RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 DDX11L8A8MPP1 907 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 OATP04181 439 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 SPATA31C1P0DKV0 1188 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 GNAT1P11488 350 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 MARCKSP29966 332 aaPredicted RBP13.82□□□□□ -0.2
PRKCB-205ENST00000472066 ADAM17P78536 824 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 PRKCEQ02156 737 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 CYP4A11Q02928 519 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 PPFIA1Q13136 1202 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 GRIK4Q16099 956 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 XKR3Q5GH77 459 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 ZNF484Q5JVG2 852 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 MARCH8Q5T0T0 291 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 CATSPER3Q86XQ3 398 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 TPH2Q8IWU9 490 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 C4orf19Q8IY42 314 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 LINC00301Q8NCQ3 95 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 ERMNQ8TAM6 284 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 LMBR1Q8WVP7 490 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 FAM167AQ96KS9 214 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 CTAGE1Q96RT6 745 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 LXNQ9BS40 222 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 POLR3CQ9BUI4 534 aaPredicted RBP13.82□□□□□ -0.2
PRKCB-205ENST00000472066 ZSWIM4Q9H7M6 989 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 TUFT1Q9NNX1 390 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 CFAP45Q9UL16 551 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 ATP6V1DQ9Y5K8 247 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 STK24Q9Y6E0 443 aa13.82□□□□□ -0.2
PRKCB-205ENST00000472066 DOCK5Q9H7D0 1870 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 PP2D1A8MPX8 630 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 TREHO43280 583 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 MED24O75448 989 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 YEATS4O95619 227 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 CLTBP09497 229 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 RPA1P27694 616 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 CDC25AP30304 524 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 LONP1P36776 959 aaKnown RBP13.81□□□□□ -0.2
PRKCB-205ENST00000472066 IGBP1P78318 339 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 GRIN1Q05586 938 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 STK38Q15208 465 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 SH3RF1Q7Z6J0 888 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 IPO9Q96P70 1041 aaKnown RBP13.81□□□□□ -0.2
PRKCB-205ENST00000472066 NIFKQ9BYG3 293 aaKnown RBP13.81□□□□□ -0.2
PRKCB-205ENST00000472066 PDLIM7Q9NR12 457 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 TMEM39AQ9NV64 488 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 FBXO2Q9UK22 296 aaPredicted RBP13.81□□□□□ -0.2
PRKCB-205ENST00000472066 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
PRKCB-205ENST00000472066 NOD1Q9Y239 953 aa13.81□□□□□ -0.2
PRKCB-205ENST00000472066 SRPRBQ9Y5M8 271 aaKnown RBP13.81□□□□□ -0.2
PRKCB-205ENST00000472066 TRIM43BA6NCK2 446 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 ZBTB42B2RXF5 422 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 ZBTB39O15060 712 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 SPTLC2O15270 562 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 PPP6R2O75170 966 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 LYPLA2O95372 231 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 CYP2C9P11712 490 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 MUTP22033 750 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 CCT6AP40227 531 aaKnown RBP13.8□□□□□ -0.2
PRKCB-205ENST00000472066 PTK7Q13308 1070 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 TARBP2Q15633 366 aaKnown RBP13.8□□□□□ -0.2
PRKCB-205ENST00000472066 KRT79Q5XKE5 535 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 HAUS3Q68CZ6 603 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 ANO5Q75V66 913 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 SERINC5Q86VE9 423 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 SNX29Q8TEQ0 813 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 TRAPPC12Q8WVT3 735 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 TRIM43Q96BQ3 446 aaPredicted RBP13.8□□□□□ -0.2
PRKCB-205ENST00000472066 AK8Q96MA6 479 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 MMTAG2Q9BU76 263 aaKnown RBP13.8□□□□□ -0.2
PRKCB-205ENST00000472066 SEPT9Q9UHD8 586 aaPredicted RBP13.8□□□□□ -0.2
PRKCB-205ENST00000472066 RCOR1Q9UKL0 485 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 TBX21Q9UL17 535 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 NR2E3Q9Y5X4 410 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 COL1A2P08123 1366 aa13.8□□□□□ -0.2
PRKCB-205ENST00000472066 A0A087WWV3 80 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 MBLAC1A4D2B0 266 aaPredicted RBP13.79□□□□□ -0.2
PRKCB-205ENST00000472066 TMEM150BA6NC51 233 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 KIAA0355O15063 1070 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 XRCC6P12956 609 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRKCB-205ENST00000472066 KLRC1P26715 233 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 YWHABP31946 246 aaKnown RBP13.79□□□□□ -0.2
PRKCB-205ENST00000472066 ECM1Q16610 540 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 MTHFD1LQ6UB35 978 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 OTUD6AQ7L8S5 288 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 KRI1Q8N9T8 703 aaKnown RBP13.79□□□□□ -0.2
PRKCB-205ENST00000472066 DHX38Q92620 1227 aaKnown RBP13.79□□□□□ -0.2
PRKCB-205ENST00000472066 ZBTB10Q96DT7 871 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 CHAMP1Q96JM3 812 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 CLIC6Q96NY7 704 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 NACC1Q96RE7 527 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 CSRNP2Q9H175 543 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 PRDM5Q9NQX1 630 aaPredicted RBP13.79□□□□□ -0.2
PRKCB-205ENST00000472066 CHMP5Q9NZZ3 219 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 TUBE1Q9UJT0 475 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 SCN10AQ9Y5Y9 1956 aa13.79□□□□□ -0.2
PRKCB-205ENST00000472066 SYN1P17600 705 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 NPEPPSP55786 919 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 KRT85P78386 507 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 MTERF2Q49AM1 385 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 PLA2G4FQ68DD2 849 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms