RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TMX3Q96JJ7 454 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 CDX2Q99626 313 aaPredicted RBP16.37■□□□□ 0.21
COL27A1-203ENST00000468565 TCEAL9Q9UHQ7 104 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 TUBE1Q9UJT0 475 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 RPLP2P05387 115 aaKnown RBP16.36■□□□□ 0.21
COL27A1-203ENST00000468565 INSRRP14616 1297 aa16.36■□□□□ 0.21
COL27A1-203ENST00000468565 KCNJ6P48051 423 aa16.36■□□□□ 0.21
COL27A1-203ENST00000468565 Q4G0T1 1027 aa16.36■□□□□ 0.21
COL27A1-203ENST00000468565 MOXD1Q6UVY6 613 aa16.36■□□□□ 0.21
COL27A1-203ENST00000468565 KRT25Q7Z3Z0 450 aa16.36■□□□□ 0.21
COL27A1-203ENST00000468565 GZF1Q9H116 711 aaPredicted RBP16.36■□□□□ 0.21
COL27A1-203ENST00000468565 ORC3Q9UBD5 711 aaPredicted RBP16.36■□□□□ 0.21
COL27A1-203ENST00000468565 TRPC6Q9Y210 931 aa16.36■□□□□ 0.21
COL27A1-203ENST00000468565 CYP3A7-CYP3A51PA0A087WV96 503 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 BAG4O95429 457 aaKnown RBP16.35■□□□□ 0.21
COL27A1-203ENST00000468565 CYP3A7P24462 503 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 WDR5P61964 334 aaKnown RBP16.35■□□□□ 0.21
COL27A1-203ENST00000468565 NONOQ15233 471 aaKnown RBP eCLIP16.35■□□□□ 0.21
COL27A1-203ENST00000468565 MARCH8Q5T0T0 291 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 NECAB1Q8N987 351 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 ZNF302Q9NR11 478 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 KCNJ14Q9UNX9 436 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 YBX2Q9Y2T7 364 aaKnown RBP16.35■□□□□ 0.21
COL27A1-203ENST00000468565 BACH1O14867 736 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 MSH4O15457 936 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 CUL4AQ13619 759 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 IKBKEQ14164 716 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 PLEKHG4Q58EX7 1191 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 RUFY4Q6ZNE9 571 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 RSPH3Q86UC2 560 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 CCDC60Q8IWA6 550 aaPredicted RBP16.35■□□□□ 0.21
COL27A1-203ENST00000468565 SLC5A5Q92911 643 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 MBOAT7Q96N66 472 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 RIT2Q99578 217 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 NKX2-4Q9H2Z4 354 aa16.35■□□□□ 0.21
COL27A1-203ENST00000468565 POTEB3A0JP26 581 aa16.34■□□□□ 0.21
COL27A1-203ENST00000468565 CTSHP09668 335 aa16.34■□□□□ 0.21
COL27A1-203ENST00000468565 FDPSP14324 419 aaKnown RBP16.34■□□□□ 0.21
COL27A1-203ENST00000468565 RABGGTBP53611 331 aa16.34■□□□□ 0.21
COL27A1-203ENST00000468565 GRIN2CQ14957 1233 aa16.34■□□□□ 0.21
COL27A1-203ENST00000468565 TCTN1Q2MV58 587 aa16.34■□□□□ 0.21
COL27A1-203ENST00000468565 POTEBQ6S5H4 581 aa16.34■□□□□ 0.21
COL27A1-203ENST00000468565 HERC6Q8IVU3 1022 aa16.34■□□□□ 0.21
COL27A1-203ENST00000468565 ATP8B4Q8TF62 1192 aa16.34■□□□□ 0.21
COL27A1-203ENST00000468565 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
COL27A1-203ENST00000468565 SLC28A3Q9HAS3 691 aa16.34■□□□□ 0.21
COL27A1-203ENST00000468565 PCDHA10Q9Y5I2 948 aa16.34■□□□□ 0.21
COL27A1-203ENST00000468565 COL1A2P08123 1366 aa16.34■□□□□ 0.21
COL27A1-203ENST00000468565 FSD2A1L4K1 749 aa16.33■□□□□ 0.21
COL27A1-203ENST00000468565 HBP1O60381 514 aa16.33■□□□□ 0.21
COL27A1-203ENST00000468565 PSAPP07602 524 aa16.33■□□□□ 0.21
COL27A1-203ENST00000468565 IGBP1P78318 339 aa16.33■□□□□ 0.21
COL27A1-203ENST00000468565 NSUN7Q8NE18 718 aaKnown RBP16.33■□□□□ 0.21
COL27A1-203ENST00000468565 DBF4BQ8NFT6 615 aa16.33■□□□□ 0.21
COL27A1-203ENST00000468565 MYLIPQ8WY64 445 aa16.33■□□□□ 0.21
COL27A1-203ENST00000468565 UIMC1Q96RL1 719 aa16.33■□□□□ 0.21
COL27A1-203ENST00000468565 PCDHA2Q9Y5H9 948 aa16.33■□□□□ 0.21
COL27A1-203ENST00000468565 MAFBQ9Y5Q3 323 aaPredicted RBP16.33■□□□□ 0.21
COL27A1-203ENST00000468565 CCDC194A0A1B0GVG4 234 aa16.33■□□□□ 0.2
COL27A1-203ENST00000468565 WDR64B1ANS9 1081 aa16.33■□□□□ 0.2
COL27A1-203ENST00000468565 KIF28PB7ZC32 967 aa16.33■□□□□ 0.2
COL27A1-203ENST00000468565 TDP2O95551 362 aa16.33■□□□□ 0.2
COL27A1-203ENST00000468565 MGAT3Q09327 533 aa16.33■□□□□ 0.2
COL27A1-203ENST00000468565 SWSAP1Q6NVH7 229 aa16.33■□□□□ 0.2
COL27A1-203ENST00000468565 PDXDC2PQ6P474 469 aa16.33■□□□□ 0.2
COL27A1-203ENST00000468565 SEPT8Q92599 483 aa16.33■□□□□ 0.2
COL27A1-203ENST00000468565 APBB2Q92870 758 aa16.33■□□□□ 0.2
COL27A1-203ENST00000468565 TEKT3Q9BXF9 490 aa16.33■□□□□ 0.2
COL27A1-203ENST00000468565 LIMCH1Q9UPQ0 1083 aa16.33■□□□□ 0.2
COL27A1-203ENST00000468565 IGSF9BQ9UPX0 1349 aa16.32■□□□□ 0.2
COL27A1-203ENST00000468565 GAS7O60861 476 aa16.32■□□□□ 0.2
COL27A1-203ENST00000468565 CHRNA1P02708 482 aa16.32■□□□□ 0.2
COL27A1-203ENST00000468565 MYOGP15173 224 aa16.32■□□□□ 0.2
COL27A1-203ENST00000468565 INF2Q27J81 1249 aa16.32■□□□□ 0.2
COL27A1-203ENST00000468565 DNAJB3Q8WWF6 145 aa16.32■□□□□ 0.2
COL27A1-203ENST00000468565 GJB4Q9NTQ9 266 aa16.32■□□□□ 0.2
COL27A1-203ENST00000468565 CHD9Q3L8U1 2897 aa16.32■□□□□ 0.2
COL27A1-203ENST00000468565 SFNP31947 248 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 DEFB103AP81534 67 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 ST3GAL1Q11201 340 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 ZNF484Q5JVG2 852 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 LRCH2Q5VUJ6 765 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 PPP2R2DQ66LE6 453 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 NEK8Q86SG6 692 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 BBXQ8WY36 941 aaPredicted RBP16.31■□□□□ 0.2
COL27A1-203ENST00000468565 BRMS1Q9HCU9 246 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 DISC1Q9NRI5 854 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 SMIM35A0A1B0GVV1 85 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 DTNBO60941 627 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 PSMD10O75832 226 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 FOSL2P15408 326 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 GCFC2P16383 781 aaKnown RBP16.31■□□□□ 0.2
COL27A1-203ENST00000468565 ATP4AP20648 1035 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 JAK3P52333 1124 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 MRPS6P82932 125 aaKnown RBP16.31■□□□□ 0.2
COL27A1-203ENST00000468565 PPP4R3AQ6IN85 833 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 MTHFD1LQ6UB35 978 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 RDM1Q8NG50 284 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 ETNPPLQ8TBG4 499 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 TRAPPC12Q8WVT3 735 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms