RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 RSPH10B2B2RC85 870 aa21.37■■□□□ 1.01
PTCD3-210ENST00000473829 ZBTB42B2RXF5 422 aa21.37■■□□□ 1.01
PTCD3-210ENST00000473829 KIF28PB7ZC32 967 aa21.37■■□□□ 1.01
PTCD3-210ENST00000473829 ZNF862O60290 1169 aa21.37■■□□□ 1.01
PTCD3-210ENST00000473829 RSPH10BP0C881 870 aa21.37■■□□□ 1.01
PTCD3-210ENST00000473829 NAP1L4Q99733 375 aaKnown RBP21.37■■□□□ 1.01
PTCD3-210ENST00000473829 FTOQ9C0B1 505 aaKnown RBP eCLIP21.37■■□□□ 1.01
PTCD3-210ENST00000473829 RRN3P2A6NIE6 340 aa21.36■■□□□ 1.01
PTCD3-210ENST00000473829 EML1O00423 815 aa21.36■■□□□ 1.01
PTCD3-210ENST00000473829 HBP1O60381 514 aa21.36■■□□□ 1.01
PTCD3-210ENST00000473829 CAND2O75155 1236 aa21.36■■□□□ 1.01
PTCD3-210ENST00000473829 SFNP31947 248 aa21.36■■□□□ 1.01
PTCD3-210ENST00000473829 JAK3P52333 1124 aa21.36■■□□□ 1.01
PTCD3-210ENST00000473829 SMAD3P84022 425 aaKnown RBP21.36■■□□□ 1.01
PTCD3-210ENST00000473829 SAFBQ15424 915 aaKnown RBP eCLIP21.36■■□□□ 1.01
PTCD3-210ENST00000473829 TRMT1LQ7Z2T5 733 aaKnown RBP21.36■■□□□ 1.01
PTCD3-210ENST00000473829 MIER3Q7Z3K6 550 aa21.36■■□□□ 1.01
PTCD3-210ENST00000473829 FAM20AQ96MK3 541 aa21.36■■□□□ 1.01
PTCD3-210ENST00000473829 TBX3O15119 743 aa21.35■■□□□ 1.01
PTCD3-210ENST00000473829 FAM26DQ5JW98 314 aa21.35■■□□□ 1.01
PTCD3-210ENST00000473829 TAF2Q6P1X5 1199 aa21.35■■□□□ 1.01
PTCD3-210ENST00000473829 Q7L0L9 218 aa21.35■■□□□ 1.01
PTCD3-210ENST00000473829 RPAINQ86UA6 219 aa21.35■■□□□ 1.01
PTCD3-210ENST00000473829 CKAP2LQ8IYA6 745 aa21.35■■□□□ 1.01
PTCD3-210ENST00000473829 DNAJB3Q8WWF6 145 aa21.35■■□□□ 1.01
PTCD3-210ENST00000473829 FOXP1Q9H334 677 aaPredicted RBP21.35■■□□□ 1.01
PTCD3-210ENST00000473829 EVPLQ92817 2033 aa21.34■■□□□ 1.01
PTCD3-210ENST00000473829 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.34■■□□□ 1.01
PTCD3-210ENST00000473829 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.34■■□□□ 1.01
PTCD3-210ENST00000473829 ZBBXA8MT70 800 aa21.34■■□□□ 1.01
PTCD3-210ENST00000473829 SLC34A2O95436 690 aa21.34■■□□□ 1.01
PTCD3-210ENST00000473829 PARNO95453 639 aaKnown RBP21.34■■□□□ 1.01
PTCD3-210ENST00000473829 CHRNA1P02708 482 aa21.34■■□□□ 1.01
PTCD3-210ENST00000473829 GJB2P29033 226 aa21.34■■□□□ 1.01
PTCD3-210ENST00000473829 PRKCEQ02156 737 aa21.34■■□□□ 1.01
PTCD3-210ENST00000473829 SPIRE1Q08AE8 756 aa21.34■■□□□ 1.01
PTCD3-210ENST00000473829 MGAT3Q09327 533 aa21.34■■□□□ 1.01
PTCD3-210ENST00000473829 PPP2R5CQ13362 524 aa21.34■■□□□ 1.01
PTCD3-210ENST00000473829 GPR153Q6NV75 609 aa21.34■■□□□ 1.01
PTCD3-210ENST00000473829 MTHFD1LQ6UB35 978 aa21.34■■□□□ 1.01
PTCD3-210ENST00000473829 PIAS4Q8N2W9 510 aaPredicted RBP21.34■■□□□ 1.01
PTCD3-210ENST00000473829 RDM1Q8NG50 284 aa21.34■■□□□ 1.01
PTCD3-210ENST00000473829 BBXQ8WY36 941 aaPredicted RBP21.34■■□□□ 1.01
PTCD3-210ENST00000473829 TNPO1Q92973 898 aaKnown RBP21.34■■□□□ 1.01
PTCD3-210ENST00000473829 FAM49AQ9H0Q0 323 aaPredicted RBP21.34■■□□□ 1.01
PTCD3-210ENST00000473829 MTIF3Q9H2K0 278 aaKnown RBP21.34■■□□□ 1.01
PTCD3-210ENST00000473829 COL1A2P08123 1366 aa21.34■■□□□ 1.01
PTCD3-210ENST00000473829 LOXHD1Q8IVV2 1947 aa21.33■■□□□ 1.01
PTCD3-210ENST00000473829 MICAL3Q7RTP6 2002 aa21.33■■□□□ 1.01
PTCD3-210ENST00000473829 ATP2B1P20020 1258 aa21.33■■□□□ 1.01
PTCD3-210ENST00000473829 KLRC1P26715 233 aa21.33■■□□□ 1.01
PTCD3-210ENST00000473829 PBX2P40425 430 aa21.33■■□□□ 1.01
PTCD3-210ENST00000473829 ZNF484Q5JVG2 852 aa21.33■■□□□ 1.01
PTCD3-210ENST00000473829 CNKSR3Q6P9H4 555 aa21.33■■□□□ 1.01
PTCD3-210ENST00000473829 NOSTRINQ8IVI9 506 aa21.33■■□□□ 1.01
PTCD3-210ENST00000473829 PCDHA2Q9Y5H9 948 aa21.33■■□□□ 1.01
PTCD3-210ENST00000473829 NEMFO60524 1076 aa21.32■■□□□ 1
PTCD3-210ENST00000473829 STBD1O95210 358 aa21.32■■□□□ 1
PTCD3-210ENST00000473829 C22orf31O95567 290 aa21.32■■□□□ 1
PTCD3-210ENST00000473829 OATP04181 439 aa21.32■■□□□ 1
PTCD3-210ENST00000473829 ACTN1P12814 892 aa21.32■■□□□ 1
PTCD3-210ENST00000473829 BANK1Q8NDB2 785 aa21.32■■□□□ 1
PTCD3-210ENST00000473829 TMEM60Q9H2L4 133 aa21.32■■□□□ 1
PTCD3-210ENST00000473829 SLC4A7Q9Y6M7 1214 aa21.32■■□□□ 1
PTCD3-210ENST00000473829 TMEM150BA6NC51 233 aa21.31■■□□□ 1
PTCD3-210ENST00000473829 U2AF2P26368 475 aaKnown RBP eCLIP21.31■■□□□ 1
PTCD3-210ENST00000473829 CUL4AQ13619 759 aa21.31■■□□□ 1
PTCD3-210ENST00000473829 CALCRLQ16602 461 aa21.31■■□□□ 1
PTCD3-210ENST00000473829 PLEKHG4Q58EX7 1191 aa21.31■■□□□ 1
PTCD3-210ENST00000473829 DBF4BQ8NFT6 615 aa21.31■■□□□ 1
PTCD3-210ENST00000473829 FAM167AQ96KS9 214 aa21.31■■□□□ 1
PTCD3-210ENST00000473829 MTMR9Q96QG7 549 aa21.31■■□□□ 1
PTCD3-210ENST00000473829 PBX4Q9BYU1 374 aa21.31■■□□□ 1
PTCD3-210ENST00000473829 CDY2AQ9Y6F7 541 aa21.31■■□□□ 1
PTCD3-210ENST00000473829 SMIM35A0A1B0GVV1 85 aa21.3■■□□□ 1
PTCD3-210ENST00000473829 MARCH6O60337 910 aa21.3■■□□□ 1
PTCD3-210ENST00000473829 BAIAP3O94812 1187 aa21.3■■□□□ 1
PTCD3-210ENST00000473829 DNAJB2P25686 324 aa21.3■■□□□ 1
PTCD3-210ENST00000473829 MCM7P33993 719 aa21.3■■□□□ 1
PTCD3-210ENST00000473829 WDR5P61964 334 aaKnown RBP21.3■■□□□ 1
PTCD3-210ENST00000473829 MRPS6P82932 125 aaKnown RBP21.3■■□□□ 1
PTCD3-210ENST00000473829 TMEM62Q0P6H9 643 aa21.3■■□□□ 1
PTCD3-210ENST00000473829 MKRN4PQ13434 485 aaPredicted RBP21.3■■□□□ 1
PTCD3-210ENST00000473829 GNL2Q13823 731 aaKnown RBP21.3■■□□□ 1
PTCD3-210ENST00000473829 NBR1Q14596 966 aa21.3■■□□□ 1
PTCD3-210ENST00000473829 NCAPH2Q6IBW4 605 aa21.3■■□□□ 1
PTCD3-210ENST00000473829 RSPH3Q86UC2 560 aa21.3■■□□□ 1
PTCD3-210ENST00000473829 SLFN12Q8IYM2 578 aa21.3■■□□□ 1
PTCD3-210ENST00000473829 DEFB123Q8N688 67 aa21.3■■□□□ 1
PTCD3-210ENST00000473829 WRAP73Q9P2S5 460 aaPredicted RBP21.3■■□□□ 1
PTCD3-210ENST00000473829 SMC3Q9UQE7 1217 aa21.3■■□□□ 1
PTCD3-210ENST00000473829 KIF3AQ9Y496 699 aa21.3■■□□□ 1
PTCD3-210ENST00000473829 CHD9Q3L8U1 2897 aa21.3■■□□□ 1
PTCD3-210ENST00000473829 BAG4O95429 457 aaKnown RBP21.29■■□□□ 1
PTCD3-210ENST00000473829 GHRP10912 638 aa21.29■■□□□ 1
PTCD3-210ENST00000473829 ATP2A2P16615 1042 aaKnown RBP21.29■■□□□ 1
PTCD3-210ENST00000473829 RABGGTBP53611 331 aa21.29■■□□□ 1
PTCD3-210ENST00000473829 DEFB103AP81534 67 aa21.29■■□□□ 1
PTCD3-210ENST00000473829 TMCO2Q7Z6W1 182 aaPredicted RBP21.29■■□□□ 1
PTCD3-210ENST00000473829 KIAA0319LQ8IZA0 1049 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms