RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 RNF19AQ9NV58 838 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 USP34Q70CQ2 3546 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 IGSF9BQ9UPX0 1349 aa11.07□□□□□ -0.64
MCF2L-223ENST00000473345 ZBTB42B2RXF5 422 aa11.06□□□□□ -0.64
MCF2L-223ENST00000473345 NCK2O43639 380 aa11.06□□□□□ -0.64
MCF2L-223ENST00000473345 CCNE2O96020 404 aa11.06□□□□□ -0.64
MCF2L-223ENST00000473345 IBSPP21815 317 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-223ENST00000473345 APOBRQ0VD83 1088 aa11.06□□□□□ -0.64
MCF2L-223ENST00000473345 TTC22Q5TAA0 569 aa11.06□□□□□ -0.64
MCF2L-223ENST00000473345 NPAS4Q8IUM7 802 aa11.06□□□□□ -0.64
MCF2L-223ENST00000473345 PBXIP1Q96AQ6 731 aa11.06□□□□□ -0.64
MCF2L-223ENST00000473345 MFSD14AQ96MC6 490 aa11.06□□□□□ -0.64
MCF2L-223ENST00000473345 UPF3BQ9BZI7 483 aaKnown RBP11.06□□□□□ -0.64
MCF2L-223ENST00000473345 S1PR5Q9H228 398 aa11.06□□□□□ -0.64
MCF2L-223ENST00000473345 ERVK-5Q9HDB9 667 aa11.06□□□□□ -0.64
MCF2L-223ENST00000473345 ERAP1Q9NZ08 941 aa11.06□□□□□ -0.64
MCF2L-223ENST00000473345 FAM50BQ9Y247 325 aa11.06□□□□□ -0.64
MCF2L-223ENST00000473345 NOC2LQ9Y3T9 749 aaKnown RBP11.06□□□□□ -0.64
MCF2L-223ENST00000473345 TRPV2Q9Y5S1 764 aa11.06□□□□□ -0.64
MCF2L-223ENST00000473345 HIP1O00291 1037 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 FSCN2O14926 492 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 SCG2P13521 617 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 ATP4AP20648 1035 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 SYCE2Q6PIF2 218 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 LRRC55Q6ZSA7 311 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 NLRX1Q86UT6 975 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 GLG1Q92896 1179 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 RPGRIP1Q96KN7 1286 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 PPP1R16BQ96T49 567 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 POP1Q99575 1024 aaKnown RBP11.05□□□□□ -0.64
MCF2L-223ENST00000473345 APOL5Q9BWW9 433 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 RWDD1Q9H446 243 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-223ENST00000473345 CWH43Q9H720 699 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 JADE2Q9NQC1 790 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 PCDHA6Q9UN73 950 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 RWDD3Q9Y3V2 267 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 PCDHA8Q9Y5H6 950 aa11.05□□□□□ -0.64
MCF2L-223ENST00000473345 SH2B2O14492 632 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-223ENST00000473345 SGSM2O43147 1006 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 FGFR1P11362 822 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 SP100P23497 879 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-223ENST00000473345 PBX3P40426 434 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 ACTR2P61160 394 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 MTMR1Q13613 665 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 DUSP6Q16828 381 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 XRRA1Q6P2D8 792 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 MTHFD1LQ6UB35 978 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 CATIPQ7Z7H3 387 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 KIAA0319LQ8IZA0 1049 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 CCDC82Q8N4S0 544 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 FBXL6Q8N531 539 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 NCOA7Q8NI08 942 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 RRP36Q96EU6 259 aaKnown RBP11.04□□□□□ -0.64
MCF2L-223ENST00000473345 LRRC2Q9BYS8 371 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 CELF4Q9BZC1 486 aaKnown RBP11.04□□□□□ -0.64
MCF2L-223ENST00000473345 SMARCAD1Q9H4L7 1026 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 KCNH7Q9NS40 1196 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 PCDHA2Q9Y5H9 948 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 U3KPZ7 1027 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-223ENST00000473345 PLXNA3P51805 1871 aa11.04□□□□□ -0.64
MCF2L-223ENST00000473345 LOXHD1Q8IVV2 1947 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 IGKV6D-21A0A0A0MT36 114 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 HIDE1A8MVS5 230 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 C9IYK1 514 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 ATG7O95352 703 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 SARSP49591 514 aaKnown RBP11.03□□□□□ -0.64
MCF2L-223ENST00000473345 FUT2Q10981 343 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 DSC3Q14574 896 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 KANK3Q6NY19 840 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 CCDC60Q8IWA6 550 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-223ENST00000473345 COLGALT1Q8NBJ5 622 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 MAP4K1Q92918 833 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 PHF7Q9BWX1 381 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-223ENST00000473345 TLE6Q9H808 572 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 PSTPIP2Q9H939 334 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 JPH1Q9HDC5 661 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-223ENST00000473345 TYW1Q9NV66 732 aaKnown RBP11.03□□□□□ -0.64
MCF2L-223ENST00000473345 TMEM260Q9NX78 707 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 SLC9A2Q9UBY0 812 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 RBM8AQ9Y5S9 174 aaKnown RBP11.03□□□□□ -0.64
MCF2L-223ENST00000473345 SQORQ9Y6N5 450 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 FNDC1Q4ZHG4 1894 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-223ENST00000473345 KDM3AQ9Y4C1 1321 aa11.03□□□□□ -0.64
MCF2L-223ENST00000473345 SMIM35A0A1B0GVV1 85 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 TBKBP1A7MCY6 615 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 DHX15O43143 795 aaKnown RBP11.02□□□□□ -0.65
MCF2L-223ENST00000473345 PRC1O43663 620 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 FGF18O76093 207 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 DDAH1O94760 285 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 AVPR2P30518 371 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 TRDNQ13061 729 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 PAK2Q13177 524 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 NAALADL2Q58DX5 795 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 WWC2Q6AWC2 1192 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 RALYLQ86SE5 291 aaKnown RBP11.02□□□□□ -0.65
MCF2L-223ENST00000473345 RSPH3Q86UC2 560 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 FAM228AQ86W67 206 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 CUL5Q93034 780 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 MAP3K14Q99558 947 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 ADAM2Q99965 735 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms