RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 HOXA13P31271 388 aaPredicted RBP10.79□□□□□ -0.68
ATG3-203ENST00000465980 GRM4Q14833 912 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 STXBP2Q15833 593 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 NBPF20Q3BBV1 942 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 ARHGEF16Q5VV41 709 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 CATIPQ7Z7H3 387 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 MICU3Q86XE3 530 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 NSUN7Q8NE18 718 aaKnown RBP10.79□□□□□ -0.68
ATG3-203ENST00000465980 SMARCC2Q8TAQ2 1214 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 AFG1LQ8WV93 481 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 MYLIPQ8WY64 445 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 SCLYQ96I15 445 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 PIGSQ96S52 555 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 CDX2Q99626 313 aaPredicted RBP10.79□□□□□ -0.68
ATG3-203ENST00000465980 MTG1Q9BT17 334 aaPredicted RBP10.79□□□□□ -0.68
ATG3-203ENST00000465980 MYL10Q9BUA6 226 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 WNT8AQ9H1J5 351 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 SEMA6BQ9H3T3 888 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 NCOA5Q9HCD5 579 aaKnown RBP10.79□□□□□ -0.68
ATG3-203ENST00000465980 IL23AQ9NPF7 189 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 PXMP2Q9NR77 195 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 PCDHA1Q9Y5I3 950 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 PTPRSQ13332 1948 aa10.79□□□□□ -0.68
ATG3-203ENST00000465980 A6NJR5 290 aa10.78□□□□□ -0.68
ATG3-203ENST00000465980 ZBTB5O15062 677 aa10.78□□□□□ -0.68
ATG3-203ENST00000465980 CTDNEP1O95476 244 aa10.78□□□□□ -0.68
ATG3-203ENST00000465980 GJB2P29033 226 aa10.78□□□□□ -0.68
ATG3-203ENST00000465980 CLK2P49760 499 aaKnown RBP10.78□□□□□ -0.68
ATG3-203ENST00000465980 HSD17B4P51659 736 aa10.78□□□□□ -0.68
ATG3-203ENST00000465980 HMGN5P82970 282 aaKnown RBP10.78□□□□□ -0.68
ATG3-203ENST00000465980 TROAPQ12815 778 aa10.78□□□□□ -0.68
ATG3-203ENST00000465980 CCDC62Q6P9F0 684 aa10.78□□□□□ -0.68
ATG3-203ENST00000465980 PSRC1Q6PGN9 363 aaPredicted RBP10.78□□□□□ -0.68
ATG3-203ENST00000465980 FCHSD1Q86WN1 690 aa10.78□□□□□ -0.68
ATG3-203ENST00000465980 CCDC116Q8IYX3 515 aa10.78□□□□□ -0.68
ATG3-203ENST00000465980 IL31RAQ8NI17 732 aa10.78□□□□□ -0.68
ATG3-203ENST00000465980 MAP3K14Q99558 947 aa10.78□□□□□ -0.68
ATG3-203ENST00000465980 BRWD1Q9NSI6 2320 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.77□□□□□ -0.69
ATG3-203ENST00000465980 CCDC196A0A1B0GTZ2 297 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.77□□□□□ -0.69
ATG3-203ENST00000465980 ZBBXA8MT70 800 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 CPLX1O14810 134 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 CYTH3O43739 400 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 CDKL5O76039 1030 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 GH1P01241 217 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 MMP3P08254 477 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 PDIA4P13667 645 aaKnown RBP10.77□□□□□ -0.69
ATG3-203ENST00000465980 RXRAP19793 462 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 CDC27P30260 824 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 ADD1P35611 737 aaKnown RBP10.77□□□□□ -0.69
ATG3-203ENST00000465980 NUCB2P80303 420 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 ARHGAP1Q07960 439 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 RTN1Q16799 776 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 CPLX2Q6PUV4 134 aaKnown RBP10.77□□□□□ -0.69
ATG3-203ENST00000465980 OTOP2Q7RTS6 562 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 DEFB128Q7Z7B8 93 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 RAB11FIP4Q86YS3 637 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 FANCBQ8NB91 859 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 MTMR8Q96EF0 704 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 IWS1Q96ST2 819 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 RBM28Q9NW13 759 aaKnown RBP10.77□□□□□ -0.69
ATG3-203ENST00000465980 CXXC1Q9P0U4 656 aaPredicted RBP10.77□□□□□ -0.69
ATG3-203ENST00000465980 DNMT3LQ9UJW3 386 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 NOD1Q9Y239 953 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 MRVI1Q9Y6F6 885 aa10.77□□□□□ -0.69
ATG3-203ENST00000465980 PRRC2BQ5JSZ5 2229 aaKnown RBP10.77□□□□□ -0.69
ATG3-203ENST00000465980 JAK2O60674 1132 aa10.76□□□□□ -0.69
ATG3-203ENST00000465980 FGBP02675 491 aa10.76□□□□□ -0.69
ATG3-203ENST00000465980 SUPT20HL2P0C7V6 817 aa10.76□□□□□ -0.69
ATG3-203ENST00000465980 ZNF286BP0CG31 522 aa10.76□□□□□ -0.69
ATG3-203ENST00000465980 FOSL2P15408 326 aa10.76□□□□□ -0.69
ATG3-203ENST00000465980 IFNAR1P17181 557 aa10.76□□□□□ -0.69
ATG3-203ENST00000465980 PDCP20941 246 aa10.76□□□□□ -0.69
ATG3-203ENST00000465980 NTRK3Q16288 839 aa10.76□□□□□ -0.69
ATG3-203ENST00000465980 MAFAQ8NHW3 353 aaPredicted RBP10.76□□□□□ -0.69
ATG3-203ENST00000465980 CTCFLQ8NI51 663 aaPredicted RBP10.76□□□□□ -0.69
ATG3-203ENST00000465980 TIFAQ96CG3 184 aa10.76□□□□□ -0.69
ATG3-203ENST00000465980 PDCD2LQ9BRP1 358 aa10.76□□□□□ -0.69
ATG3-203ENST00000465980 SEZ6LQ9BYH1 1024 aa10.76□□□□□ -0.69
ATG3-203ENST00000465980 RIOX1Q9H6W3 641 aa10.76□□□□□ -0.69
ATG3-203ENST00000465980 KIF3AQ9Y496 699 aa10.76□□□□□ -0.69
ATG3-203ENST00000465980 PNMA6FA0A0J9YX94 578 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 GCOM1H8Y6P7 765 aaPredicted RBP10.75□□□□□ -0.69
ATG3-203ENST00000465980 RBAK-RBAKDNI3L0D1 243 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 DLL1O00548 723 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 KPNA6O60684 536 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 EIF3JO75822 258 aaKnown RBP10.75□□□□□ -0.69
ATG3-203ENST00000465980 BRD1O95696 1058 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 POLR2MP0CAP2 368 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 FDPSP14324 419 aaKnown RBP10.75□□□□□ -0.69
ATG3-203ENST00000465980 SYT1P21579 422 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 KIF5BP33176 963 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 GRIN2CQ14957 1233 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.75□□□□□ -0.69
ATG3-203ENST00000465980 RASIP1Q5U651 963 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 NFRKBQ6P4R8 1299 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 DHX37Q8IY37 1157 aaKnown RBP10.75□□□□□ -0.69
ATG3-203ENST00000465980 FAM184AQ8NB25 1140 aa10.75□□□□□ -0.69
ATG3-203ENST00000465980 HERVK_113Q902F9 699 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms