944 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 VAV3Q9UKW4 847 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 NOL7Q9UMY1 257 aaKnown RBP13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 SMC3Q9UQE7 1217 aa13.92□□□□□ -0.18
CLCNKA-205ENST00000477360 TANC1Q9C0D5 1861 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 LAD1O00515 517 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 NEMFO60524 1076 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 OATP04181 439 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 ATP4AP20648 1035 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 MARK3P27448 753 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 PSMC5P62195 406 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 ZNF200P98182 395 aaPredicted RBP13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 CDC42EP1Q00587 391 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 GNL2Q13823 731 aaKnown RBP13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 EPHA7Q15375 998 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 ZNF618Q5T7W0 954 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 HSCBQ8IWL3 235 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 APBB2Q92870 758 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 SCLYQ96I15 445 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 SLC9A7Q96T83 725 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 GABBR1Q9UBS5 961 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 PCDHA12Q9UN75 941 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 DOCK5Q9H7D0 1870 aa13.91□□□□□ -0.18
CLCNKA-205ENST00000477360 LAMA3Q16787 3333 aa13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 ZBTB42B2RXF5 422 aa13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 MARCH6O60337 910 aa13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 P4HBP07237 508 aaKnown RBP13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 QARSP47897 775 aaKnown RBP13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 SPIRE1Q08AE8 756 aa13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 GPNMBQ14956 572 aa13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 CALCRLQ16602 461 aa13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 PLEKHG4Q58EX7 1191 aa13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 RILPL1Q5EBL4 403 aa13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 MTHFD1LQ6UB35 978 aa13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 POTEDQ86YR6 584 aa13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 CKAP2LQ8IYA6 745 aa13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 WNT8BQ93098 351 aa13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 JPH2Q9BR39 696 aaPredicted RBP13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 STK24Q9Y6E0 443 aa13.9□□□□□ -0.18
CLCNKA-205ENST00000477360 FAM205CA6NFA0 338 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 ZNF862O60290 1169 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 NBNO60934 754 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 LYPLA2O95372 231 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 ACRP10323 421 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 MUTP22033 750 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 TMOD1P28289 359 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 GJB2P29033 226 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 PRKCEQ02156 737 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 MGAT3Q09327 533 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 IKBKEQ14164 716 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 MBTPS1Q14703 1052 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 TARBP2Q15633 366 aaKnown RBP13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 RAB30Q15771 203 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 C4orf19Q8IY42 314 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 PPP1R13LQ8WUF5 828 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 SEPT8Q92599 483 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 SLC4A7Q9Y6M7 1214 aa13.89□□□□□ -0.19
CLCNKA-205ENST00000477360 H3BQV1 296 aa13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 M0QZ92 97 aa13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 C22orf31O95567 290 aa13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 XRCC6P12956 609 aaKnown RBP eCLIP13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 KLRC1P26715 233 aa13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 MRPS6P82932 125 aaKnown RBP13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 GUCY1B3Q02153 619 aa13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 MKRN4PQ13434 485 aaPredicted RBP13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 ODR4Q5SWX8 454 aa13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 OTOP2Q7RTS6 562 aa13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 KCTD17Q8N5Z5 321 aa13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 HSD17B14Q9BPX1 270 aa13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 FTOQ9C0B1 505 aaKnown RBP eCLIP13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 ZSWIM4Q9H7M6 989 aa13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 TTC12Q9H892 705 aaPredicted RBP13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 TSHZ2Q9NRE2 1034 aa13.88□□□□□ -0.19
CLCNKA-205ENST00000477360 KAT6AQ92794 2004 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 IGKV6-21A0A0C4DH24 114 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 SOX1O00570 391 aaPredicted RBP13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 CHMP2AO43633 222 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 GAS2O43903 313 aaKnown RBP13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 DTNBO60941 627 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 STBD1O95210 358 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 CHRNA1P02708 482 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 PRPHP41219 470 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 KCNJ6P48051 423 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms