RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 MLXIPQ9HAP2 919 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 RTEL1Q9NZ71 1219 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 MUC6Q6W4X9 2439 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 FRMPD4Q14CM0 1322 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 TTC3P53804 2025 aa12.08□□□□□ -0.48
CALD1-217ENST00000475772 LOXHD1Q8IVV2 1947 aa12.07□□□□□ -0.48
CALD1-217ENST00000475772 PNMA6FA0A0J9YX94 578 aa12.07□□□□□ -0.48
CALD1-217ENST00000475772 SPATA31C2B4DYI2 1134 aa12.07□□□□□ -0.48
CALD1-217ENST00000475772 LINC00271P0C7V0 271 aa12.07□□□□□ -0.48
CALD1-217ENST00000475772 CCND2P30279 289 aa12.07□□□□□ -0.48
CALD1-217ENST00000475772 PTPRNQ16849 979 aa12.07□□□□□ -0.48
CALD1-217ENST00000475772 EPC2Q52LR7 807 aa12.07□□□□□ -0.48
CALD1-217ENST00000475772 LYPD8Q6UX82 237 aa12.07□□□□□ -0.48
CALD1-217ENST00000475772 CYFIP1Q7L576 1253 aa12.07□□□□□ -0.48
CALD1-217ENST00000475772 NEK9Q8TD19 979 aa12.07□□□□□ -0.48
CALD1-217ENST00000475772 IGDCC4Q8TDY8 1250 aa12.07□□□□□ -0.48
CALD1-217ENST00000475772 INPP4AQ96PE3 977 aaPredicted RBP12.07□□□□□ -0.48
CALD1-217ENST00000475772 GPR20Q99678 358 aa12.07□□□□□ -0.48
CALD1-217ENST00000475772 SETD4Q9NVD3 440 aa12.07□□□□□ -0.48
CALD1-217ENST00000475772 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
CALD1-217ENST00000475772 EMSYQ7Z589 1322 aa12.07□□□□□ -0.48
CALD1-217ENST00000475772 FAM86C2PA6NEL3 165 aa12.06□□□□□ -0.48
CALD1-217ENST00000475772 H3BNC9 293 aa12.06□□□□□ -0.48
CALD1-217ENST00000475772 MEIS2O14770 477 aa12.06□□□□□ -0.48
CALD1-217ENST00000475772 AMHP03971 560 aa12.06□□□□□ -0.48
CALD1-217ENST00000475772 KCNA5P22460 613 aa12.06□□□□□ -0.48
CALD1-217ENST00000475772 SLC19A1P41440 591 aa12.06□□□□□ -0.48
CALD1-217ENST00000475772 ANTXR2P58335 489 aa12.06□□□□□ -0.48
CALD1-217ENST00000475772 COL9A3Q14050 684 aaPredicted RBP12.06□□□□□ -0.48
CALD1-217ENST00000475772 FAM26DQ5JW98 314 aa12.06□□□□□ -0.48
CALD1-217ENST00000475772 TMEM31Q5JXX7 168 aa12.06□□□□□ -0.48
CALD1-217ENST00000475772 METTL7BQ6UX53 244 aa12.06□□□□□ -0.48
CALD1-217ENST00000475772 TRIM50Q86XT4 487 aa12.06□□□□□ -0.48
CALD1-217ENST00000475772 USP26Q9BXU7 913 aa12.06□□□□□ -0.48
CALD1-217ENST00000475772 RALGAPA2Q2PPJ7 1873 aa12.06□□□□□ -0.48
CALD1-217ENST00000475772 TRIOO75962 3097 aa12.05□□□□□ -0.48
CALD1-217ENST00000475772 E7EWF7 191 aa12.05□□□□□ -0.48
CALD1-217ENST00000475772 IFIT3O14879 490 aaKnown RBP12.05□□□□□ -0.48
CALD1-217ENST00000475772 ATP9AO75110 1047 aa12.05□□□□□ -0.48
CALD1-217ENST00000475772 UPP2O95045 317 aa12.05□□□□□ -0.48
CALD1-217ENST00000475772 CHRNA1P02708 482 aa12.05□□□□□ -0.48
CALD1-217ENST00000475772 CTSHP09668 335 aa12.05□□□□□ -0.48
CALD1-217ENST00000475772 TTC22Q5TAA0 569 aa12.05□□□□□ -0.48
CALD1-217ENST00000475772 USP17L6PQ6QN14 398 aa12.05□□□□□ -0.48
CALD1-217ENST00000475772 TMEM192Q8IY95 271 aa12.05□□□□□ -0.48
CALD1-217ENST00000475772 MRPL38Q96DV4 380 aaKnown RBP12.05□□□□□ -0.48
CALD1-217ENST00000475772 CCNYL3P0C7X3 344 aa12.04□□□□□ -0.48
CALD1-217ENST00000475772 CHMLP26374 656 aa12.04□□□□□ -0.48
CALD1-217ENST00000475772 GPM6BQ13491 265 aa12.04□□□□□ -0.48
CALD1-217ENST00000475772 NEDD9Q14511 834 aa12.04□□□□□ -0.48
CALD1-217ENST00000475772 COL19A1Q14993 1142 aa12.04□□□□□ -0.48
CALD1-217ENST00000475772 WTAPQ15007 396 aa12.04□□□□□ -0.48
CALD1-217ENST00000475772 TCEAL5Q5H9L2 206 aa12.04□□□□□ -0.48
CALD1-217ENST00000475772 UTP14CQ5TAP6 766 aaKnown RBP12.04□□□□□ -0.48
CALD1-217ENST00000475772 PTCRAQ6ISU1 281 aaPredicted RBP12.04□□□□□ -0.48
CALD1-217ENST00000475772 RUFY4Q6ZNE9 571 aa12.04□□□□□ -0.48
CALD1-217ENST00000475772 GJD3Q8N144 294 aa12.04□□□□□ -0.48
CALD1-217ENST00000475772 PIBF1Q8WXW3 757 aa12.04□□□□□ -0.48
CALD1-217ENST00000475772 SEPT8Q92599 483 aa12.04□□□□□ -0.48
CALD1-217ENST00000475772 EHMT1Q9H9B1 1298 aa12.04□□□□□ -0.48
CALD1-217ENST00000475772 EVA1BQ9NVM1 165 aa12.04□□□□□ -0.48
CALD1-217ENST00000475772 WDFY4Q6ZS81 3184 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 GSTTP1A0A1W2PQM5 241 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 H3BQ06 376 aaPredicted RBP12.03□□□□□ -0.48
CALD1-217ENST00000475772 NOP56O00567 594 aaKnown RBP12.03□□□□□ -0.48
CALD1-217ENST00000475772 FIBPO43427 364 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 CAND2O75155 1236 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 STAM2O75886 525 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 LTBRP36941 435 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 RFC5P40937 340 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 RPIAP49247 311 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 MGAT3Q09327 533 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 TRDNQ13061 729 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 GNPTABQ3T906 1256 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 PCNX4Q63HM2 1172 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 MB21D2Q8IYB1 491 aaPredicted RBP12.03□□□□□ -0.48
CALD1-217ENST00000475772 BANK1Q8NDB2 785 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 NCOA7Q8NI08 942 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 LMBR1Q8WVP7 490 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 TSC1Q92574 1164 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 SAMD11Q96NU1 681 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 SENP7Q9BQF6 1050 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 RC3H2Q9HBD1 1191 aaKnown RBP12.03□□□□□ -0.48
CALD1-217ENST00000475772 COL4A6Q14031 1691 aa12.03□□□□□ -0.48
CALD1-217ENST00000475772 PIEZO1Q92508 2521 aa12.02□□□□□ -0.48
CALD1-217ENST00000475772 PIK3CDO00329 1044 aa12.02□□□□□ -0.49
CALD1-217ENST00000475772 ENPP3O14638 875 aa12.02□□□□□ -0.49
CALD1-217ENST00000475772 KCNA2P16389 499 aa12.02□□□□□ -0.49
CALD1-217ENST00000475772 ARHGAP4P98171 946 aa12.02□□□□□ -0.49
CALD1-217ENST00000475772 TRAF1Q13077 416 aa12.02□□□□□ -0.49
CALD1-217ENST00000475772 MARCH8Q5T0T0 291 aa12.02□□□□□ -0.49
CALD1-217ENST00000475772 RPAINQ86UA6 219 aa12.02□□□□□ -0.49
CALD1-217ENST00000475772 RTN4RL1Q86UN2 441 aaPredicted RBP12.02□□□□□ -0.49
CALD1-217ENST00000475772 SRBD1Q8N5C6 995 aaKnown RBP12.02□□□□□ -0.49
CALD1-217ENST00000475772 MAP4K1Q92918 833 aa12.02□□□□□ -0.49
CALD1-217ENST00000475772 ZNF689Q96CS4 500 aaPredicted RBP12.02□□□□□ -0.49
CALD1-217ENST00000475772 PABPC5Q96DU9 382 aaKnown RBP12.02□□□□□ -0.49
CALD1-217ENST00000475772 YME1L1Q96TA2 773 aa12.02□□□□□ -0.49
CALD1-217ENST00000475772 MYL10Q9BUA6 226 aa12.02□□□□□ -0.49
CALD1-217ENST00000475772 IFIH1Q9BYX4 1025 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms