RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 RPL13P26373 211 aaKnown RBP15.07■□□□□ 0
UBE2D3-210ENST00000453744 HSPA9P38646 679 aaKnown RBP15.07■□□□□ 0
UBE2D3-210ENST00000453744 ATP11AP98196 1134 aa15.07■□□□□ 0
UBE2D3-210ENST00000453744 KCNMA1Q12791 1236 aa15.07■□□□□ 0
UBE2D3-210ENST00000453744 PRR16Q569H4 304 aa15.07■□□□□ 0
UBE2D3-210ENST00000453744 RCSD1Q6JBY9 416 aa15.07■□□□□ 0
UBE2D3-210ENST00000453744 NSMCE1Q8WV22 266 aa15.07■□□□□ 0
UBE2D3-210ENST00000453744 SETDB2Q96T68 719 aa15.07■□□□□ 0
UBE2D3-210ENST00000453744 LBHD1Q9BQE6 289 aaPredicted RBP15.07■□□□□ 0
UBE2D3-210ENST00000453744 OSBPL7Q9BZF2 842 aa15.07■□□□□ 0
UBE2D3-210ENST00000453744 CCDC188H7C350 402 aa15.06■□□□□ 0
UBE2D3-210ENST00000453744 DIAPH2O60879 1101 aa15.06■□□□□ 0
UBE2D3-210ENST00000453744 SEL1L2Q5TEA6 688 aa15.06■□□□□ 0
UBE2D3-210ENST00000453744 LRRC34Q8IZ02 419 aa15.06■□□□□ 0
UBE2D3-210ENST00000453744 STAMBPL1Q96FJ0 436 aa15.06■□□□□ 0
UBE2D3-210ENST00000453744 IL17RBQ9NRM6 502 aa15.06■□□□□ 0
UBE2D3-210ENST00000453744 CNOT8Q9UFF9 292 aaKnown RBP15.06■□□□□ 0
UBE2D3-210ENST00000453744 C6orf229H3BNL8 230 aa15.06■□□□□ 0
UBE2D3-210ENST00000453744 SNX1Q13596 522 aa15.06■□□□□ 0
UBE2D3-210ENST00000453744 TRIP13Q15645 432 aaPredicted RBP15.06■□□□□ 0
UBE2D3-210ENST00000453744 ZNF662Q6ZS27 426 aa15.06■□□□□ 0
UBE2D3-210ENST00000453744 CAPN12Q6ZSI9 719 aa15.06■□□□□ 0
UBE2D3-210ENST00000453744 NAP1L3Q99457 506 aaPredicted RBP15.06■□□□□ 0
UBE2D3-210ENST00000453744 USP11P51784 963 aa15.06■□□□□ 0
UBE2D3-210ENST00000453744 SARNPP82979 210 aaKnown RBP15.06■□□□□ 0
UBE2D3-210ENST00000453744 STMN4Q9H169 189 aaPredicted RBP15.06■□□□□ 0
UBE2D3-210ENST00000453744 DNM3Q9UQ16 869 aa15.06■□□□□ 0
UBE2D3-210ENST00000453744 POTEFA5A3E0 1075 aa15.05■□□□□ 0
UBE2D3-210ENST00000453744 RASGRF2O14827 1237 aa15.05■□□□□ 0
UBE2D3-210ENST00000453744 POTEIP0CG38 1075 aa15.05■□□□□ 0
UBE2D3-210ENST00000453744 STX2P32856 288 aa15.05■□□□□ 0
UBE2D3-210ENST00000453744 PMS2P54278 862 aa15.05■□□□□ 0
UBE2D3-210ENST00000453744 POTEGQ6S5H5 508 aa15.05■□□□□ 0
UBE2D3-210ENST00000453744 POTEEQ6S8J3 1075 aa15.05■□□□□ 0
UBE2D3-210ENST00000453744 INTS8Q75QN2 995 aaKnown RBP15.05■□□□□ 0
UBE2D3-210ENST00000453744 TAOK1Q7L7X3 1001 aa15.05■□□□□ 0
UBE2D3-210ENST00000453744 ERMNQ8TAM6 284 aa15.05■□□□□ 0
UBE2D3-210ENST00000453744 NEUROG2Q9H2A3 272 aa15.05■□□□□ 0
UBE2D3-210ENST00000453744 CNOT10Q9H9A5 744 aaKnown RBP15.05■□□□□ 0
UBE2D3-210ENST00000453744 BLOC1S4Q9NUP1 217 aa15.05■□□□□ 0
UBE2D3-210ENST00000453744 CCT8L1PA6NM43 557 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 TLR2O60603 784 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 ATRNO75882 1429 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 UCHL3P15374 230 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 GSTO1P78417 241 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 ARMC9Q7Z3E5 817 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 ZNF571Q7Z3V5 609 aaPredicted RBP15.05■□□□□ -0
UBE2D3-210ENST00000453744 MYCT1Q8N699 235 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 CEP95Q96GE4 821 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 IFT74Q96LB3 600 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 YIPF3Q9GZM5 350 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 PSTPIP2Q9H939 334 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 ENO4A6NNW6 628 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 TRAPPC3O43617 180 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 KIF1CO43896 1103 aaKnown RBP15.05■□□□□ -0
UBE2D3-210ENST00000453744 FNTAP49354 379 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 USH1GQ495M9 461 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 C12orf60Q5U649 245 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 LRIG3Q6UXM1 1119 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 KCTD1Q719H9 257 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 INPP4AQ96PE3 977 aaPredicted RBP15.05■□□□□ -0
UBE2D3-210ENST00000453744 SLC4A9Q96Q91 983 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 PPP1R12CQ9BZL4 782 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 NT5C3AQ9H0P0 336 aa15.05■□□□□ -0
UBE2D3-210ENST00000453744 USP17L15C9J2P7 530 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 USP17L13C9JLJ4 530 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 USP17L11C9JVI0 530 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 USP17L18D6R9N7 530 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 USP17L22D6RA61 530 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 USP17L17D6RBQ6 530 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 USP17L19D6RCP7 530 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 USP17L20D6RJB6 530 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 CALUO43852 315 aaPredicted RBP15.04■□□□□ -0
UBE2D3-210ENST00000453744 BTDP43251 543 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 CDK8P49336 464 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 SESN3P58005 492 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 USP17L24Q0WX57 530 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 DRP2Q13474 957 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 SLC29A2Q14542 456 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 CCDC6Q16204 474 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 USP17L6PQ6QN14 398 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 FAM47EQ6ZV65 393 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 HS2ST1Q7LGA3 356 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 OSGEPQ9NPF4 335 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 HOMER3Q9NSC5 361 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.04■□□□□ -01e-8■□□□□ 9.1
UBE2D3-210ENST00000453744 ZNF804BA4D1E1 1349 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 PJA2O43164 708 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 GCFC2P16383 781 aaKnown RBP15.04■□□□□ -0
UBE2D3-210ENST00000453744 PLCG2P16885 1265 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 GALCP54803 685 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 TBC1D10BQ4KMP7 808 aaPredicted RBP15.04■□□□□ -0
UBE2D3-210ENST00000453744 RPGRQ92834 1020 aaKnown RBP15.04■□□□□ -0
UBE2D3-210ENST00000453744 NKIRAS1Q9NYS0 192 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 NAGPAQ9UK23 515 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 LOC102724428A0A0B4J2F2 783 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 SIK1P57059 783 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 PSMD2Q13200 908 aa15.04■□□□□ -0
UBE2D3-210ENST00000453744 PREPLQ4J6C6 727 aaPredicted RBP15.04■□□□□ -0
UBE2D3-210ENST00000453744 NAIF1Q69YI7 327 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms