RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 PCDHA2Q9Y5H9 948 aa18.19■□□□□ 0.5
CD28-203ENST00000458610 DOCK5Q9H7D0 1870 aa18.18■□□□□ 0.5
CD28-203ENST00000458610 FAM205CA6NFA0 338 aa18.18■□□□□ 0.5
CD28-203ENST00000458610 NEMFO60524 1076 aa18.18■□□□□ 0.5
CD28-203ENST00000458610 ATP2B1P20020 1258 aa18.18■□□□□ 0.5
CD28-203ENST00000458610 U2AF2P26368 475 aaKnown RBP eCLIP18.18■□□□□ 0.5
CD28-203ENST00000458610 SMAD3P84022 425 aaKnown RBP18.18■□□□□ 0.5
CD28-203ENST00000458610 IER5Q5VY09 327 aa18.18■□□□□ 0.5
CD28-203ENST00000458610 B3GNT9Q6UX72 402 aa18.18■□□□□ 0.5
CD28-203ENST00000458610 PCDHA12Q9UN75 941 aa18.18■□□□□ 0.5
CD28-203ENST00000458610 SMIM35A0A1B0GVV1 85 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 M0QZ92 97 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 MAGEB2O15479 319 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 EFCAB14O75071 495 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 BAIAP3O94812 1187 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 CXCL10P02778 98 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 PDCP20941 246 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 KLRC1P26715 233 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 PSMC5P62195 406 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 CUL4AQ13619 759 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 FAM26DQ5JW98 314 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 MARCH8Q5T0T0 291 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 RASIP1Q5U651 963 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 LARP1BQ659C4 914 aaKnown RBP18.17■□□□□ 0.5
CD28-203ENST00000458610 MTHFD1LQ6UB35 978 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 OTOP2Q7RTS6 562 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 POTEDQ86YR6 584 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 HAS1Q92839 578 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 GJA10Q969M2 543 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 SLC4A7Q9Y6M7 1214 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 IGSF9BQ9UPX0 1349 aa18.17■□□□□ 0.5
CD28-203ENST00000458610 TRIOBPQ9H2D6 2365 aa18.16■□□□□ 0.5
CD28-203ENST00000458610 ZBBXA8MT70 800 aa18.16■□□□□ 0.5
CD28-203ENST00000458610 OATP04181 439 aa18.16■□□□□ 0.5
CD28-203ENST00000458610 IKBKEQ14164 716 aa18.16■□□□□ 0.5
CD28-203ENST00000458610 EPHA7Q15375 998 aa18.16■□□□□ 0.5
CD28-203ENST00000458610 XKR3Q5GH77 459 aa18.16■□□□□ 0.5
CD28-203ENST00000458610 MCTP1Q6DN14 999 aa18.16■□□□□ 0.5
CD28-203ENST00000458610 CNKSR3Q6P9H4 555 aa18.16■□□□□ 0.5
CD28-203ENST00000458610 ZNF710Q8N1W2 664 aa18.16■□□□□ 0.5
CD28-203ENST00000458610 WNT8BQ93098 351 aa18.16■□□□□ 0.5
CD28-203ENST00000458610 VAV3Q9UKW4 847 aa18.16■□□□□ 0.5
CD28-203ENST00000458610 ABHD14A-ACY1A0A1B0GW23 586 aa18.15■□□□□ 0.5
CD28-203ENST00000458610 P4HBP07237 508 aaKnown RBP18.15■□□□□ 0.5
CD28-203ENST00000458610 ATP4AP20648 1035 aa18.15■□□□□ 0.5
CD28-203ENST00000458610 TMOD1P28289 359 aa18.15■□□□□ 0.5
CD28-203ENST00000458610 MCM7P33993 719 aa18.15■□□□□ 0.5
CD28-203ENST00000458610 TXKP42681 527 aa18.15■□□□□ 0.5
CD28-203ENST00000458610 QARSP47897 775 aaKnown RBP18.15■□□□□ 0.5
CD28-203ENST00000458610 TRAF7Q6Q0C0 670 aa18.15■□□□□ 0.5
CD28-203ENST00000458610 FAM43BQ6ZT52 329 aaPredicted RBP18.15■□□□□ 0.5
CD28-203ENST00000458610 PHOSPHO2Q8TCD6 241 aa18.15■□□□□ 0.5
CD28-203ENST00000458610 DNAJB3Q8WWF6 145 aa18.15■□□□□ 0.5
CD28-203ENST00000458610 SEPT8Q92599 483 aa18.15■□□□□ 0.5
CD28-203ENST00000458610 SNX21Q969T3 373 aa18.15■□□□□ 0.5
CD28-203ENST00000458610 INTS4Q96HW7 963 aaKnown RBP18.15■□□□□ 0.5
CD28-203ENST00000458610 TTC12Q9H892 705 aaPredicted RBP18.15■□□□□ 0.5
CD28-203ENST00000458610 K7ELQ4 463 aaPredicted RBP18.14■□□□□ 0.49
CD28-203ENST00000458610 NBNO60934 754 aa18.14■□□□□ 0.49
CD28-203ENST00000458610 KCNJ6P48051 423 aa18.14■□□□□ 0.49
CD28-203ENST00000458610 MRPS6P82932 125 aaKnown RBP18.14■□□□□ 0.49
CD28-203ENST00000458610 PRKCEQ02156 737 aa18.14■□□□□ 0.49
CD28-203ENST00000458610 ZNF174Q15697 407 aa18.14■□□□□ 0.49
CD28-203ENST00000458610 TTC38Q5R3I4 469 aa18.14■□□□□ 0.49
CD28-203ENST00000458610 NCAPH2Q6IBW4 605 aa18.14■□□□□ 0.49
CD28-203ENST00000458610 RUFY4Q6ZNE9 571 aa18.14■□□□□ 0.49
CD28-203ENST00000458610 TRMT1LQ7Z2T5 733 aaKnown RBP18.14■□□□□ 0.49
CD28-203ENST00000458610 EXOC8Q8IYI6 725 aa18.14■□□□□ 0.49
CD28-203ENST00000458610 USP38Q8NB14 1042 aa18.14■□□□□ 0.49
CD28-203ENST00000458610 TRAPPC12Q8WVT3 735 aa18.14■□□□□ 0.49
CD28-203ENST00000458610 MTMR9Q96QG7 549 aa18.14■□□□□ 0.49
CD28-203ENST00000458610 NIFKQ9BYG3 293 aaKnown RBP18.14■□□□□ 0.49
CD28-203ENST00000458610 FAM49AQ9H0Q0 323 aaPredicted RBP18.14■□□□□ 0.49
CD28-203ENST00000458610 SQORQ9Y6N5 450 aa18.14■□□□□ 0.49
CD28-203ENST00000458610 KAT6AQ92794 2004 aa18.14■□□□□ 0.49
CD28-203ENST00000458610 DDX11L8A8MPP1 907 aa18.13■□□□□ 0.49
CD28-203ENST00000458610 SOX1O00570 391 aaPredicted RBP18.13■□□□□ 0.49
CD28-203ENST00000458610 ZNF862O60290 1169 aa18.13■□□□□ 0.49
CD28-203ENST00000458610 CTSHP09668 335 aa18.13■□□□□ 0.49
CD28-203ENST00000458610 RILPL1Q5EBL4 403 aa18.13■□□□□ 0.49
CD28-203ENST00000458610 FAM109BQ6ICB4 259 aaPredicted RBP18.13■□□□□ 0.49
CD28-203ENST00000458610 OTUD6AQ7L8S5 288 aa18.13■□□□□ 0.49
CD28-203ENST00000458610 NEK9Q8TD19 979 aa18.13■□□□□ 0.49
CD28-203ENST00000458610 APBB2Q92870 758 aa18.13■□□□□ 0.49
CD28-203ENST00000458610 LRCH3Q96II8 777 aa18.13■□□□□ 0.49
CD28-203ENST00000458610 SLC9A7Q96T83 725 aa18.13■□□□□ 0.49
CD28-203ENST00000458610 JPH2Q9BR39 696 aaPredicted RBP18.13■□□□□ 0.49
CD28-203ENST00000458610 ZSWIM4Q9H7M6 989 aa18.13■□□□□ 0.49
CD28-203ENST00000458610 PPME1Q9Y570 386 aa18.13■□□□□ 0.49
CD28-203ENST00000458610 KIF28PB7ZC32 967 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 EML1O00423 815 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 CHRNA1P02708 482 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 OR52Z1P0C646 297 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 CDC42EP1Q00587 391 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 TBC1D8BQ0IIM8 1120 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 GPNMBQ14956 572 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 RAB30Q15771 203 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 TMEM266Q2M3C6 531 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 PLEKHG4Q58EX7 1191 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 ODR4Q5SWX8 454 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms