RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 KLK7P49862 253 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 GABPB1Q06547 395 aaPredicted RBP23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 TMEM132BQ14DG7 1078 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 SULF1Q8IWU6 871 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 BANK1Q8NDB2 785 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 SEL1LQ9UBV2 794 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 ODF2LQ9ULJ1 636 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 SIK3Q9Y2K2 1263 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 A0A0G2JMZ2 1700 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 PDXKO00764 312 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 ZBTB39O15060 712 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 CALUO43852 315 aaPredicted RBP23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 MYBP10242 640 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 H2AFXP16104 143 aaPredicted RBP23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 CCND2P30279 289 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 ADAM9Q13443 819 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 TEX13BQ9BXU2 312 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 ZSWIM4Q9H7M6 989 aa23.98■■□□□ 1.43
PDLIM2-216ENST00000464275 DOCK5Q9H7D0 1870 aa23.97■■□□□ 1.43
PDLIM2-216ENST00000464275 ARHGEF35A5YM69 484 aa23.97■■□□□ 1.43
PDLIM2-216ENST00000464275 EIF3DO15371 548 aaKnown RBP eCLIP23.97■■□□□ 1.43
PDLIM2-216ENST00000464275 PRPF6O94906 941 aaKnown RBP23.97■■□□□ 1.43
PDLIM2-216ENST00000464275 VGLL4Q14135 290 aa23.97■■□□□ 1.43
PDLIM2-216ENST00000464275 PARVGQ9HBI0 331 aa23.97■■□□□ 1.43
PDLIM2-216ENST00000464275 TYW1Q9NV66 732 aaKnown RBP23.97■■□□□ 1.43
PDLIM2-216ENST00000464275 SPDYE4A6NLX3 237 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 PPP1R12BO60237 982 aaPredicted RBP23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 GCNT3O95395 438 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 HOXD13P35453 343 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 MEA1Q16626 185 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 FBXO38Q6PIJ6 1188 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 MYCT1Q8N699 235 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 SYT17Q9BSW7 474 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 ACAD9Q9H845 621 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 AGPAT5Q9NUQ2 364 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 ARGLU1Q9NWB6 273 aaPredicted RBP23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 ZNHIT6Q9NWK9 470 aaKnown RBP23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 FAM53CQ9NYF3 392 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 SPDYE16A6NNV3 312 aaPredicted RBP23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 EFCAB8A8MWE9 144 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 GUCY2CP25092 1073 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 ZNF131P52739 623 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 VSIG10LQ86VR7 867 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 TRIM59Q8IWR1 403 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 KRT222Q8N1A0 295 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 MNS1Q8NEH6 495 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 CHP1Q99653 195 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 FAM184BQ9ULE4 1060 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 CSADQ9Y600 493 aa23.96■■□□□ 1.43
PDLIM2-216ENST00000464275 UBE4BO95155 1302 aa23.95■■□□□ 1.43
PDLIM2-216ENST00000464275 DBR1Q9UK59 544 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-216ENST00000464275 ADM5C9JUS6 153 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 LYPLA2O95372 231 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 NR3C2P08235 984 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 NR2F2P24468 414 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 QARSP47897 775 aaKnown RBP23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 JAK3P52333 1124 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 WDR59Q6PJI9 974 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 NLRX1Q86UT6 975 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 NSUN6Q8TEA1 469 aaKnown RBP23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 UBXN4Q92575 508 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 GPRASP2Q96D09 838 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 PURBQ96QR8 312 aaKnown RBP23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 SAMM50Q9Y512 469 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 EPN1Q9Y6I3 576 aaPredicted RBP23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 TESPA1A2RU30 521 aaPredicted RBP23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 SFI1A8K8P3 1242 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 MAFGO15525 162 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 SFNP31947 248 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 GNG11P61952 73 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 FAM193AP78312 1265 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 KRT76Q01546 638 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 C9orf131Q5VYM1 1079 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 EDEM3Q9BZQ6 932 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 POLD4Q9HCU8 107 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 TCEAL9Q9UHQ7 104 aa23.94■■□□□ 1.42
PDLIM2-216ENST00000464275 RPL13P26373 211 aaKnown RBP23.93■■□□□ 1.42
PDLIM2-216ENST00000464275 CASQ1P31415 396 aa23.93■■□□□ 1.42
PDLIM2-216ENST00000464275 IREB2P48200 963 aaKnown RBP23.93■■□□□ 1.42
PDLIM2-216ENST00000464275 CDK17Q00537 523 aa23.93■■□□□ 1.42
PDLIM2-216ENST00000464275 STXBP4Q6ZWJ1 553 aa23.93■■□□□ 1.42
PDLIM2-216ENST00000464275 FRMD5Q7Z6J6 570 aa23.93■■□□□ 1.42
PDLIM2-216ENST00000464275 ACRBPQ8NEB7 543 aa23.93■■□□□ 1.42
PDLIM2-216ENST00000464275 MMRN2Q9H8L6 949 aa23.93■■□□□ 1.42
PDLIM2-216ENST00000464275 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.93■■□□□ 1.42
PDLIM2-216ENST00000464275 ARID2Q68CP9 1835 aa23.93■■□□□ 1.42
PDLIM2-216ENST00000464275 MYH9P35579 1960 aaKnown RBP23.93■■□□□ 1.42
PDLIM2-216ENST00000464275 NDUFA10O95299 355 aa23.92■■□□□ 1.42
PDLIM2-216ENST00000464275 YBX3P16989 372 aaKnown RBP eCLIP23.92■■□□□ 1.42
PDLIM2-216ENST00000464275 RDM1Q8NG50 284 aa23.92■■□□□ 1.42
PDLIM2-216ENST00000464275 BCAS3Q9H6U6 928 aa23.92■■□□□ 1.42
PDLIM2-216ENST00000464275 CYP39A1Q9NYL5 469 aa23.92■■□□□ 1.42
PDLIM2-216ENST00000464275 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.92■■□□□ 1.42
PDLIM2-216ENST00000464275 V9GYY5 206 aaPredicted RBP23.92■■□□□ 1.42
PDLIM2-216ENST00000464275 ASTN1O14525 1302 aa23.92■■□□□ 1.42
PDLIM2-216ENST00000464275 ATP9AO75110 1047 aa23.92■■□□□ 1.42
PDLIM2-216ENST00000464275 TADA3O75528 432 aa23.92■■□□□ 1.42
PDLIM2-216ENST00000464275 URI1O94763 535 aaPredicted RBP23.92■■□□□ 1.42
PDLIM2-216ENST00000464275 PLS1Q14651 629 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms