RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 PQBP1O60828 265 aaKnown RBP7.87□□□□□ -1.15
SHQ1-207ENST00000475558 RGS20O76081 388 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 PGK1P00558 417 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 NR3C2P08235 984 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 XRCC6P12956 609 aaKnown RBP eCLIP7.87□□□□□ -1.15
SHQ1-207ENST00000475558 AKR1A1P14550 325 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 PFKFB1P16118 471 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 SFNP31947 248 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 PPP1R2P41236 205 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 TXKP42681 527 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 NDUFA8P51970 172 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 SNAP25P60880 206 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 FAAP100Q0VG06 881 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 UVSSAQ2YD98 709 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 ZSCAN23Q3MJ62 389 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 PPP1R15BQ5SWA1 713 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 L1TD1Q5T7N2 865 aaKnown RBP7.87□□□□□ -1.15
SHQ1-207ENST00000475558 SHC4Q6S5L8 630 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 LRSAM1Q6UWE0 723 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 NSMFQ6X4W1 530 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 KRBA2Q6ZNG9 492 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 ANKRD33Q7Z3H0 272 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 PLA2G4DQ86XP0 818 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 MSL3Q8N5Y2 521 aaKnown RBP7.87□□□□□ -1.15
SHQ1-207ENST00000475558 TRIML1Q8N9V2 468 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 USP38Q8NB14 1042 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 RASSF8Q8NHQ8 419 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 NEK9Q8TD19 979 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 ANP32BQ92688 251 aaKnown RBP7.87□□□□□ -1.15
SHQ1-207ENST00000475558 GPRASP2Q96D09 838 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 CDK5RAP3Q96JB5 506 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 MMP19Q99542 508 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 SENP7Q9BQF6 1050 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 TINF2Q9BSI4 451 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 IRX2Q9BZI1 471 aaPredicted RBP7.87□□□□□ -1.15
SHQ1-207ENST00000475558 TTC12Q9H892 705 aaPredicted RBP7.87□□□□□ -1.15
SHQ1-207ENST00000475558 KCNMB3Q9NPA1 279 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 ANO10Q9NW15 660 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 RMND1Q9NWS8 449 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 CYP39A1Q9NYL5 469 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 STK17AQ9UEE5 414 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 DACH1Q9UI36 760 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 KCNG1Q9UIX4 513 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 GREB1LQ9C091 1923 aaPredicted RBP7.87□□□□□ -1.15
SHQ1-207ENST00000475558 CDH23Q9H251 3354 aa7.87□□□□□ -1.15
SHQ1-207ENST00000475558 GOLGA6L3A6NEY3 463 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 MOXD2PA6NHM9 499 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 POLR2DO15514 142 aaKnown RBP7.86□□□□□ -1.15
SHQ1-207ENST00000475558 NR1I2O75469 434 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 TIMP1P01033 207 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 HOXA13P31271 388 aaPredicted RBP7.86□□□□□ -1.15
SHQ1-207ENST00000475558 TECP42680 631 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 ACLYP53396 1101 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 PPIGQ13427 754 aaKnown RBP eCLIP7.86□□□□□ -1.15
SHQ1-207ENST00000475558 ZNF792Q3KQV3 632 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 PRR16Q569H4 304 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 MFSD5Q6N075 450 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 RBM43Q6ZSC3 357 aaKnown RBP7.86□□□□□ -1.15
SHQ1-207ENST00000475558 SV2BQ7L1I2 683 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 CABP7Q86V35 215 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 TBC1D5Q92609 795 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 SLC5A5Q92911 643 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 ASB2Q96Q27 587 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 GSDMAQ96QA5 445 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 PDCD2LQ9BRP1 358 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 ZNF577Q9BSK1 485 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 POLR3CQ9BUI4 534 aaPredicted RBP7.86□□□□□ -1.15
SHQ1-207ENST00000475558 TUFT1Q9NNX1 390 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 STARD7Q9NQZ5 370 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 PXMP2Q9NR77 195 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 KIAA1468Q9P260 1216 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 FAM184BQ9ULE4 1060 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 DNM3Q9UQ16 869 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 UBIAD1Q9Y5Z9 338 aa7.86□□□□□ -1.15
SHQ1-207ENST00000475558 FRMPD4Q14CM0 1322 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 MROH7Q68CQ1 1323 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 IPO5O00410 1097 aaKnown RBP7.85□□□□□ -1.15
SHQ1-207ENST00000475558 NFIBO00712 420 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 ADAMTS4O75173 837 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 ZNF865P0CJ78 1059 aaPredicted RBP7.85□□□□□ -1.15
SHQ1-207ENST00000475558 LIG1P18858 919 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 RPA1P27694 616 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 ICAM3P32942 547 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 MRPS5P82675 430 aaKnown RBP7.85□□□□□ -1.15
SHQ1-207ENST00000475558 KRT76Q01546 638 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 PPP2R5CQ13362 524 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 MTMR1Q13613 665 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 NEDD9Q14511 834 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 PGM5Q15124 567 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 EPHA7Q15375 998 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 MUM1L1Q5H9M0 696 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 HYIQ5T013 277 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 EXOC8Q8IYI6 725 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 TMEM199Q8N511 208 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 MLKLQ8NB16 471 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 PPM1EQ8WY54 764 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 HAS1Q92839 578 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 GLT1D1Q96MS3 346 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 CLIC6Q96NY7 704 aa7.85□□□□□ -1.15
SHQ1-207ENST00000475558 NACC1Q96RE7 527 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms