RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.75□□□□□ -0.21
CNOT3-205ENST00000457463 PCDHA12Q9UN75 941 aa13.75□□□□□ -0.21
CNOT3-205ENST00000457463 TRIP12Q14669 1992 aaPredicted RBP13.74□□□□□ -0.21
CNOT3-205ENST00000457463 OR52Z1P0C646 297 aa13.74□□□□□ -0.21
CNOT3-205ENST00000457463 IQCF3P0C7M6 154 aa13.74□□□□□ -0.21
CNOT3-205ENST00000457463 CKBP12277 381 aa13.74□□□□□ -0.21
CNOT3-205ENST00000457463 TECP42680 631 aa13.74□□□□□ -0.21
CNOT3-205ENST00000457463 PRKCEQ02156 737 aa13.74□□□□□ -0.21
CNOT3-205ENST00000457463 FPGSQ05932 587 aa13.74□□□□□ -0.21
CNOT3-205ENST00000457463 RESTQ13127 1097 aa13.74□□□□□ -0.21
CNOT3-205ENST00000457463 PTGDRQ13258 359 aa13.74□□□□□ -0.21
CNOT3-205ENST00000457463 PKP1Q13835 747 aa13.74□□□□□ -0.21
CNOT3-205ENST00000457463 CTTNQ14247 550 aaKnown RBP13.74□□□□□ -0.21
CNOT3-205ENST00000457463 MBTPS1Q14703 1052 aa13.74□□□□□ -0.21
CNOT3-205ENST00000457463 ZNF618Q5T7W0 954 aa13.74□□□□□ -0.21
CNOT3-205ENST00000457463 CKAP2LQ8IYA6 745 aa13.74□□□□□ -0.21
CNOT3-205ENST00000457463 RDM1Q8NG50 284 aa13.74□□□□□ -0.21
CNOT3-205ENST00000457463 DYDC2Q96IM9 177 aa13.74□□□□□ -0.21
CNOT3-205ENST00000457463 FTOQ9C0B1 505 aaKnown RBP eCLIP13.74□□□□□ -0.21
CNOT3-205ENST00000457463 A0A087WWV3 80 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 MBLAC1A4D2B0 266 aaPredicted RBP13.73□□□□□ -0.21
CNOT3-205ENST00000457463 ZBTB39O15060 712 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 STX6O43752 255 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 HBP1O60381 514 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 SLITRK3O94933 977 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 OATP04181 439 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 CTSHP09668 335 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 PDCP20941 246 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 BMP8BP34820 402 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 THPOP40225 353 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 SLC26A2P50443 739 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 CYP4A11Q02928 519 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 EPHA7Q15375 998 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 SHHQ15465 462 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 RILPL1Q5EBL4 403 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 FOXD4L5Q5VV16 416 aaPredicted RBP13.73□□□□□ -0.21
CNOT3-205ENST00000457463 MTHFD1LQ6UB35 978 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 DEFB128Q7Z7B8 93 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 DNAJB3Q8WWF6 145 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 FOXD4L4Q8WXT5 416 aaPredicted RBP13.73□□□□□ -0.21
CNOT3-205ENST00000457463 BBXQ8WY36 941 aaPredicted RBP13.73□□□□□ -0.21
CNOT3-205ENST00000457463 TUBE1Q9UJT0 475 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 LAMA3Q16787 3333 aa13.73□□□□□ -0.21
CNOT3-205ENST00000457463 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 NBNO60934 754 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 HSP90AA1P07900 732 aaKnown RBP13.72□□□□□ -0.21
CNOT3-205ENST00000457463 GNAT1P11488 350 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 SELPP16109 830 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 KLRC1P26715 233 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 RBL2Q08999 1139 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 TMEM62Q0P6H9 643 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 BFSP2Q13515 415 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 TCTN1Q2MV58 587 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 PLA2G4FQ68DD2 849 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 ANO5Q75V66 913 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 LRRC8DQ7L1W4 858 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 TMEM199Q8N511 208 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 ZNF579Q8NAF0 562 aaKnown RBP13.72□□□□□ -0.21
CNOT3-205ENST00000457463 RETREG2Q8NC44 543 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 CAGE1Q8TC20 777 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 HSD17B14Q9BPX1 270 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 EIF2AK1Q9BQI3 630 aaKnown RBP13.72□□□□□ -0.21
CNOT3-205ENST00000457463 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.72□□□□□ -0.216e-9■■□□□ 13.1
CNOT3-205ENST00000457463 LXNQ9BS40 222 aa13.72□□□□□ -0.21
CNOT3-205ENST00000457463 FAM49AQ9H0Q0 323 aaPredicted RBP13.72□□□□□ -0.21
CNOT3-205ENST00000457463 SEPT9Q9UHD8 586 aaPredicted RBP13.72□□□□□ -0.21
CNOT3-205ENST00000457463 RRN3P2A6NIE6 340 aa13.71□□□□□ -0.21
CNOT3-205ENST00000457463 PP2D1A8MPX8 630 aa13.71□□□□□ -0.21
CNOT3-205ENST00000457463 C22orf31O95567 290 aa13.71□□□□□ -0.21
CNOT3-205ENST00000457463 P4HBP07237 508 aaKnown RBP13.71□□□□□ -0.21
CNOT3-205ENST00000457463 QARSP47897 775 aaKnown RBP13.71□□□□□ -0.21
CNOT3-205ENST00000457463 PSMC5P62195 406 aa13.71□□□□□ -0.21
CNOT3-205ENST00000457463 ORC2Q13416 577 aaPredicted RBP13.71□□□□□ -0.21
CNOT3-205ENST00000457463 TARBP2Q15633 366 aaKnown RBP13.71□□□□□ -0.21
CNOT3-205ENST00000457463 MTERF2Q49AM1 385 aa13.71□□□□□ -0.21
CNOT3-205ENST00000457463 ZNF484Q5JVG2 852 aa13.71□□□□□ -0.21
CNOT3-205ENST00000457463 TMEM240Q5SV17 173 aa13.71□□□□□ -0.21
CNOT3-205ENST00000457463 ZNF365Q70YC5 407 aa13.71□□□□□ -0.21
CNOT3-205ENST00000457463 TPH2Q8IWU9 490 aa13.71□□□□□ -0.21
CNOT3-205ENST00000457463 CEP89Q96ST8 783 aa13.71□□□□□ -0.21
CNOT3-205ENST00000457463 IL23AQ9NPF7 189 aa13.71□□□□□ -0.21
CNOT3-205ENST00000457463 SCN5AQ14524 2016 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 DDX11L8A8MPP1 907 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 MED24O75448 989 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 CHRNA1P02708 482 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 SPATA31C1P0DKV0 1188 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 CDC25AP30304 524 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 NPEPPSP55786 919 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 ATP2C1P98194 919 aaPredicted RBP13.7□□□□□ -0.22
CNOT3-205ENST00000457463 MGAT3Q09327 533 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 PPIGQ13427 754 aaKnown RBP eCLIP13.7□□□□□ -0.227e-6■■□□□ 12.3
CNOT3-205ENST00000457463 DRP2Q13474 957 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 ECM1Q16610 540 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 XKR3Q5GH77 459 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 BRAPQ7Z569 592 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 TDHQ8IZJ6 230 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 FAM167AQ96KS9 214 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 PPP1R16BQ96T49 567 aa13.7□□□□□ -0.22
CNOT3-205ENST00000457463 NIFKQ9BYG3 293 aaKnown RBP13.7□□□□□ -0.22
CNOT3-205ENST00000457463 NRBP2Q9NSY0 501 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms