RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 PCDHA2Q9Y5H9 948 aa14.74□□□□□ -0.05
R3HDM1-213ENST00000463230 SCN5AQ14524 2016 aa14.74□□□□□ -0.05
R3HDM1-213ENST00000463230 TMEM265A0A087WTH1 108 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 SLC37A4O43826 429 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 THPOP40225 353 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 TRAPPC10P48553 1259 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 MIER3Q7Z3K6 550 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 SPOCK2Q92563 424 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 VWCEQ96DN2 955 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 UNC45AQ9H3U1 944 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 SAMM50Q9Y512 469 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 RSPH10B2B2RC85 870 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 DKC1O60832 514 aaKnown RBP eCLIP14.73□□□□□ -0.051e-20■■■□□ 18.6
R3HDM1-213ENST00000463230 CD2BP2O95400 341 aaKnown RBP14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 RSPH10BP0C881 870 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 ACRP10323 421 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 EARS2Q5JPH6 523 aaKnown RBP14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 MARCH8Q5T0T0 291 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 ZNF618Q5T7W0 954 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 CNKSR3Q6P9H4 555 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 ZNF710Q8N1W2 664 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 NME8Q8N427 588 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 WNT8BQ93098 351 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 PCDH10Q9P2E7 1040 aa14.73□□□□□ -0.05
R3HDM1-213ENST00000463230 SMIM35A0A1B0GVV1 85 aa14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 DTNBO60941 627 aa14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 NRBP2Q9NSY0 501 aa14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 GABBR1Q9UBS5 961 aa14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 VAV3Q9UKW4 847 aa14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 SOX1O00570 391 aaPredicted RBP14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 MARCH6O60337 910 aa14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 U2AF2P26368 475 aaKnown RBP eCLIP14.72□□□□□ -0.052e-7■□□□□ 10.9
R3HDM1-213ENST00000463230 FOSBP53539 338 aa14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 CUL4AQ13619 759 aa14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 NOSTRINQ8IVI9 506 aa14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 CKAP2LQ8IYA6 745 aa14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 PHOSPHO2Q8TCD6 241 aa14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 FTOQ9C0B1 505 aaKnown RBP eCLIP14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 NOL7Q9UMY1 257 aaKnown RBP14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 PPME1Q9Y570 386 aa14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 SQORQ9Y6N5 450 aa14.72□□□□□ -0.05
R3HDM1-213ENST00000463230 ABHD14A-ACY1A0A1B0GW23 586 aa14.71□□□□□ -0.05
R3HDM1-213ENST00000463230 FAM205CA6NFA0 338 aa14.71□□□□□ -0.05
R3HDM1-213ENST00000463230 MAGEB2O15479 319 aa14.71□□□□□ -0.05
R3HDM1-213ENST00000463230 NEMFO60524 1076 aa14.71□□□□□ -0.05
R3HDM1-213ENST00000463230 OATP04181 439 aa14.71□□□□□ -0.05
R3HDM1-213ENST00000463230 GNL2Q13823 731 aaKnown RBP14.71□□□□□ -0.05
R3HDM1-213ENST00000463230 DEFB128Q7Z7B8 93 aa14.71□□□□□ -0.05
R3HDM1-213ENST00000463230 HAS1Q92839 578 aa14.71□□□□□ -0.05
R3HDM1-213ENST00000463230 SLC9A7Q96T83 725 aa14.71□□□□□ -0.05
R3HDM1-213ENST00000463230 SMC3Q9UQE7 1217 aa14.71□□□□□ -0.05
R3HDM1-213ENST00000463230 NBNO60934 754 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 ATP4AP20648 1035 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 GUCY1B3Q02153 619 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 GPNMBQ14956 572 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 CALCRLQ16602 461 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 MTHFD1LQ6UB35 978 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 POTEDQ86YR6 584 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 APBB2Q92870 758 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 SLC4A7Q9Y6M7 1214 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 KDM3AQ9Y4C1 1321 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 CHMP2AO43633 222 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 XKR3Q5GH77 459 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 IER5Q5VY09 327 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 RUFY4Q6ZNE9 571 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 USP38Q8NB14 1042 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 NEK9Q8TD19 979 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 SEPT8Q92599 483 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 UIMC1Q96RL1 719 aa14.7□□□□□ -0.06
R3HDM1-213ENST00000463230 M0QZ92 97 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 SLC34A2O95436 690 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 GJB2P29033 226 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 PSMC5P62195 406 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 IGBP1P78318 339 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 MRPS6P82932 125 aaKnown RBP14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 PRKCEQ02156 737 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 MGAT3Q09327 533 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 EPHA7Q15375 998 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 RAB30Q15771 203 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 OTOP2Q7RTS6 562 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 NIFKQ9BYG3 293 aaKnown RBP14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 ZBTB42B2RXF5 422 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 ZNF862O60290 1169 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 KLRC1P26715 233 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 IKBKEQ14164 716 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 MBTPS1Q14703 1052 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 PLEKHG4Q58EX7 1191 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 INTS4Q96HW7 963 aaKnown RBP14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 LRCH3Q96II8 777 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 MTMR9Q96QG7 549 aa14.69□□□□□ -0.06
R3HDM1-213ENST00000463230 C22orf31O95567 290 aa14.68□□□□□ -0.06
R3HDM1-213ENST00000463230 P4HBP07237 508 aaKnown RBP14.68□□□□□ -0.06
R3HDM1-213ENST00000463230 QARSP47897 775 aaKnown RBP14.68□□□□□ -0.06
R3HDM1-213ENST00000463230 KCNJ6P48051 423 aa14.68□□□□□ -0.06
R3HDM1-213ENST00000463230 SPIRE1Q08AE8 756 aa14.68□□□□□ -0.06
R3HDM1-213ENST00000463230 EXOC8Q8IYI6 725 aa14.68□□□□□ -0.06
R3HDM1-213ENST00000463230 SPRYD3Q8NCJ5 442 aa14.68□□□□□ -0.06
R3HDM1-213ENST00000463230 TET1Q8NFU7 2136 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms