RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 TPP1O14773 563 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 SLC27A2O14975 620 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 BUB1BO60566 1050 aaPredicted RBP5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 NDUFS2O75306 463 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 TADA3O75528 432 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 DGKIO75912 1065 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 EFEMP2O95967 443 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 SDHAP31040 664 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 CYP27A1Q02318 531 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 KIR3DS1Q14943 382 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 ZBTB41Q5SVQ8 909 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 DUSP27Q5VZP5 1158 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 CD163Q86VB7 1156 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 FAM9AQ8IZU1 332 aaPredicted RBP5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 CLEC4DQ8WXI8 215 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 GJA10Q969M2 543 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 TTC17Q96AE7 1141 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 FOXRED1Q96CU9 486 aaPredicted RBP5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 ACAP3Q96P50 834 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 MAF1Q9H063 256 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 RNF38Q9H0F5 515 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 KLHL11Q9NVR0 708 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 BSDC1Q9NW68 430 aaPredicted RBP5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 EDARQ9UNE0 448 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 PPP2R3BQ9Y5P8 575 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 ATP23Q9Y6H3 246 aa5.34□□□□□ -1.55
HMGN3P1-201ENST00000453847 NOTOA8MTQ0 251 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 ACOT7O00154 380 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 OFD1O75665 1012 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 HRGP04196 525 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 PDCP20941 246 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 ENDOUP21128 410 aaKnown RBP5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 EDNRBP24530 442 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 THBS2P35442 1172 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 MVKQ03426 396 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 EMC4Q5J8M3 183 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 PRR23CQ6ZRP0 262 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 TTLL7Q6ZT98 887 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 KCTD1Q719H9 257 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 FAM156AQ8NDB6 213 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 COA7Q96BR5 231 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 ASIC4Q96FT7 647 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 MAP6Q96JE9 813 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 LRFN3Q9BTN0 628 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 PDGFDQ9GZP0 370 aaPredicted RBP5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 TNFRSF10DQ9UBN6 386 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 SNX11Q9Y5W9 270 aa5.33□□□□□ -1.56
HMGN3P1-201ENST00000453847 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 HIP1RO75146 1068 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 TUSC2O75896 110 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 ZBED1O96006 694 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 LPLP06858 475 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 MYL3P08590 195 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 PTPN1P18031 435 aaKnown RBP5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 GJA9P57773 515 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 ALDH6A1Q02252 535 aaKnown RBP5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 ADCY1Q08828 1119 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 NFIAQ12857 509 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 TUSC3Q13454 348 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 UGT8Q16880 541 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 GRAMD1BQ3KR37 738 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 MROH9Q5TGP6 573 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 RTN4RL1Q86UN2 441 aaPredicted RBP5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 COL23A1Q86Y22 540 aaPredicted RBP5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 SLC41A1Q8IVJ1 513 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 ZZZ3Q8IYH5 903 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 KIAA0319LQ8IZA0 1049 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 NLGN4XQ8N0W4 816 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 PPM1NQ8N819 430 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 SHKBP1Q8TBC3 707 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 TSPEARQ8WU66 669 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 CSRNP2Q9H175 543 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 BHMT2Q9H2M3 363 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 LRRC4CQ9HCJ2 640 aa5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 PUF60Q9UHX1 559 aaKnown RBP5.32□□□□□ -1.56
HMGN3P1-201ENST00000453847 A0A1W2PQ45 241 aaPredicted RBP5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 A0A1W2PQY0 241 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 C1QTNF9BB2RNN3 333 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 FOSP01100 380 aaPredicted RBP5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 NTRK1P04629 796 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 TRAPPC10P48553 1259 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 FNTBP49356 437 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 KIF23Q02241 960 aaPredicted RBP5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 TRIM25Q14258 630 aaKnown RBP5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 MUM1Q2TAK8 710 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 TMEM95Q3KNT9 176 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 PLA2G4EQ3MJ16 856 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 BTBD8Q5XKL5 378 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 STEAP3Q658P3 488 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 XRRA1Q6P2D8 792 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 CCDC62Q6P9F0 684 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 UNQ6494/PRO21346Q6UXR6 183 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 USP45Q70EL2 814 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 GRAMD1CQ8IYS0 662 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 MIER2Q8N344 545 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 LZTR1Q8N653 840 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 SSH1Q8WYL5 1049 aa5.31□□□□□ -1.56
HMGN3P1-201ENST00000453847 TP53INP1Q96A56 240 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms