RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 PFKMP08237 780 aa17.1■□□□□ 0.33
ABCF3-208ENST00000471226 TRAPPC10P48553 1259 aa17.1■□□□□ 0.33
ABCF3-208ENST00000471226 FXR1P51114 621 aaKnown RBP eCLIP17.1■□□□□ 0.33
ABCF3-208ENST00000471226 ORC2Q13416 577 aaPredicted RBP17.1■□□□□ 0.33
ABCF3-208ENST00000471226 GNL2Q13823 731 aaKnown RBP17.1■□□□□ 0.33
ABCF3-208ENST00000471226 RASIP1Q5U651 963 aa17.1■□□□□ 0.33
ABCF3-208ENST00000471226 TAF2Q6P1X5 1199 aa17.1■□□□□ 0.33
ABCF3-208ENST00000471226 BBXQ8WY36 941 aaPredicted RBP17.1■□□□□ 0.33
ABCF3-208ENST00000471226 COL1A2P08123 1366 aa17.1■□□□□ 0.33
ABCF3-208ENST00000471226 ZBTB42B2RXF5 422 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 K7ELQ4 463 aaPredicted RBP17.09■□□□□ 0.33
ABCF3-208ENST00000471226 EML1O00423 815 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 ZNF862O60290 1169 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 NEMFO60524 1076 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 THPOP40225 353 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 IGBP1P78318 339 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 SPIRE1Q08AE8 756 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 MBTPS1Q14703 1052 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 CALCRLQ16602 461 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 UGCGQ16739 394 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 ZNF484Q5JVG2 852 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 LARP1BQ659C4 914 aaKnown RBP17.09■□□□□ 0.33
ABCF3-208ENST00000471226 RUFY4Q6ZNE9 571 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 TRAPPC12Q8WVT3 735 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 HERVK_113Q902F9 699 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 INTS4Q96HW7 963 aaKnown RBP17.09■□□□□ 0.33
ABCF3-208ENST00000471226 MTMR9Q96QG7 549 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 PCDHA2Q9Y5H9 948 aa17.09■□□□□ 0.33
ABCF3-208ENST00000471226 GBF1Q92538 1859 aa17.08■□□□□ 0.33
ABCF3-208ENST00000471226 RSPH10B2B2RC85 870 aa17.08■□□□□ 0.32
ABCF3-208ENST00000471226 SOX1O00570 391 aaPredicted RBP17.08■□□□□ 0.32
ABCF3-208ENST00000471226 MARCH6O60337 910 aa17.08■□□□□ 0.32
ABCF3-208ENST00000471226 NBNO60934 754 aa17.08■□□□□ 0.32
ABCF3-208ENST00000471226 CXCL10P02778 98 aa17.08■□□□□ 0.32
ABCF3-208ENST00000471226 RSPH10BP0C881 870 aa17.08■□□□□ 0.32
ABCF3-208ENST00000471226 ATP2B1P20020 1258 aa17.08■□□□□ 0.32
ABCF3-208ENST00000471226 TOB1P50616 345 aaPredicted RBP17.08■□□□□ 0.32
ABCF3-208ENST00000471226 FAM26DQ5JW98 314 aa17.08■□□□□ 0.32
ABCF3-208ENST00000471226 MTHFD1LQ6UB35 978 aa17.08■□□□□ 0.32
ABCF3-208ENST00000471226 DEFB128Q7Z7B8 93 aa17.08■□□□□ 0.32
ABCF3-208ENST00000471226 CKAP2LQ8IYA6 745 aa17.08■□□□□ 0.32
ABCF3-208ENST00000471226 FAM167AQ96KS9 214 aa17.08■□□□□ 0.32
ABCF3-208ENST00000471226 RNPC3Q96LT9 517 aaKnown RBP17.08■□□□□ 0.32
ABCF3-208ENST00000471226 TMEM60Q9H2L4 133 aa17.08■□□□□ 0.32
ABCF3-208ENST00000471226 PCDHA12Q9UN75 941 aa17.08■□□□□ 0.32
ABCF3-208ENST00000471226 PTPRSQ13332 1948 aa17.08■□□□□ 0.32
ABCF3-208ENST00000471226 SMIM35A0A1B0GVV1 85 aa17.07■□□□□ 0.32
ABCF3-208ENST00000471226 H3BQV1 296 aa17.07■□□□□ 0.32
ABCF3-208ENST00000471226 STBD1O95210 358 aa17.07■□□□□ 0.32
ABCF3-208ENST00000471226 OATP04181 439 aa17.07■□□□□ 0.32
ABCF3-208ENST00000471226 MCM7P33993 719 aa17.07■□□□□ 0.32
ABCF3-208ENST00000471226 PRKCEQ02156 737 aa17.07■□□□□ 0.32
ABCF3-208ENST00000471226 EPHA7Q15375 998 aa17.07■□□□□ 0.32
ABCF3-208ENST00000471226 ZNF174Q15697 407 aa17.07■□□□□ 0.32
ABCF3-208ENST00000471226 TTC38Q5R3I4 469 aa17.07■□□□□ 0.32
ABCF3-208ENST00000471226 ZBTB10Q96DT7 871 aa17.07■□□□□ 0.32
ABCF3-208ENST00000471226 NRBP2Q9NSY0 501 aa17.07■□□□□ 0.32
ABCF3-208ENST00000471226 NOL7Q9UMY1 257 aaKnown RBP17.07■□□□□ 0.32
ABCF3-208ENST00000471226 MICAL3Q7RTP6 2002 aa17.07■□□□□ 0.32
ABCF3-208ENST00000471226 LAMA2P24043 3122 aaKnown RBP17.06■□□□□ 0.32
ABCF3-208ENST00000471226 ARID2Q68CP9 1835 aa17.06■□□□□ 0.32
ABCF3-208ENST00000471226 RPLP2P05387 115 aaKnown RBP17.06■□□□□ 0.32
ABCF3-208ENST00000471226 KLRC1P26715 233 aa17.06■□□□□ 0.32
ABCF3-208ENST00000471226 TXKP42681 527 aa17.06■□□□□ 0.32
ABCF3-208ENST00000471226 PSMC5P62195 406 aa17.06■□□□□ 0.32
ABCF3-208ENST00000471226 OTOP2Q7RTS6 562 aa17.06■□□□□ 0.32
ABCF3-208ENST00000471226 RSPH3Q86UC2 560 aa17.06■□□□□ 0.32
ABCF3-208ENST00000471226 BANK1Q8NDB2 785 aa17.06■□□□□ 0.32
ABCF3-208ENST00000471226 DNAJB3Q8WWF6 145 aa17.06■□□□□ 0.32
ABCF3-208ENST00000471226 TTC12Q9H892 705 aaPredicted RBP17.06■□□□□ 0.32
ABCF3-208ENST00000471226 CEP131Q9UPN4 1083 aa17.06■□□□□ 0.32
ABCF3-208ENST00000471226 C22orf31O95567 290 aa17.05■□□□□ 0.32
ABCF3-208ENST00000471226 CHRNA1P02708 482 aa17.05■□□□□ 0.32
ABCF3-208ENST00000471226 P4HBP07237 508 aaKnown RBP17.05■□□□□ 0.32
ABCF3-208ENST00000471226 CTSHP09668 335 aa17.05■□□□□ 0.32
ABCF3-208ENST00000471226 ACTN1P12814 892 aa17.05■□□□□ 0.32
ABCF3-208ENST00000471226 QARSP47897 775 aaKnown RBP17.05■□□□□ 0.32
ABCF3-208ENST00000471226 MGAT3Q09327 533 aa17.05■□□□□ 0.32
ABCF3-208ENST00000471226 TARBP2Q15633 366 aaKnown RBP17.05■□□□□ 0.32
ABCF3-208ENST00000471226 XKR3Q5GH77 459 aa17.05■□□□□ 0.32
ABCF3-208ENST00000471226 MCTP1Q6DN14 999 aa17.05■□□□□ 0.32
ABCF3-208ENST00000471226 TRMT1LQ7Z2T5 733 aaKnown RBP17.05■□□□□ 0.32
ABCF3-208ENST00000471226 C4orf32Q8N8J7 132 aa17.05■□□□□ 0.32
ABCF3-208ENST00000471226 LRCH3Q96II8 777 aa17.05■□□□□ 0.32
ABCF3-208ENST00000471226 NIFKQ9BYG3 293 aaKnown RBP17.05■□□□□ 0.32
ABCF3-208ENST00000471226 FTOQ9C0B1 505 aaKnown RBP eCLIP17.05■□□□□ 0.32
ABCF3-208ENST00000471226 CXXC1Q9P0U4 656 aaPredicted RBP17.05■□□□□ 0.32
ABCF3-208ENST00000471226 DKC1O60832 514 aaKnown RBP eCLIP17.04■□□□□ 0.32
ABCF3-208ENST00000471226 OR52Z1P0C646 297 aa17.04■□□□□ 0.32
ABCF3-208ENST00000471226 PDCP20941 246 aa17.04■□□□□ 0.32
ABCF3-208ENST00000471226 NBR1Q14596 966 aa17.04■□□□□ 0.32
ABCF3-208ENST00000471226 NCAPH2Q6IBW4 605 aa17.04■□□□□ 0.32
ABCF3-208ENST00000471226 CNKSR3Q6P9H4 555 aa17.04■□□□□ 0.32
ABCF3-208ENST00000471226 NME8Q8N427 588 aa17.04■□□□□ 0.32
ABCF3-208ENST00000471226 CEP89Q96ST8 783 aa17.04■□□□□ 0.32
ABCF3-208ENST00000471226 OSBPL7Q9BZF2 842 aa17.04■□□□□ 0.32
ABCF3-208ENST00000471226 MTIF3Q9H2K0 278 aaKnown RBP17.04■□□□□ 0.32
ABCF3-208ENST00000471226 WRAP73Q9P2S5 460 aaPredicted RBP17.04■□□□□ 0.32
ABCF3-208ENST00000471226 PCDHB6Q9Y5E3 794 aa17.04■□□□□ 0.32
ABCF3-208ENST00000471226 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms