RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 SLC5A5Q92911 643 aa18.24■□□□□ 0.51
COL7A1-203ENST00000459756 GAS2L1Q99501 681 aaPredicted RBP18.24■□□□□ 0.51
COL7A1-203ENST00000459756 MAFBQ9Y5Q3 323 aaPredicted RBP18.24■□□□□ 0.51
COL7A1-203ENST00000459756 COL1A2P08123 1366 aa18.24■□□□□ 0.51
COL7A1-203ENST00000459756 MICAL3Q7RTP6 2002 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 A0A0C4DFX4 3053 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 PRUNE2Q8WUY3 3088 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 MYH9P35579 1960 aaKnown RBP18.23■□□□□ 0.51
COL7A1-203ENST00000459756 CCDC194A0A1B0GVG4 234 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 GAS7O60861 476 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 GJB5O95377 273 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 AMHP03971 560 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 MRPS6P82932 125 aaKnown RBP18.23■□□□□ 0.51
COL7A1-203ENST00000459756 MGAT3Q09327 533 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 ZNF484Q5JVG2 852 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 LRCH2Q5VUJ6 765 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 IER5Q5VY09 327 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 TRAPPC12Q8WVT3 735 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 MBOAT7Q96N66 472 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 IFIH1Q9BYX4 1025 aaKnown RBP18.23■□□□□ 0.51
COL7A1-203ENST00000459756 OSBPL7Q9BZF2 842 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 FAM49AQ9H0Q0 323 aaPredicted RBP18.23■□□□□ 0.51
COL7A1-203ENST00000459756 SAMM50Q9Y512 469 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 UNC80Q8N2C7 3258 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 MYO9BQ13459 2157 aa18.23■□□□□ 0.51
COL7A1-203ENST00000459756 SMIM35A0A1B0GVV1 85 aa18.22■□□□□ 0.51
COL7A1-203ENST00000459756 TDP2O95551 362 aa18.22■□□□□ 0.51
COL7A1-203ENST00000459756 FDPSP14324 419 aaKnown RBP18.22■□□□□ 0.51
COL7A1-203ENST00000459756 SFNP31947 248 aa18.22■□□□□ 0.51
COL7A1-203ENST00000459756 INF2Q27J81 1249 aa18.22■□□□□ 0.51
COL7A1-203ENST00000459756 MTHFD1LQ6UB35 978 aa18.22■□□□□ 0.51
COL7A1-203ENST00000459756 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.22■□□□□ 0.51
COL7A1-203ENST00000459756 TMCO2Q7Z6W1 182 aaPredicted RBP18.22■□□□□ 0.51
COL7A1-203ENST00000459756 CKAP2LQ8IYA6 745 aa18.22■□□□□ 0.51
COL7A1-203ENST00000459756 NME8Q8N427 588 aa18.22■□□□□ 0.51
COL7A1-203ENST00000459756 BBXQ8WY36 941 aaPredicted RBP18.22■□□□□ 0.51
COL7A1-203ENST00000459756 ZBTB10Q96DT7 871 aa18.22■□□□□ 0.51
COL7A1-203ENST00000459756 RAD9AQ99638 391 aa18.22■□□□□ 0.51
COL7A1-203ENST00000459756 TEKT3Q9BXF9 490 aa18.22■□□□□ 0.51
COL7A1-203ENST00000459756 DISC1Q9NRI5 854 aa18.22■□□□□ 0.51
COL7A1-203ENST00000459756 TRANK1O15050 2925 aa18.22■□□□□ 0.51
COL7A1-203ENST00000459756 SIP14410 1827 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 M0QZ92 97 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 GHRP10912 638 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 ATP4AP20648 1035 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 KLRC1P26715 233 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 JAK3P52333 1124 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 TAP1Q03518 808 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 LPIN1Q14693 890 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 NSUN7Q8NE18 718 aaKnown RBP18.21■□□□□ 0.51
COL7A1-203ENST00000459756 RDM1Q8NG50 284 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 FAM167AQ96KS9 214 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 GJB4Q9NTQ9 266 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 GABBR1Q9UBS5 961 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 DDX25Q9UHL0 483 aaKnown RBP18.21■□□□□ 0.51
COL7A1-203ENST00000459756 LIMCH1Q9UPQ0 1083 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 CDY2AQ9Y6F7 541 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 IGSF9BQ9UPX0 1349 aa18.21■□□□□ 0.51
COL7A1-203ENST00000459756 ZBTB42B2RXF5 422 aa18.2■□□□□ 0.5
COL7A1-203ENST00000459756 DTNBO60941 627 aa18.2■□□□□ 0.5
COL7A1-203ENST00000459756 PSMD10O75832 226 aa18.2■□□□□ 0.5
COL7A1-203ENST00000459756 GCFC2P16383 781 aaKnown RBP18.2■□□□□ 0.5
COL7A1-203ENST00000459756 LETM2Q2VYF4 491 aa18.2■□□□□ 0.5
COL7A1-203ENST00000459756 FBXO47Q5MNV8 452 aa18.2■□□□□ 0.5
COL7A1-203ENST00000459756 NEK8Q86SG6 692 aa18.2■□□□□ 0.5
COL7A1-203ENST00000459756 MYOCDQ8IZQ8 938 aa18.2■□□□□ 0.5
COL7A1-203ENST00000459756 USP38Q8NB14 1042 aa18.2■□□□□ 0.5
COL7A1-203ENST00000459756 ETNPPLQ8TBG4 499 aa18.2■□□□□ 0.5
COL7A1-203ENST00000459756 OXER1Q8TDS5 423 aa18.2■□□□□ 0.5
COL7A1-203ENST00000459756 NAP1L4Q99733 375 aaKnown RBP18.2■□□□□ 0.5
COL7A1-203ENST00000459756 BRMS1Q9HCU9 246 aa18.2■□□□□ 0.5
COL7A1-203ENST00000459756 CEP131Q9UPN4 1083 aa18.2■□□□□ 0.5
COL7A1-203ENST00000459756 SQORQ9Y6N5 450 aa18.2■□□□□ 0.5
COL7A1-203ENST00000459756 WDR81Q562E7 1941 aa18.19■□□□□ 0.5
COL7A1-203ENST00000459756 CHMP2AO43633 222 aa18.19■□□□□ 0.5
COL7A1-203ENST00000459756 KRT2P35908 639 aa18.19■□□□□ 0.5
COL7A1-203ENST00000459756 ADGRE1Q14246 886 aa18.19■□□□□ 0.5
COL7A1-203ENST00000459756 PPP4R3AQ6IN85 833 aa18.19■□□□□ 0.5
COL7A1-203ENST00000459756 TSHZ1Q6ZSZ6 1077 aa18.19■□□□□ 0.5
COL7A1-203ENST00000459756 PIK3AP1Q6ZUJ8 805 aa18.19■□□□□ 0.5
COL7A1-203ENST00000459756 GJA10Q969M2 543 aa18.19■□□□□ 0.5
COL7A1-203ENST00000459756 UNC45AQ9H3U1 944 aa18.19■□□□□ 0.5
COL7A1-203ENST00000459756 INSL6Q9Y581 213 aa18.19■□□□□ 0.5
COL7A1-203ENST00000459756 TRPV2Q9Y5S1 764 aa18.19■□□□□ 0.5
COL7A1-203ENST00000459756 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.18■□□□□ 0.5
COL7A1-203ENST00000459756 LCHNA4D1U4 455 aa18.18■□□□□ 0.5
COL7A1-203ENST00000459756 RBAK-RBAKDNI3L0D1 243 aa18.18■□□□□ 0.5
COL7A1-203ENST00000459756 JAK2O60674 1132 aa18.18■□□□□ 0.5
COL7A1-203ENST00000459756 ARHGEF15O94989 841 aa18.18■□□□□ 0.5
COL7A1-203ENST00000459756 IGFBP4P22692 258 aa18.18■□□□□ 0.5
COL7A1-203ENST00000459756 TMEM62Q0P6H9 643 aa18.18■□□□□ 0.5
COL7A1-203ENST00000459756 TRIM29Q14134 588 aa18.18■□□□□ 0.5
COL7A1-203ENST00000459756 FAM117BQ6P1L5 589 aa18.18■□□□□ 0.5
COL7A1-203ENST00000459756 B3GNT9Q6UX72 402 aa18.18■□□□□ 0.5
COL7A1-203ENST00000459756 MIER3Q7Z3K6 550 aa18.18■□□□□ 0.5
COL7A1-203ENST00000459756 KIAA0319LQ8IZA0 1049 aa18.18■□□□□ 0.5
COL7A1-203ENST00000459756 TOP1MTQ969P6 601 aa18.18■□□□□ 0.5
COL7A1-203ENST00000459756 KIF2CQ99661 725 aa18.18■□□□□ 0.5
COL7A1-203ENST00000459756 CELF4Q9BZC1 486 aaKnown RBP18.18■□□□□ 0.5
COL7A1-203ENST00000459756 NRBP2Q9NSY0 501 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms