RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 CLIC6Q96NY7 704 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 CSRNP2Q9H175 543 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 WRAP73Q9P2S5 460 aaPredicted RBP20.03■□□□□ 0.8
FAM239A-203ENST00000456563 HDAC6Q9UBN7 1215 aa20.03■□□□□ 0.8
FAM239A-203ENST00000456563 SLC26A4O43511 780 aa20.02■□□□□ 0.8
FAM239A-203ENST00000456563 CUTAO60888 179 aa20.02■□□□□ 0.8
FAM239A-203ENST00000456563 MED24O75448 989 aa20.02■□□□□ 0.8
FAM239A-203ENST00000456563 OATP04181 439 aa20.02■□□□□ 0.8
FAM239A-203ENST00000456563 SMIM10L2AP0DMW4 78 aa20.02■□□□□ 0.8
FAM239A-203ENST00000456563 SMIM10L2BP0DMW5 78 aa20.02■□□□□ 0.8
FAM239A-203ENST00000456563 CDC25AP30304 524 aa20.02■□□□□ 0.8
FAM239A-203ENST00000456563 HOXC8P31273 242 aa20.02■□□□□ 0.8
FAM239A-203ENST00000456563 ATN1P54259 1190 aaPredicted RBP20.02■□□□□ 0.8
FAM239A-203ENST00000456563 XKR3Q5GH77 459 aa20.02■□□□□ 0.8
FAM239A-203ENST00000456563 ZNF579Q8NAF0 562 aaKnown RBP20.02■□□□□ 0.8
FAM239A-203ENST00000456563 SNX29Q8TEQ0 813 aa20.02■□□□□ 0.8
FAM239A-203ENST00000456563 MMTAG2Q9BU76 263 aaKnown RBP20.02■□□□□ 0.8
FAM239A-203ENST00000456563 NRBP2Q9NSY0 501 aa20.02■□□□□ 0.8
FAM239A-203ENST00000456563 GTF2IRD1Q9UHL9 959 aa20.02■□□□□ 0.8
FAM239A-203ENST00000456563 TRPC6Q9Y210 931 aa20.02■□□□□ 0.8
FAM239A-203ENST00000456563 MROH7Q68CQ1 1323 aa20.02■□□□□ 0.79
FAM239A-203ENST00000456563 CCT6AP40227 531 aaKnown RBP20.01■□□□□ 0.79
FAM239A-203ENST00000456563 LRRC26Q2I0M4 334 aa20.01■□□□□ 0.79
FAM239A-203ENST00000456563 FAM47CQ5HY64 1035 aa20.01■□□□□ 0.79
FAM239A-203ENST00000456563 HYIQ5T013 277 aa20.01■□□□□ 0.79
FAM239A-203ENST00000456563 AXDND1Q5T1B0 1012 aaPredicted RBP20.01■□□□□ 0.79
FAM239A-203ENST00000456563 ANKRD33Q7Z3H0 272 aa20.01■□□□□ 0.79
FAM239A-203ENST00000456563 PPP1R13LQ8WUF5 828 aa20.01■□□□□ 0.79
FAM239A-203ENST00000456563 NIFKQ9BYG3 293 aaKnown RBP20.01■□□□□ 0.79
FAM239A-203ENST00000456563 CCSER1Q9C0I3 900 aa20.01■□□□□ 0.79
FAM239A-203ENST00000456563 PCDHA7Q9UN72 937 aa20.01■□□□□ 0.79
FAM239A-203ENST00000456563 NRCAMQ92823 1304 aa20.01■□□□□ 0.79
FAM239A-203ENST00000456563 RRN3P2A6NIE6 340 aa20■□□□□ 0.79
FAM239A-203ENST00000456563 XRCC6P12956 609 aaKnown RBP eCLIP20■□□□□ 0.79
FAM239A-203ENST00000456563 INSRRP14616 1297 aa20■□□□□ 0.79
FAM239A-203ENST00000456563 UBA7P41226 1012 aa20■□□□□ 0.79
FAM239A-203ENST00000456563 ME1P48163 572 aa20■□□□□ 0.79
FAM239A-203ENST00000456563 ADAM17P78536 824 aa20■□□□□ 0.79
FAM239A-203ENST00000456563 PPFIA1Q13136 1202 aa20■□□□□ 0.79
FAM239A-203ENST00000456563 ZNF484Q5JVG2 852 aa20■□□□□ 0.79
FAM239A-203ENST00000456563 CABP7Q86V35 215 aa20■□□□□ 0.79
FAM239A-203ENST00000456563 KCTD17Q8N5Z5 321 aa20■□□□□ 0.79
FAM239A-203ENST00000456563 TOX2Q96NM4 488 aa20■□□□□ 0.79
FAM239A-203ENST00000456563 KDM3AQ9Y4C1 1321 aa20■□□□□ 0.79
FAM239A-203ENST00000456563 COL1A2P08123 1366 aa19.99■□□□□ 0.79
FAM239A-203ENST00000456563 C17orf102A2RUQ5 167 aa19.99■□□□□ 0.79
FAM239A-203ENST00000456563 DDX11L8A8MPP1 907 aa19.99■□□□□ 0.79
FAM239A-203ENST00000456563 GNAT1P11488 350 aa19.99■□□□□ 0.79
FAM239A-203ENST00000456563 YWHABP31946 246 aaKnown RBP19.99■□□□□ 0.79
FAM239A-203ENST00000456563 RTP1P59025 263 aa19.99■□□□□ 0.79
FAM239A-203ENST00000456563 HIC1Q14526 733 aa19.99■□□□□ 0.79
FAM239A-203ENST00000456563 GRIK4Q16099 956 aa19.99■□□□□ 0.79
FAM239A-203ENST00000456563 ECM1Q16610 540 aa19.99■□□□□ 0.79
FAM239A-203ENST00000456563 TRIM60Q495X7 471 aa19.99■□□□□ 0.79
FAM239A-203ENST00000456563 SPECC1Q5M775 1068 aa19.99■□□□□ 0.79
FAM239A-203ENST00000456563 GDF6Q6KF10 455 aaPredicted RBP19.99■□□□□ 0.79
FAM239A-203ENST00000456563 ANO5Q75V66 913 aa19.99■□□□□ 0.79
FAM239A-203ENST00000456563 TRMT1LQ7Z2T5 733 aaKnown RBP19.99■□□□□ 0.79
FAM239A-203ENST00000456563 FAM126BQ8IXS8 530 aa19.99■□□□□ 0.79
FAM239A-203ENST00000456563 HTATIP2Q9BUP3 242 aa19.99■□□□□ 0.79
FAM239A-203ENST00000456563 SETD4Q9NVD3 440 aa19.99■□□□□ 0.79
FAM239A-203ENST00000456563 MYH9P35579 1960 aaKnown RBP19.98■□□□□ 0.79
FAM239A-203ENST00000456563 ZBTB42B2RXF5 422 aa19.98■□□□□ 0.79
FAM239A-203ENST00000456563 CD4P01730 458 aa19.98■□□□□ 0.79
FAM239A-203ENST00000456563 TARBP2Q15633 366 aaKnown RBP19.98■□□□□ 0.79
FAM239A-203ENST00000456563 POTEGQ6S5H5 508 aa19.98■□□□□ 0.79
FAM239A-203ENST00000456563 USP49Q70CQ1 688 aa19.98■□□□□ 0.79
FAM239A-203ENST00000456563 OTUD6AQ7L8S5 288 aa19.98■□□□□ 0.79
FAM239A-203ENST00000456563 LMBR1Q8WVP7 490 aa19.98■□□□□ 0.79
FAM239A-203ENST00000456563 SYMPKQ92797 1274 aaKnown RBP19.98■□□□□ 0.79
FAM239A-203ENST00000456563 EPSTI1Q96J88 318 aa19.98■□□□□ 0.79
FAM239A-203ENST00000456563 NACC1Q96RE7 527 aa19.98■□□□□ 0.79
FAM239A-203ENST00000456563 NT5C3AQ9H0P0 336 aa19.98■□□□□ 0.79
FAM239A-203ENST00000456563 GDPD2Q9HCC8 539 aa19.98■□□□□ 0.79
FAM239A-203ENST00000456563 ANKEF1Q9NU02 776 aa19.98■□□□□ 0.79
FAM239A-203ENST00000456563 SEPT9Q9UHD8 586 aaPredicted RBP19.98■□□□□ 0.79
FAM239A-203ENST00000456563 KIAA1024Q9UPX6 916 aa19.98■□□□□ 0.79
FAM239A-203ENST00000456563 WDR81Q562E7 1941 aa19.98■□□□□ 0.79
FAM239A-203ENST00000456563 MBLAC1A4D2B0 266 aaPredicted RBP19.97■□□□□ 0.79
FAM239A-203ENST00000456563 DCDC2CA8MYV0 355 aa19.97■□□□□ 0.79
FAM239A-203ENST00000456563 TLR3O15455 904 aaKnown RBP19.97■□□□□ 0.79
FAM239A-203ENST00000456563 B4GALT4O60513 344 aa19.97■□□□□ 0.79
FAM239A-203ENST00000456563 RGS19P49795 217 aa19.97■□□□□ 0.79
FAM239A-203ENST00000456563 TLE2Q04725 743 aa19.97■□□□□ 0.79
FAM239A-203ENST00000456563 GRB10Q13322 594 aa19.97■□□□□ 0.79
FAM239A-203ENST00000456563 TMEM119Q4V9L6 283 aa19.97■□□□□ 0.79
FAM239A-203ENST00000456563 MARCH8Q5T0T0 291 aa19.97■□□□□ 0.79
FAM239A-203ENST00000456563 ADALQ6DHV7 355 aa19.97■□□□□ 0.79
FAM239A-203ENST00000456563 SHC4Q6S5L8 630 aa19.97■□□□□ 0.79
FAM239A-203ENST00000456563 CALML4Q96GE6 196 aa19.97■□□□□ 0.79
FAM239A-203ENST00000456563 PNMA5Q96PV4 448 aa19.97■□□□□ 0.79
FAM239A-203ENST00000456563 CEP89Q96ST8 783 aa19.97■□□□□ 0.79
FAM239A-203ENST00000456563 DDX19AQ9NUU7 478 aaKnown RBP19.97■□□□□ 0.79
FAM239A-203ENST00000456563 ATP11BQ9Y2G3 1177 aa19.97■□□□□ 0.79
FAM239A-203ENST00000456563 PPME1Q9Y570 386 aa19.97■□□□□ 0.79
FAM239A-203ENST00000456563 TMEM150BA6NC51 233 aa19.96■□□□□ 0.79
FAM239A-203ENST00000456563 ZBTB39O15060 712 aa19.96■□□□□ 0.79
FAM239A-203ENST00000456563 PQBP1O60828 265 aaKnown RBP19.96■□□□□ 0.79
FAM239A-203ENST00000456563 TXLNAP40222 546 aa19.96■□□□□ 0.79
FAM239A-203ENST00000456563 IGBP1P78318 339 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms