RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 ZBTB44Q8NCP5 570 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 SSH3Q8TE77 659 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 SETD4Q9NVD3 440 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 DZANK1Q9NVP4 752 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 MTMR7Q9Y216 660 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 DENND4AQ7Z401 1863 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 IGF2RP11717 2491 aa13.71□□□□□ -0.21
VPS26A-204ENST00000467852 TMEM8BA6NDV4 472 aa13.7□□□□□ -0.22
VPS26A-204ENST00000467852 LILRB5O75023 590 aa13.7□□□□□ -0.22
VPS26A-204ENST00000467852 LRP3O75074 770 aa13.7□□□□□ -0.22
VPS26A-204ENST00000467852 EIF3JO75822 258 aaKnown RBP13.7□□□□□ -0.22
VPS26A-204ENST00000467852 SCG2P13521 617 aa13.7□□□□□ -0.22
VPS26A-204ENST00000467852 SLC16A2P36021 539 aa13.7□□□□□ -0.22
VPS26A-204ENST00000467852 PLCB3Q01970 1234 aa13.7□□□□□ -0.22
VPS26A-204ENST00000467852 HSDL1Q3SXM5 330 aa13.7□□□□□ -0.22
VPS26A-204ENST00000467852 SYDE2Q5VT97 1194 aa13.7□□□□□ -0.22
VPS26A-204ENST00000467852 TSHZ1Q6ZSZ6 1077 aa13.7□□□□□ -0.22
VPS26A-204ENST00000467852 RSPH3Q86UC2 560 aa13.7□□□□□ -0.22
VPS26A-204ENST00000467852 RGS22Q8NE09 1264 aa13.7□□□□□ -0.22
VPS26A-204ENST00000467852 PJA1Q8NG27 643 aa13.7□□□□□ -0.22
VPS26A-204ENST00000467852 LINC01599Q8WXQ3 324 aa13.7□□□□□ -0.22
VPS26A-204ENST00000467852 BCO2Q9BYV7 579 aa13.7□□□□□ -0.22
VPS26A-204ENST00000467852 NOP58Q9Y2X3 529 aaKnown RBP13.7□□□□□ -0.22
VPS26A-204ENST00000467852 DSPP15924 2871 aaKnown RBP13.7□□□□□ -0.22
VPS26A-204ENST00000467852 HELZ2Q9BYK8 2649 aaKnown RBP13.69□□□□□ -0.22
VPS26A-204ENST00000467852 SRRM3A6NNA2 597 aaPredicted RBP13.69□□□□□ -0.22
VPS26A-204ENST00000467852 SORBS3O60504 671 aa13.69□□□□□ -0.22
VPS26A-204ENST00000467852 BCAR3O75815 825 aa13.69□□□□□ -0.22
VPS26A-204ENST00000467852 SRFP11831 508 aa13.69□□□□□ -0.22
VPS26A-204ENST00000467852 GLULP15104 373 aa13.69□□□□□ -0.22
VPS26A-204ENST00000467852 ARHGAP4P98171 946 aa13.69□□□□□ -0.22
VPS26A-204ENST00000467852 ATP8B2P98198 1209 aa13.69□□□□□ -0.22
VPS26A-204ENST00000467852 KRT17Q04695 432 aa13.69□□□□□ -0.22
VPS26A-204ENST00000467852 FBXO47Q5MNV8 452 aa13.69□□□□□ -0.22
VPS26A-204ENST00000467852 CELF3Q5SZQ8 465 aaKnown RBP13.69□□□□□ -0.22
VPS26A-204ENST00000467852 GIMAP6Q6P9H5 292 aa13.69□□□□□ -0.22
VPS26A-204ENST00000467852 KCNV1Q6PIU1 500 aa13.69□□□□□ -0.22
VPS26A-204ENST00000467852 RTN4RL1Q86UN2 441 aaPredicted RBP13.69□□□□□ -0.22
VPS26A-204ENST00000467852 ARHGEF3Q9NR81 526 aa13.69□□□□□ -0.22
VPS26A-204ENST00000467852 STX8Q9UNK0 236 aa13.69□□□□□ -0.22
VPS26A-204ENST00000467852 PCDHB7Q9Y5E2 793 aa13.69□□□□□ -0.22
VPS26A-204ENST00000467852 PLIN4Q96Q06 1357 aa13.69□□□□□ -0.22
VPS26A-204ENST00000467852 TBKBP1A7MCY6 615 aa13.68□□□□□ -0.22
VPS26A-204ENST00000467852 CLASP2O75122 1294 aaKnown RBP13.68□□□□□ -0.22
VPS26A-204ENST00000467852 LAG3P18627 525 aa13.68□□□□□ -0.22
VPS26A-204ENST00000467852 IBSPP21815 317 aaPredicted RBP13.68□□□□□ -0.22
VPS26A-204ENST00000467852 TFAP4Q01664 338 aa13.68□□□□□ -0.22
VPS26A-204ENST00000467852 SMC1AQ14683 1233 aaKnown RBP13.68□□□□□ -0.22
VPS26A-204ENST00000467852 BMS1Q14692 1282 aaKnown RBP13.68□□□□□ -0.22
VPS26A-204ENST00000467852 UBE3CQ15386 1083 aa13.68□□□□□ -0.22
VPS26A-204ENST00000467852 TAF2Q6P1X5 1199 aa13.68□□□□□ -0.22
VPS26A-204ENST00000467852 DCLRE1AQ6PJP8 1040 aa13.68□□□□□ -0.22
VPS26A-204ENST00000467852 BTNL9Q6UXG8 535 aa13.68□□□□□ -0.22
VPS26A-204ENST00000467852 TMEM87AQ8NBN3 555 aa13.68□□□□□ -0.22
VPS26A-204ENST00000467852 DCAF4Q8WV16 495 aa13.68□□□□□ -0.22
VPS26A-204ENST00000467852 TAAR1Q96RJ0 339 aa13.68□□□□□ -0.22
VPS26A-204ENST00000467852 MLXIPQ9HAP2 919 aa13.68□□□□□ -0.22
VPS26A-204ENST00000467852 TYW1Q9NV66 732 aaKnown RBP13.68□□□□□ -0.22
VPS26A-204ENST00000467852 ANKFY1Q9P2R3 1169 aa13.68□□□□□ -0.22
VPS26A-204ENST00000467852 MYH7P12883 1935 aa13.68□□□□□ -0.22
VPS26A-204ENST00000467852 PATJQ8NI35 1801 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 LOXHD1Q8IVV2 1947 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 FOXD2O60548 495 aaPredicted RBP13.67□□□□□ -0.22
VPS26A-204ENST00000467852 GGPS1O95749 300 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 LGALS2P05162 132 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 CD52P31358 61 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 CA8P35219 290 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 MGAT3Q09327 533 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 ARHGEF16Q5VV41 709 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 LAIR1Q6GTX8 287 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 TTBK2Q6IQ55 1244 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 KANK3Q6NY19 840 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 TMC5Q6UXY8 1006 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 PRR23CQ6ZRP0 262 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 SLC44A3Q8N4M1 653 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 MRPL43Q8N983 215 aaKnown RBP13.67□□□□□ -0.22
VPS26A-204ENST00000467852 GPR152Q8TDT2 470 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 SHDQ96IW2 340 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 RMDN3Q96TC7 470 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 USP26Q9BXU7 913 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 FOXQ1Q9C009 403 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 MAF1Q9H063 256 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 SEMA4GQ9NTN9 838 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 PAG1Q9NWQ8 432 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 METRNQ9UJH8 293 aa13.67□□□□□ -0.22
VPS26A-204ENST00000467852 C2orf71A6NGG8 1288 aa13.66□□□□□ -0.22
VPS26A-204ENST00000467852 RETP07949 1114 aa13.66□□□□□ -0.22
VPS26A-204ENST00000467852 ADAM17P78536 824 aa13.66□□□□□ -0.22
VPS26A-204ENST00000467852 RSAD2Q8WXG1 361 aa13.66□□□□□ -0.22
VPS26A-204ENST00000467852 SLC39A7Q92504 469 aa13.66□□□□□ -0.22
VPS26A-204ENST00000467852 NXPE3Q969Y0 559 aa13.66□□□□□ -0.22
VPS26A-204ENST00000467852 AGO3Q9H9G7 860 aaKnown RBP13.66□□□□□ -0.22
VPS26A-204ENST00000467852 CCDC171Q6TFL3 1326 aa13.65□□□□□ -0.22
VPS26A-204ENST00000467852 WDR19Q8NEZ3 1342 aa13.65□□□□□ -0.22
VPS26A-204ENST00000467852 GSG1L2A8MUP6 293 aa13.65□□□□□ -0.22
VPS26A-204ENST00000467852 GDF9O60383 454 aa13.65□□□□□ -0.22
VPS26A-204ENST00000467852 LRRN2O75325 713 aa13.65□□□□□ -0.22
VPS26A-204ENST00000467852 C7P10643 843 aa13.65□□□□□ -0.22
VPS26A-204ENST00000467852 PTPN14Q15678 1187 aa13.65□□□□□ -0.22
VPS26A-204ENST00000467852 CSRP2Q16527 193 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms