RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 KRT85P78386 507 aa17.67■□□□□ 0.42
CPSF3-203ENST00000475482 ADGRE1Q14246 886 aa17.67■□□□□ 0.42
CPSF3-203ENST00000475482 MARCH8Q5T0T0 291 aa17.67■□□□□ 0.42
CPSF3-203ENST00000475482 TAF2Q6P1X5 1199 aa17.67■□□□□ 0.42
CPSF3-203ENST00000475482 PLPPR4Q7Z2D5 763 aa17.67■□□□□ 0.42
CPSF3-203ENST00000475482 CCDC148Q8NFR7 591 aa17.67■□□□□ 0.42
CPSF3-203ENST00000475482 BICD2Q8TD16 824 aa17.67■□□□□ 0.42
CPSF3-203ENST00000475482 OSBPL7Q9BZF2 842 aa17.67■□□□□ 0.42
CPSF3-203ENST00000475482 PRDM12Q9H4Q4 367 aa17.67■□□□□ 0.42
CPSF3-203ENST00000475482 VPS54Q9P1Q0 977 aa17.67■□□□□ 0.42
CPSF3-203ENST00000475482 MYH9P35579 1960 aaKnown RBP17.66■□□□□ 0.42
CPSF3-203ENST00000475482 CCNE2O96020 404 aa17.66■□□□□ 0.42
CPSF3-203ENST00000475482 FOSBP53539 338 aa17.66■□□□□ 0.42
CPSF3-203ENST00000475482 PPFIA1Q13136 1202 aa17.66■□□□□ 0.42
CPSF3-203ENST00000475482 IKBKEQ14164 716 aa17.66■□□□□ 0.42
CPSF3-203ENST00000475482 GRIK4Q16099 956 aa17.66■□□□□ 0.42
CPSF3-203ENST00000475482 KRT40Q6A162 431 aa17.66■□□□□ 0.42
CPSF3-203ENST00000475482 ABHD15Q6UXT9 468 aa17.66■□□□□ 0.42
CPSF3-203ENST00000475482 PLA2G4DQ86XP0 818 aa17.66■□□□□ 0.42
CPSF3-203ENST00000475482 DBF4BQ8NFT6 615 aa17.66■□□□□ 0.42
CPSF3-203ENST00000475482 GLG1Q92896 1179 aa17.66■□□□□ 0.42
CPSF3-203ENST00000475482 ZNF396Q96N95 335 aaPredicted RBP17.66■□□□□ 0.42
CPSF3-203ENST00000475482 CFAP45Q9UL16 551 aa17.66■□□□□ 0.42
CPSF3-203ENST00000475482 RBAK-RBAKDNI3L0D1 243 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 M0R2N6 131 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 CA3P07451 260 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 ZNF76P36508 570 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 KCNJ6P48051 423 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 STAT5BP51692 787 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 DEFB103AP81534 67 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 SETQ01105 290 aaPredicted RBP17.65■□□□□ 0.42
CPSF3-203ENST00000475482 GUCY1B3Q02153 619 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 RESTQ13127 1097 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 NPY5RQ15761 445 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 PPP2R2DQ66LE6 453 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 RUFY4Q6ZNE9 571 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 FERMT3Q86UX7 667 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 RASGRP4Q8TDF6 673 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 LENG9Q96B70 501 aa17.65■□□□□ 0.42
CPSF3-203ENST00000475482 PRRC2BQ5JSZ5 2229 aaKnown RBP17.64■□□□□ 0.42
CPSF3-203ENST00000475482 RRN3P2A6NIE6 340 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 KIF28PB7ZC32 967 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 IPO5O00410 1097 aaKnown RBP17.64■□□□□ 0.41
CPSF3-203ENST00000475482 ARHGEF15O94989 841 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 GJB5O95377 273 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 CHRNA1P02708 482 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 MMP1P03956 469 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 INSRRP14616 1297 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 MARK3P27448 753 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 SLC26A2P50443 739 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 TAP1Q03518 808 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 MGAT3Q09327 533 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 PLCB4Q15147 1175 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 SKOR2Q2VWA4 1001 aaPredicted RBP17.64■□□□□ 0.41
CPSF3-203ENST00000475482 GAS2L1Q99501 681 aaPredicted RBP17.64■□□□□ 0.41
CPSF3-203ENST00000475482 SCAND2PQ9GZW5 306 aaPredicted RBP17.64■□□□□ 0.41
CPSF3-203ENST00000475482 AZI2Q9H6S1 392 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 TUBE1Q9UJT0 475 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 MYH15Q9Y2K3 1946 aa17.64■□□□□ 0.41
CPSF3-203ENST00000475482 LOXHD1Q8IVV2 1947 aa17.63■□□□□ 0.41
CPSF3-203ENST00000475482 NCLP19338 710 aaKnown RBP17.63■□□□□ 0.41
CPSF3-203ENST00000475482 POU3F3P20264 500 aaPredicted RBP17.63■□□□□ 0.41
CPSF3-203ENST00000475482 USP11P51784 963 aa17.63■□□□□ 0.41
CPSF3-203ENST00000475482 GALNT17Q6IS24 598 aa17.63■□□□□ 0.41
CPSF3-203ENST00000475482 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.63■□□□□ 0.41
CPSF3-203ENST00000475482 USP38Q8NB14 1042 aa17.63■□□□□ 0.41
CPSF3-203ENST00000475482 DAGLBQ8NCG7 672 aa17.63■□□□□ 0.41
CPSF3-203ENST00000475482 AIFM3Q96NN9 605 aa17.63■□□□□ 0.41
CPSF3-203ENST00000475482 FOXP1Q9H334 677 aaPredicted RBP17.63■□□□□ 0.41
CPSF3-203ENST00000475482 TBC1D22BQ9NU19 505 aa17.63■□□□□ 0.41
CPSF3-203ENST00000475482 PCDHA4Q9UN74 947 aa17.63■□□□□ 0.41
CPSF3-203ENST00000475482 EVPLQ92817 2033 aa17.63■□□□□ 0.41
CPSF3-203ENST00000475482 TLL1O43897 1013 aa17.62■□□□□ 0.41
CPSF3-203ENST00000475482 RPLP2P05387 115 aaKnown RBP17.62■□□□□ 0.41
CPSF3-203ENST00000475482 CTSHP09668 335 aa17.62■□□□□ 0.41
CPSF3-203ENST00000475482 ZNF746Q6NUN9 644 aaPredicted RBP17.62■□□□□ 0.41
CPSF3-203ENST00000475482 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.62■□□□□ 0.412e-7■■■■□ 23.8
CPSF3-203ENST00000475482 TMCO2Q7Z6W1 182 aaPredicted RBP17.62■□□□□ 0.41
CPSF3-203ENST00000475482 CCDC60Q8IWA6 550 aaPredicted RBP17.62■□□□□ 0.41
CPSF3-203ENST00000475482 ZNF577Q9BSK1 485 aa17.62■□□□□ 0.41
CPSF3-203ENST00000475482 PCDHA2Q9Y5H9 948 aa17.62■□□□□ 0.41
CPSF3-203ENST00000475482 TTC3P53804 2025 aa17.61■□□□□ 0.41
CPSF3-203ENST00000475482 LCHNA4D1U4 455 aa17.61■□□□□ 0.41
CPSF3-203ENST00000475482 U2AF2P26368 475 aaKnown RBP eCLIP17.61■□□□□ 0.41
CPSF3-203ENST00000475482 KRT2P35908 639 aa17.61■□□□□ 0.41
CPSF3-203ENST00000475482 NLRP5P59047 1200 aa17.61■□□□□ 0.41
CPSF3-203ENST00000475482 DNM1Q05193 864 aaKnown RBP17.61■□□□□ 0.41
CPSF3-203ENST00000475482 NBR1Q14596 966 aa17.61■□□□□ 0.41
CPSF3-203ENST00000475482 PRR16Q569H4 304 aa17.61■□□□□ 0.41
CPSF3-203ENST00000475482 DIS3L2Q8IYB7 885 aaKnown RBP17.61■□□□□ 0.41
CPSF3-203ENST00000475482 DNAJB3Q8WWF6 145 aa17.61■□□□□ 0.41
CPSF3-203ENST00000475482 SEPT8Q92599 483 aa17.61■□□□□ 0.41
CPSF3-203ENST00000475482 APBB2Q92870 758 aa17.61■□□□□ 0.41
CPSF3-203ENST00000475482 RAD9AQ99638 391 aa17.61■□□□□ 0.41
CPSF3-203ENST00000475482 PHF20Q9BVI0 1012 aa17.61■□□□□ 0.41
CPSF3-203ENST00000475482 MAFBQ9Y5Q3 323 aaPredicted RBP17.61■□□□□ 0.41
CPSF3-203ENST00000475482 VCANP13611 3396 aa17.61■□□□□ 0.41
CPSF3-203ENST00000475482 CYP3A7-CYP3A51PA0A087WV96 503 aa17.6■□□□□ 0.41
CPSF3-203ENST00000475482 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.6■□□□□ 0.41
CPSF3-203ENST00000475482 POTEB3A0JP26 581 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms