RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 PPFIA3O75145 1194 aa22.72■■□□□ 1.23
CCDC78-208ENST00000471861 IGHDP01880 384 aa22.72■■□□□ 1.23
CCDC78-208ENST00000471861 STAG3L1P0CL83 205 aa22.72■■□□□ 1.23
CCDC78-208ENST00000471861 PTH1RQ03431 593 aa22.72■■□□□ 1.23
CCDC78-208ENST00000471861 PAK2Q13177 524 aa22.72■■□□□ 1.23
CCDC78-208ENST00000471861 IER5Q5VY09 327 aa22.72■■□□□ 1.23
CCDC78-208ENST00000471861 CDHR1Q96JP9 859 aa22.72■■□□□ 1.23
CCDC78-208ENST00000471861 MYL10Q9BUA6 226 aa22.72■■□□□ 1.23
CCDC78-208ENST00000471861 TLE6Q9H808 572 aa22.72■■□□□ 1.23
CCDC78-208ENST00000471861 FNDC1Q4ZHG4 1894 aaPredicted RBP22.71■■□□□ 1.23
CCDC78-208ENST00000471861 RRN3P2A6NIE6 340 aa22.71■■□□□ 1.23
CCDC78-208ENST00000471861 GFRA3O60609 400 aa22.71■■□□□ 1.23
CCDC78-208ENST00000471861 ATF7P17544 494 aaPredicted RBP22.71■■□□□ 1.23
CCDC78-208ENST00000471861 MTMR1Q13613 665 aa22.71■■□□□ 1.23
CCDC78-208ENST00000471861 DUSP6Q16828 381 aa22.71■■□□□ 1.23
CCDC78-208ENST00000471861 TMEM266Q2M3C6 531 aa22.71■■□□□ 1.23
CCDC78-208ENST00000471861 IGDCC4Q8TDY8 1250 aa22.71■■□□□ 1.23
CCDC78-208ENST00000471861 PLXNA3P51805 1871 aa22.71■■□□□ 1.23
CCDC78-208ENST00000471861 ERICH2A1L162 156 aa22.7■■□□□ 1.22
CCDC78-208ENST00000471861 E7EWF7 191 aa22.7■■□□□ 1.22
CCDC78-208ENST00000471861 PDGFBP01127 241 aaPredicted RBP22.7■■□□□ 1.22
CCDC78-208ENST00000471861 RPLP2P05387 115 aaKnown RBP22.7■■□□□ 1.22
CCDC78-208ENST00000471861 ERVFC1P60507 584 aa22.7■■□□□ 1.22
CCDC78-208ENST00000471861 KCNC3Q14003 757 aa22.7■■□□□ 1.22
CCDC78-208ENST00000471861 PLCB4Q15147 1175 aa22.7■■□□□ 1.22
CCDC78-208ENST00000471861 UBE2SQ16763 222 aa22.7■■□□□ 1.22
CCDC78-208ENST00000471861 CATIPQ7Z7H3 387 aa22.7■■□□□ 1.22
CCDC78-208ENST00000471861 RRP36Q96EU6 259 aaKnown RBP22.7■■□□□ 1.22
CCDC78-208ENST00000471861 CELF4Q9BZC1 486 aaKnown RBP22.7■■□□□ 1.22
CCDC78-208ENST00000471861 TLR9Q9NR96 1032 aa22.7■■□□□ 1.22
CCDC78-208ENST00000471861 PCDHA2Q9Y5H9 948 aa22.7■■□□□ 1.22
CCDC78-208ENST00000471861 KDM3AQ9Y4C1 1321 aa22.7■■□□□ 1.22
CCDC78-208ENST00000471861 ZFHX2Q9C0A1 2572 aaPredicted RBP22.69■■□□□ 1.22
CCDC78-208ENST00000471861 PLEKHA8P1O95397 391 aa22.69■■□□□ 1.22
CCDC78-208ENST00000471861 IBSPP21815 317 aaPredicted RBP22.69■■□□□ 1.22
CCDC78-208ENST00000471861 AVPR2P30518 371 aa22.69■■□□□ 1.22
CCDC78-208ENST00000471861 SARSP49591 514 aaKnown RBP22.69■■□□□ 1.22
CCDC78-208ENST00000471861 UBE3AQ05086 875 aa22.69■■□□□ 1.22
CCDC78-208ENST00000471861 PTPN21Q16825 1174 aa22.69■■□□□ 1.22
CCDC78-208ENST00000471861 S1PR5Q9H228 398 aa22.69■■□□□ 1.22
CCDC78-208ENST00000471861 U3KPZ7 1027 aaPredicted RBP22.69■■□□□ 1.22
CCDC78-208ENST00000471861 M0QZ92 97 aa22.68■■□□□ 1.22
CCDC78-208ENST00000471861 FSCN2O14926 492 aa22.68■■□□□ 1.22
CCDC78-208ENST00000471861 GSPT1P15170 499 aaKnown RBP22.68■■□□□ 1.22
CCDC78-208ENST00000471861 RALYLQ86SE5 291 aaKnown RBP22.68■■□□□ 1.22
CCDC78-208ENST00000471861 MB21D2Q8IYB1 491 aaPredicted RBP22.68■■□□□ 1.22
CCDC78-208ENST00000471861 ZNF654Q8IZM8 581 aa22.68■■□□□ 1.22
CCDC78-208ENST00000471861 MAP3K14Q99558 947 aa22.68■■□□□ 1.22
CCDC78-208ENST00000471861 LY9Q9HBG7 655 aa22.68■■□□□ 1.22
CCDC78-208ENST00000471861 JPH1Q9HDC5 661 aaPredicted RBP22.68■■□□□ 1.22
CCDC78-208ENST00000471861 JADE2Q9NQC1 790 aa22.68■■□□□ 1.22
CCDC78-208ENST00000471861 LRFN2Q9ULH4 789 aa22.68■■□□□ 1.22
CCDC78-208ENST00000471861 TRPC6Q9Y210 931 aa22.68■■□□□ 1.22
CCDC78-208ENST00000471861 FGF18O76093 207 aa22.67■■□□□ 1.22
CCDC78-208ENST00000471861 SART3Q15020 963 aaKnown RBP22.67■■□□□ 1.22
CCDC78-208ENST00000471861 FAM102BQ5T8I3 360 aa22.67■■□□□ 1.22
CCDC78-208ENST00000471861 CMTR1Q8N1G2 835 aaKnown RBP22.67■■□□□ 1.22
CCDC78-208ENST00000471861 SRBD1Q8N5C6 995 aaKnown RBP22.67■■□□□ 1.22
CCDC78-208ENST00000471861 NCOA7Q8NI08 942 aa22.67■■□□□ 1.22
CCDC78-208ENST00000471861 MICAL1Q8TDZ2 1067 aa22.67■■□□□ 1.22
CCDC78-208ENST00000471861 TMEM40Q8WWA1 233 aa22.67■■□□□ 1.22
CCDC78-208ENST00000471861 NEK1Q96PY6 1258 aa22.67■■□□□ 1.22
CCDC78-208ENST00000471861 RWDD1Q9H446 243 aaPredicted RBP22.67■■□□□ 1.22
CCDC78-208ENST00000471861 PSTPIP2Q9H939 334 aa22.67■■□□□ 1.22
CCDC78-208ENST00000471861 CDHR5Q9HBB8 845 aa22.67■■□□□ 1.22
CCDC78-208ENST00000471861 ERVK-5Q9HDB9 667 aa22.67■■□□□ 1.22
CCDC78-208ENST00000471861 SMIM35A0A1B0GVV1 85 aa22.66■■□□□ 1.22
CCDC78-208ENST00000471861 TBKBP1A7MCY6 615 aa22.66■■□□□ 1.22
CCDC78-208ENST00000471861 DDAH1O94760 285 aa22.66■■□□□ 1.22
CCDC78-208ENST00000471861 KRT76Q01546 638 aa22.66■■□□□ 1.22
CCDC78-208ENST00000471861 SYCE2Q6PIF2 218 aa22.66■■□□□ 1.22
CCDC78-208ENST00000471861 COLGALT1Q8NBJ5 622 aa22.66■■□□□ 1.22
CCDC78-208ENST00000471861 CTCFLQ8NI51 663 aaPredicted RBP22.66■■□□□ 1.22
CCDC78-208ENST00000471861 CDCA3Q99618 268 aaPredicted RBP22.66■■□□□ 1.22
CCDC78-208ENST00000471861 SLC9A2Q9UBY0 812 aa22.66■■□□□ 1.22
CCDC78-208ENST00000471861 SEC63Q9UGP8 760 aaKnown RBP22.66■■□□□ 1.22
CCDC78-208ENST00000471861 CDH22Q9UJ99 828 aa22.66■■□□□ 1.22
CCDC78-208ENST00000471861 NOC2LQ9Y3T9 749 aaKnown RBP22.66■■□□□ 1.22
CCDC78-208ENST00000471861 PCDHB12Q9Y5F1 795 aa22.66■■□□□ 1.22
CCDC78-208ENST00000471861 SP100P23497 879 aaPredicted RBP22.65■■□□□ 1.22
CCDC78-208ENST00000471861 SMARCA1P28370 1054 aa22.65■■□□□ 1.22
CCDC78-208ENST00000471861 ACTR2P61160 394 aa22.65■■□□□ 1.22
CCDC78-208ENST00000471861 APOBRQ0VD83 1088 aa22.65■■□□□ 1.22
CCDC78-208ENST00000471861 NFX1Q12986 1120 aaKnown RBP22.65■■□□□ 1.22
CCDC78-208ENST00000471861 COL9A3Q14050 684 aaPredicted RBP22.65■■□□□ 1.22
CCDC78-208ENST00000471861 MTHFD1LQ6UB35 978 aa22.65■■□□□ 1.22
CCDC78-208ENST00000471861 TMEM184AQ6ZMB5 413 aa22.65■■□□□ 1.22
CCDC78-208ENST00000471861 CYP2W1Q8TAV3 490 aa22.65■■□□□ 1.22
CCDC78-208ENST00000471861 ATOH1Q92858 354 aaPredicted RBP22.65■■□□□ 1.22
CCDC78-208ENST00000471861 AZI2Q9H6S1 392 aa22.65■■□□□ 1.22
CCDC78-208ENST00000471861 CWH43Q9H720 699 aa22.65■■□□□ 1.22
CCDC78-208ENST00000471861 KCNH7Q9NS40 1196 aa22.65■■□□□ 1.22
CCDC78-208ENST00000471861 PCDHA6Q9UN73 950 aa22.65■■□□□ 1.22
CCDC78-208ENST00000471861 PCDHB7Q9Y5E2 793 aa22.65■■□□□ 1.22
CCDC78-208ENST00000471861 PCDHA8Q9Y5H6 950 aa22.65■■□□□ 1.22
CCDC78-208ENST00000471861 hCG_1642624A0A1W2PR95 340 aa22.64■■□□□ 1.21
CCDC78-208ENST00000471861 C9IYK1 514 aa22.64■■□□□ 1.21
CCDC78-208ENST00000471861 H0Y858 1186 aa22.64■■□□□ 1.21
CCDC78-208ENST00000471861 SPOUT1Q5T280 376 aaKnown RBP22.64■■□□□ 1.21
CCDC78-208ENST00000471861 PLPP4Q5VZY2 271 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms