RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 PRKCQQ04759 706 aa8.23□□□□□ -1.09
TRAPPC10-205ENST00000461889 APOBRQ0VD83 1088 aa8.23□□□□□ -1.09
TRAPPC10-205ENST00000461889 BAATQ14032 418 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC10-205ENST00000461889 SIM2Q14190 667 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC10-205ENST00000461889 LETM2Q2VYF4 491 aa8.23□□□□□ -1.09
TRAPPC10-205ENST00000461889 PAN2Q504Q3 1202 aaKnown RBP8.23□□□□□ -1.09
TRAPPC10-205ENST00000461889 THNSL1Q8IYQ7 743 aa8.23□□□□□ -1.09
TRAPPC10-205ENST00000461889 C12orf50Q8NA57 414 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC10-205ENST00000461889 LSM14AQ8ND56 463 aaKnown RBP8.23□□□□□ -1.09
TRAPPC10-205ENST00000461889 MYADMQ96S97 322 aa8.23□□□□□ -1.09
TRAPPC10-205ENST00000461889 DCP1AQ9NPI6 582 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC10-205ENST00000461889 SYNPO2Q9UMS6 1093 aa8.23□□□□□ -1.09
TRAPPC10-205ENST00000461889 C2orf71A6NGG8 1288 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 FAM170BA6NMN3 283 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 LILRB3O75022 631 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 N4BP1O75113 896 aaKnown RBP8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 PPFIA4O75335 1185 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 CHRNA1P02708 482 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 CYP2D6P10635 497 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 RALBP1Q15311 655 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 SF3A2Q15428 464 aaKnown RBP8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 ZBTB41Q5SVQ8 909 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 KANK3Q6NY19 840 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 C16orf86Q6ZW13 317 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 RTN4RL1Q86UN2 441 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 COLGALT1Q8NBJ5 622 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 DNERQ8NFT8 737 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 PPTC7Q8NI37 304 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 LINC01599Q8WXQ3 324 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 MKL1Q969V6 931 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 NELL2Q99435 816 aa8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 CRNKL1Q9BZJ0 848 aaKnown RBP8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 MTF2Q9Y483 593 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 GREB1LQ9C091 1923 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC10-205ENST00000461889 B4DLN1 442 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 NCAM2O15394 837 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 PLA2G6O60733 806 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 ZNF286BP0CG31 522 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 CSRP1P21291 193 aaKnown RBP8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 ZAP70P43403 619 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 MRPL12P52815 198 aaKnown RBP8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 SMC1AQ14683 1233 aaKnown RBP8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 LPIN1Q14693 890 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 PPP2R5DQ14738 602 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 LY6KQ17RY6 165 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 TMC5Q6UXY8 1006 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 C15orf39Q6ZRI6 1047 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 TMC7Q7Z402 723 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 FAM160B2Q86V87 743 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 ZNF710Q8N1W2 664 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 CHURC1Q8WUH1 139 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 LRIG1Q96JA1 1093 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 FTHL17Q9BXU8 183 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 PCGF6Q9BYE7 350 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 LTB4R2Q9NPC1 389 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 NRCAMQ92823 1304 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 FANCIQ9NVI1 1328 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 LOXHD1Q8IVV2 1947 aa8.21□□□□□ -1.1
TRAPPC10-205ENST00000461889 ANHXE9PGG2 379 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 ATXN7O15265 892 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 HRO43593 1189 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 IDH1O75874 414 aaKnown RBP8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 GHRP10912 638 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 BMP3P12645 472 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 LAG3P18627 525 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 STAT2P52630 851 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 ATP8B2P98198 1209 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 EXOSC9Q06265 439 aaKnown RBP8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 LAMC2Q13753 1193 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 UBXN2BQ14CS0 331 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 CCDC158Q5M9N0 1113 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 TTC39AQ5SRH9 613 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 SPOUT1Q5T280 376 aaKnown RBP8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 SH3PXD2AQ5TCZ1 1133 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 C12orf60Q5U649 245 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 WWC1Q8IX03 1113 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 ZNF843Q8N446 348 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 FAM160A2Q8N612 972 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 GMCL1P1Q8NEA9 526 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 SLC22A17Q8WUG5 538 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 GLG1Q92896 1179 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 LOXL4Q96JB6 756 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 IER2Q9BTL4 223 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 USP26Q9BXU7 913 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 RHOBTB2Q9BYZ6 727 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 RNPEPQ9H4A4 650 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 SFXN1Q9H9B4 322 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 APC2O95996 2303 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 COL12A1Q99715 3063 aa8.2□□□□□ -1.1
TRAPPC10-205ENST00000461889 DOCK8Q8NF50 2099 aa8.19□□□□□ -1.1
TRAPPC10-205ENST00000461889 MAGEB6P1A0A0J9YX57 407 aa8.19□□□□□ -1.1
TRAPPC10-205ENST00000461889 CAPN8A6NHC0 703 aa8.19□□□□□ -1.1
TRAPPC10-205ENST00000461889 TMEM232C9JQI7 657 aa8.19□□□□□ -1.1
TRAPPC10-205ENST00000461889 HYAL3O43820 417 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC10-205ENST00000461889 GNAT1P11488 350 aa8.19□□□□□ -1.1
TRAPPC10-205ENST00000461889 SCG2P13521 617 aa8.19□□□□□ -1.1
TRAPPC10-205ENST00000461889 GATMP50440 423 aa8.19□□□□□ -1.1
TRAPPC10-205ENST00000461889 KRT17Q04695 432 aa8.19□□□□□ -1.1
TRAPPC10-205ENST00000461889 MGAT3Q09327 533 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms