RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 VMP1Q96GC9 406 aa6.64□□□□□ -1.35
LRCH3-212ENST00000466845 ZNF496Q96IT1 587 aaPredicted RBP6.64□□□□□ -1.35
LRCH3-212ENST00000466845 PAWRQ96IZ0 340 aaKnown RBP6.64□□□□□ -1.35
LRCH3-212ENST00000466845 FGD4Q96M96 766 aa6.64□□□□□ -1.35
LRCH3-212ENST00000466845 IWS1Q96ST2 819 aa6.64□□□□□ -1.35
LRCH3-212ENST00000466845 DCAF16Q9NXF7 216 aa6.64□□□□□ -1.35
LRCH3-212ENST00000466845 HOXC10Q9NYD6 342 aa6.64□□□□□ -1.35
LRCH3-212ENST00000466845 SUSD2Q9UGT4 822 aa6.64□□□□□ -1.35
LRCH3-212ENST00000466845 EMC9Q9Y3B6 208 aa6.64□□□□□ -1.35
LRCH3-212ENST00000466845 IRS2Q9Y4H2 1338 aa6.64□□□□□ -1.35
LRCH3-212ENST00000466845 IQGAP2Q13576 1575 aa6.64□□□□□ -1.35
LRCH3-212ENST00000466845 GOLGA6L3A6NEY3 463 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 PRRT4C9JH25 899 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 ORC4O43929 436 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 HNRNPCP07910 306 aaKnown RBP eCLIP6.63□□□□□ -1.35
LRCH3-212ENST00000466845 DBHP09172 617 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 CCDC159P0C7I6 412 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 CCDC172P0C7W6 258 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 CDR1P51861 262 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 DMTNQ08495 405 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 SLC9A5Q14940 896 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 KIR3DS1Q14943 382 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 DDB1Q16531 1140 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 NFE2Q16621 373 aaPredicted RBP6.63□□□□□ -1.35
LRCH3-212ENST00000466845 SLC4A8Q2Y0W8 1093 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 ANKRD45Q5TZF3 282 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 ERAP2Q6P179 960 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 C16orf54Q6UWD8 224 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 HDGFL2Q7Z4V5 671 aaPredicted RBP6.63□□□□□ -1.35
LRCH3-212ENST00000466845 BRSK2Q8IWQ3 736 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 SAMD14Q8IZD0 417 aaPredicted RBP6.63□□□□□ -1.35
LRCH3-212ENST00000466845 ARL6IP6Q8N6S5 226 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 GIMAP1Q8WWP7 306 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 NELL1Q92832 810 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 MPP4Q96JB8 637 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 RNF38Q9H0F5 515 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 DHX36Q9H2U1 1008 aaKnown RBP6.63□□□□□ -1.35
LRCH3-212ENST00000466845 CHCHD3Q9NX63 227 aaKnown RBP6.63□□□□□ -1.35
LRCH3-212ENST00000466845 NUDT5Q9UKK9 219 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 PCDHA5Q9Y5H7 936 aa6.63□□□□□ -1.35
LRCH3-212ENST00000466845 RAPGEF2Q9Y4G8 1499 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 TMEM110-MUSTN1A8MSY1 372 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 C19orf81C9J6K1 198 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 DIAPH1O60610 1272 aaKnown RBP6.62□□□□□ -1.35
LRCH3-212ENST00000466845 ZBTB7AO95365 584 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 SDHBP21912 280 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 INHBEP58166 350 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 PLEKHN1Q494U1 663 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-212ENST00000466845 ALFQ53S48 1182 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 CT47A1Q5JQC4 288 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-212ENST00000466845 SPECC1Q5M775 1068 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 CNKSR3Q6P9H4 555 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 TTLL10Q6ZVT0 673 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 FAM169BQ8N8A8 192 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 NETO2Q8NC67 525 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 SMCR8Q8TEV9 937 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-212ENST00000466845 ZFPM2Q8WW38 1151 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 DACT3Q96B18 629 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-212ENST00000466845 CHMP4CQ96CF2 233 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 CCDC140Q96MF4 163 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 ZNF396Q96N95 335 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-212ENST00000466845 MMP19Q99542 508 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 RIC8AQ9NPQ8 531 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 CYP26B1Q9NR63 512 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 COMMD8Q9NX08 183 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 ACTR10Q9NZ32 417 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.62□□□□□ -1.35
LRCH3-212ENST00000466845 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-212ENST00000466845 PRKAG3Q9UGI9 489 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 PGAP2Q9UHJ9 254 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 FBXO2Q9UK22 296 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-212ENST00000466845 IKBKGQ9Y6K9 419 aa6.62□□□□□ -1.35
LRCH3-212ENST00000466845 IL16Q14005 1332 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 NPHP3-ACAD11A0A0J9YXS1 232 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 GTPBP10A4D1E9 387 aaKnown RBP6.61□□□□□ -1.35
LRCH3-212ENST00000466845 FIBPO43427 364 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 NPHS1O60500 1241 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 TCEA3O75764 348 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 MSL3P1P0C860 447 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 ZNF853P0CG23 659 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 ARID5AQ03989 594 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 LRRC41Q15345 812 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 FXNQ16595 210 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 DPY19L1Q2PZI1 675 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 AMOTQ4VCS5 1084 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 FAM133BQ5BKY9 247 aaKnown RBP6.61□□□□□ -1.35
LRCH3-212ENST00000466845 CCDC158Q5M9N0 1113 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 LCE1DQ5T752 114 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 LMBRD2Q68DH5 695 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-212ENST00000466845 LZTR1Q8N653 840 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 COPS5Q92905 334 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 PEX11GQ96HA9 241 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 EPN3Q9H201 632 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 TSPY26PQ9H489 355 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 HOMER2Q9NSB8 354 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 USP25Q9UHP3 1055 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 TAGLN3Q9UI15 199 aa6.61□□□□□ -1.35
LRCH3-212ENST00000466845 XPO7Q9UIA9 1087 aaKnown RBP6.61□□□□□ -1.35
LRCH3-212ENST00000466845 DBR1Q9UK59 544 aaKnown RBP6.61□□□□□ -1.35
LRCH3-212ENST00000466845 ADCY10Q96PN6 1610 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms