RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 ICAM3P32942 547 aa17.62■□□□□ 0.41
SF3A3-203ENST00000461869 MRPS9P82933 396 aaKnown RBP17.62■□□□□ 0.41
SF3A3-203ENST00000461869 SAFBQ15424 915 aaKnown RBP eCLIP17.62■□□□□ 0.41
SF3A3-203ENST00000461869 CSPP1Q1MSJ5 1256 aa17.62■□□□□ 0.41
SF3A3-203ENST00000461869 SLC35G1Q2M3R5 365 aa17.62■□□□□ 0.41
SF3A3-203ENST00000461869 FOXD4L5Q5VV16 416 aaPredicted RBP17.62■□□□□ 0.41
SF3A3-203ENST00000461869 METTL7BQ6UX53 244 aa17.62■□□□□ 0.41
SF3A3-203ENST00000461869 CYFIP1Q7L576 1253 aa17.62■□□□□ 0.41
SF3A3-203ENST00000461869 CMTR1Q8N1G2 835 aaKnown RBP17.62■□□□□ 0.41
SF3A3-203ENST00000461869 FOXD4L4Q8WXT5 416 aaPredicted RBP17.62■□□□□ 0.41
SF3A3-203ENST00000461869 APBB2Q92870 758 aa17.62■□□□□ 0.41
SF3A3-203ENST00000461869 GPR20Q99678 358 aa17.62■□□□□ 0.41
SF3A3-203ENST00000461869 NSUN3Q9H649 340 aaKnown RBP17.62■□□□□ 0.41
SF3A3-203ENST00000461869 RTEL1Q9NZ71 1219 aa17.62■□□□□ 0.41
SF3A3-203ENST00000461869 SEC63Q9UGP8 760 aaKnown RBP17.62■□□□□ 0.41
SF3A3-203ENST00000461869 FAM50BQ9Y247 325 aa17.62■□□□□ 0.41
SF3A3-203ENST00000461869 MICAL3Q7RTP6 2002 aa17.62■□□□□ 0.41
SF3A3-203ENST00000461869 PNMA6FA0A0J9YX94 578 aa17.61■□□□□ 0.41
SF3A3-203ENST00000461869 SPATA31C2B4DYI2 1134 aa17.61■□□□□ 0.41
SF3A3-203ENST00000461869 hCG_1984214I3L0E3 225 aa17.61■□□□□ 0.41
SF3A3-203ENST00000461869 SCG2P13521 617 aa17.61■□□□□ 0.41
SF3A3-203ENST00000461869 PFKFB3Q16875 520 aaPredicted RBP17.61■□□□□ 0.41
SF3A3-203ENST00000461869 ZNF713Q8N859 430 aaPredicted RBP17.61■□□□□ 0.41
SF3A3-203ENST00000461869 RRP36Q96EU6 259 aaKnown RBP17.61■□□□□ 0.41
SF3A3-203ENST00000461869 INPP4AQ96PE3 977 aaPredicted RBP17.61■□□□□ 0.41
SF3A3-203ENST00000461869 ZNF215Q9UL58 517 aaPredicted RBP17.61■□□□□ 0.41
SF3A3-203ENST00000461869 V9GY48 417 aaPredicted RBP17.61■□□□□ 0.41
SF3A3-203ENST00000461869 FIBPO43427 364 aa17.6■□□□□ 0.41
SF3A3-203ENST00000461869 CYTH3O43739 400 aa17.6■□□□□ 0.41
SF3A3-203ENST00000461869 BAG4O95429 457 aaKnown RBP17.6■□□□□ 0.41
SF3A3-203ENST00000461869 FOSBP53539 338 aa17.6■□□□□ 0.41
SF3A3-203ENST00000461869 ARHGAP4P98171 946 aa17.6■□□□□ 0.41
SF3A3-203ENST00000461869 SEMA3FQ13275 785 aa17.6■□□□□ 0.41
SF3A3-203ENST00000461869 FAM26DQ5JW98 314 aa17.6■□□□□ 0.41
SF3A3-203ENST00000461869 UTP14CQ5TAP6 766 aaKnown RBP17.6■□□□□ 0.41
SF3A3-203ENST00000461869 MCTP1Q6DN14 999 aa17.6■□□□□ 0.41
SF3A3-203ENST00000461869 BRAPQ7Z569 592 aa17.6■□□□□ 0.41
SF3A3-203ENST00000461869 TRIM50Q86XT4 487 aa17.6■□□□□ 0.41
SF3A3-203ENST00000461869 FIBCD1Q8N539 461 aa17.6■□□□□ 0.41
SF3A3-203ENST00000461869 BRMS1Q9HCU9 246 aa17.6■□□□□ 0.41
SF3A3-203ENST00000461869 SH3GLB2Q9NR46 395 aa17.6■□□□□ 0.41
SF3A3-203ENST00000461869 CLDND1Q9NY35 253 aa17.6■□□□□ 0.41
SF3A3-203ENST00000461869 FRMPD4Q14CM0 1322 aa17.59■□□□□ 0.41
SF3A3-203ENST00000461869 DCXO43602 365 aa17.59■□□□□ 0.41
SF3A3-203ENST00000461869 CTNNB1P35222 781 aa17.59■□□□□ 0.41
SF3A3-203ENST00000461869 ADAM17P78536 824 aa17.59■□□□□ 0.41
SF3A3-203ENST00000461869 SP4Q02446 784 aa17.59■□□□□ 0.41
SF3A3-203ENST00000461869 RESTQ13127 1097 aa17.59■□□□□ 0.41
SF3A3-203ENST00000461869 GNL2Q13823 731 aaKnown RBP17.59■□□□□ 0.41
SF3A3-203ENST00000461869 COL19A1Q14993 1142 aa17.59■□□□□ 0.41
SF3A3-203ENST00000461869 NFKBIBQ15653 356 aa17.59■□□□□ 0.41
SF3A3-203ENST00000461869 PKN1Q16512 942 aa17.59■□□□□ 0.41
SF3A3-203ENST00000461869 ALYREFQ86V81 257 aaKnown RBP17.59■□□□□ 0.41
SF3A3-203ENST00000461869 CCDC148Q8NFR7 591 aa17.59■□□□□ 0.41
SF3A3-203ENST00000461869 CCDC12Q8WUD4 166 aaPredicted RBP17.59■□□□□ 0.41
SF3A3-203ENST00000461869 LMBR1Q8WVP7 490 aa17.59■□□□□ 0.41
SF3A3-203ENST00000461869 PRKAG3Q9UGI9 489 aa17.59■□□□□ 0.41
SF3A3-203ENST00000461869 TELO2Q9Y4R8 837 aa17.59■□□□□ 0.41
SF3A3-203ENST00000461869 COL4A6Q14031 1691 aa17.58■□□□□ 0.41
SF3A3-203ENST00000461869 POTEB3A0JP26 581 aa17.58■□□□□ 0.4
SF3A3-203ENST00000461869 NCK2O43639 380 aa17.58■□□□□ 0.4
SF3A3-203ENST00000461869 CHRNA1P02708 482 aa17.58■□□□□ 0.4
SF3A3-203ENST00000461869 MCM4P33991 863 aa17.58■□□□□ 0.4
SF3A3-203ENST00000461869 GUCY1B3Q02153 619 aa17.58■□□□□ 0.4
SF3A3-203ENST00000461869 ZP2Q05996 745 aa17.58■□□□□ 0.4
SF3A3-203ENST00000461869 ATL3Q6DD88 541 aa17.58■□□□□ 0.4
SF3A3-203ENST00000461869 POTEBQ6S5H4 581 aa17.58■□□□□ 0.4
SF3A3-203ENST00000461869 FERMT3Q86UX7 667 aa17.58■□□□□ 0.4
SF3A3-203ENST00000461869 PIBF1Q8WXW3 757 aa17.58■□□□□ 0.4
SF3A3-203ENST00000461869 AIFM3Q96NN9 605 aa17.58■□□□□ 0.4
SF3A3-203ENST00000461869 BRWD1Q9NSI6 2320 aa17.58■□□□□ 0.4
SF3A3-203ENST00000461869 NRCAMQ92823 1304 aa17.57■□□□□ 0.4
SF3A3-203ENST00000461869 C5orf67F2Z3F1 127 aa17.57■□□□□ 0.4
SF3A3-203ENST00000461869 MMP1P03956 469 aa17.57■□□□□ 0.4
SF3A3-203ENST00000461869 RB1P06400 928 aa17.57■□□□□ 0.4
SF3A3-203ENST00000461869 GHRP10912 638 aa17.57■□□□□ 0.4
SF3A3-203ENST00000461869 BMPR1AP36894 532 aa17.57■□□□□ 0.4
SF3A3-203ENST00000461869 KRT85P78386 507 aa17.57■□□□□ 0.4
SF3A3-203ENST00000461869 RPAINQ86UA6 219 aa17.57■□□□□ 0.4
SF3A3-203ENST00000461869 ADHFE1Q8IWW8 467 aa17.57■□□□□ 0.4
SF3A3-203ENST00000461869 SENP7Q9BQF6 1050 aa17.57■□□□□ 0.4
SF3A3-203ENST00000461869 C11orf84Q9BUA3 381 aaPredicted RBP17.57■□□□□ 0.4
SF3A3-203ENST00000461869 RWDD3Q9Y3V2 267 aa17.57■□□□□ 0.4
SF3A3-203ENST00000461869 MYH15Q9Y2K3 1946 aa17.57■□□□□ 0.4
SF3A3-203ENST00000461869 C19orf67A6NJJ6 358 aa17.56■□□□□ 0.4
SF3A3-203ENST00000461869 GRM6O15303 877 aa17.56■□□□□ 0.4
SF3A3-203ENST00000461869 LTBRP36941 435 aa17.56■□□□□ 0.4
SF3A3-203ENST00000461869 PCNX4Q63HM2 1172 aa17.56■□□□□ 0.4
SF3A3-203ENST00000461869 GALNT17Q6IS24 598 aa17.56■□□□□ 0.4
SF3A3-203ENST00000461869 PPP1R18Q6NYC8 613 aa17.56■□□□□ 0.4
SF3A3-203ENST00000461869 RUFY4Q6ZNE9 571 aa17.56■□□□□ 0.4
SF3A3-203ENST00000461869 NLRX1Q86UT6 975 aa17.56■□□□□ 0.4
SF3A3-203ENST00000461869 CUL5Q93034 780 aa17.56■□□□□ 0.4
SF3A3-203ENST00000461869 ZNF396Q96N95 335 aaPredicted RBP17.56■□□□□ 0.4
SF3A3-203ENST00000461869 LMAN2LQ9H0V9 348 aa17.56■□□□□ 0.4
SF3A3-203ENST00000461869 ADGRA3Q8IWK6 1321 aa17.55■□□□□ 0.4
SF3A3-203ENST00000461869 ENPP3O14638 875 aa17.55■□□□□ 0.4
SF3A3-203ENST00000461869 HYAL1Q12794 435 aa17.55■□□□□ 0.4
SF3A3-203ENST00000461869 CTC1Q2NKJ3 1217 aa17.55■□□□□ 0.4
SF3A3-203ENST00000461869 TAF2Q6P1X5 1199 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms