RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 IFNL1Q8IU54 200 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 NEK9Q8TD19 979 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 MRFAP1L1Q96HT8 127 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 PCYT2Q99447 389 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 PANK4Q9NVE7 773 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 NRBP1Q9UHY1 535 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 DACH1Q9UI36 760 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 PPME1Q9Y570 386 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 FARP2O94887 1054 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-208ENST00000468300 IGHA2P01877 340 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 ADORA2AP29274 412 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 ZNF131P52739 623 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 FANCCQ00597 558 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 KRT76Q01546 638 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 PAK1Q13153 545 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 GRB14Q14449 540 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 FAM110CQ1W6H9 321 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 CCDC144BQ3MJ40 725 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 ZCWPW2Q504Y3 356 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 CENPPQ6IPU0 288 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 ANO5Q75V66 913 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 GPR142Q7Z601 462 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 CREBRFQ8IUR6 639 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 C4orf19Q8IY42 314 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 SMCR8Q8TEV9 937 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-208ENST00000468300 CEP89Q96ST8 783 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 XPO4Q9C0E2 1151 aaKnown RBP9.18□□□□□ -0.94
BRCA1-208ENST00000468300 EXOC1Q9NV70 894 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 DBR1Q9UK59 544 aaKnown RBP9.18□□□□□ -0.94
BRCA1-208ENST00000468300 BRCA2P51587 3418 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 ZNF500O60304 480 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-208ENST00000468300 SORBS3O60504 671 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 CTGFP29279 349 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 QARSP47897 775 aaKnown RBP9.18□□□□□ -0.94
BRCA1-208ENST00000468300 ACTR2P61160 394 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 LY6KQ17RY6 165 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 SEPT14Q6ZU15 432 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 CCDC60Q8IWA6 550 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-208ENST00000468300 ABRAQ8N0Z2 381 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 NACC1Q96RE7 527 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 PARK7Q99497 189 aaKnown RBP9.18□□□□□ -0.94
BRCA1-208ENST00000468300 JPH1Q9HDC5 661 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-208ENST00000468300 ZCCHC17Q9NP64 241 aaKnown RBP9.18□□□□□ -0.94
BRCA1-208ENST00000468300 IGSF9BQ9UPX0 1349 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 GSTTP1A0A1W2PQM5 241 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 WDR64B1ANS9 1081 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 SFNP31947 248 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 RARRES1P49788 294 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 JAK3P52333 1124 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 PSMD2Q13200 908 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 KCTD2Q14681 263 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 LRRC41Q15345 812 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 TAPT1Q6NXT6 567 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 C17orf99Q6UX52 265 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 CYFIP1Q7L576 1253 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 RDM1Q8NG50 284 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 SCFD1Q8WVM8 642 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 TRIM44Q96DX7 344 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-208ENST00000468300 STRA6Q9BX79 667 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 LRRC27Q9C0I9 530 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 KCTD10Q9H3F6 313 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 ZSWIM4Q9H7M6 989 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 PDLIM7Q9NR12 457 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 PDGFCQ9NRA1 345 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 IFNKQ9P0W0 207 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 SLC9A2Q9UBY0 812 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 ADD3Q9UEY8 706 aaKnown RBP9.17□□□□□ -0.94
BRCA1-208ENST00000468300 DDX41Q9UJV9 622 aaKnown RBP9.17□□□□□ -0.94
BRCA1-208ENST00000468300 MYH9P35579 1960 aaKnown RBP9.17□□□□□ -0.94
BRCA1-208ENST00000468300 SIP14410 1827 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 MANSC4A6NHS7 340 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-208ENST00000468300 LRRC10BA6NIK2 292 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 SSBP05455 408 aaKnown RBP eCLIP9.17□□□□□ -0.94
BRCA1-208ENST00000468300 MORN1Q5T089 497 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 EEPD1Q7L9B9 569 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 SMAP1Q8IYB5 467 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-208ENST00000468300 DHTKD1Q96HY7 919 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-208ENST00000468300 SH2D3AQ9BRG2 576 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 TRIM5Q9C035 493 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 KCNF1Q9H3M0 494 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 CPA4Q9UI42 421 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 PCDHA10Q9Y5I2 948 aa9.17□□□□□ -0.94
BRCA1-208ENST00000468300 MAFBQ9Y5Q3 323 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-208ENST00000468300 BACH1O14867 736 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 SNAI1O95863 264 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-208ENST00000468300 YWHABP31946 246 aaKnown RBP9.16□□□□□ -0.94
BRCA1-208ENST00000468300 TM4SF4P48230 202 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 PSMC5P62195 406 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 PTPN21Q16825 1174 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-208ENST00000468300 FBXO16Q8IX29 292 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-208ENST00000468300 GUF1Q8N442 669 aaKnown RBP9.16□□□□□ -0.94
BRCA1-208ENST00000468300 SMC1BQ8NDV3 1235 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 NPLOC4Q8TAT6 608 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 USP6NLQ92738 828 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 P2RX5Q93086 422 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 HHIPL1Q96JK4 782 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 CDHR1Q96JP9 859 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 TBC1D7Q9P0N9 293 aa9.16□□□□□ -0.94
BRCA1-208ENST00000468300 ZMYM2Q9UBW7 1377 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms