RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 OVOS2A0A0G2JMS6 1433 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 AKR1B1P15121 316 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 PPM1FP49593 454 aaPredicted RBP11.26□□□□□ -0.61
CTC1-202ENST00000449476 SF3B3Q15393 1217 aaKnown RBP11.26□□□□□ -0.61
CTC1-202ENST00000449476 EAPPQ56P03 285 aaPredicted RBP11.26□□□□□ -0.61
CTC1-202ENST00000449476 JPH2Q9BR39 696 aaPredicted RBP11.26□□□□□ -0.61
CTC1-202ENST00000449476 TRIM9Q9C026 710 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 HDAC6Q9UBN7 1215 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 ADD3Q9UEY8 706 aaKnown RBP11.26□□□□□ -0.61
CTC1-202ENST00000449476 ANAPC5Q9UJX4 755 aa11.26□□□□□ -0.61
CTC1-202ENST00000449476 A0A1B0GTH6 734 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 EIF3CLB5ME19 914 aaKnown RBP11.25□□□□□ -0.61
CTC1-202ENST00000449476 CRCPO75575 148 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 CCND2P30279 289 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 GPSM2P81274 684 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 NFIXQ14938 502 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 KNOP1Q1ED39 458 aaKnown RBP11.25□□□□□ -0.61
CTC1-202ENST00000449476 GLE1Q53GS7 698 aaKnown RBP11.25□□□□□ -0.61
CTC1-202ENST00000449476 PDXDC2PQ6P474 469 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 SMIM5Q71RC9 77 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 EIF3CQ99613 913 aaKnown RBP11.25□□□□□ -0.61
CTC1-202ENST00000449476 NXF1Q9UBU9 619 aaKnown RBP11.25□□□□□ -0.61
CTC1-202ENST00000449476 MAD1L1Q9Y6D9 718 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 HIP1RO75146 1068 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 KCNJ6P48051 423 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 SLC12A2P55011 1212 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 ZKSCAN8Q15776 578 aaPredicted RBP11.25□□□□□ -0.61
CTC1-202ENST00000449476 RNF10Q8N5U6 811 aaKnown RBP11.25□□□□□ -0.61
CTC1-202ENST00000449476 DCPSQ96C86 337 aaKnown RBP11.25□□□□□ -0.61
CTC1-202ENST00000449476 ZCCHC17Q9NP64 241 aaKnown RBP11.25□□□□□ -0.61
CTC1-202ENST00000449476 MRFAP1Q9Y605 127 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 IL9RQ01113 521 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 CUL1Q13616 776 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 SLMAPQ14BN4 828 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 ANKRD40Q6AI12 368 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 DNAJC24Q6P3W2 148 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 ENGASEQ8NFI3 743 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 SPZ1Q9BXG8 430 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 ZNF233A6NK53 670 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 K7ERI5 159 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 GIPC1O14908 333 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 C21orf2O43822 256 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 ARHGAP27Q6ZUM4 889 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 AFAP1L2Q8N4X5 818 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 RNF169Q8NCN4 708 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 NSMCE1Q8WV22 266 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 KCNB2Q92953 911 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 ANKRD36BP1Q96IX9 119 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 MED10Q9BTT4 135 aa11.25□□□□□ -0.61
CTC1-202ENST00000449476 LIMA1Q9UHB6 759 aaKnown RBP11.25□□□□□ -0.61
CTC1-202ENST00000449476 USP32Q8NFA0 1604 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 PSAPP07602 524 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 HNRNPH2P55795 449 aaKnown RBP11.24□□□□□ -0.61
CTC1-202ENST00000449476 CCDC38Q502W7 563 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 NFRKBQ6P4R8 1299 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 EEPD1Q7L9B9 569 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 RFX6Q8HWS3 928 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 CAPN11Q9UMQ6 739 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 HPS5Q9UPZ3 1129 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 KIDINS220Q9ULH0 1771 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 RASGRF2O14827 1237 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 CAMTA2O94983 1202 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 PRELPP51888 382 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 SBK1Q52WX2 424 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 PPP1R2P3Q6NXS1 205 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 XXYLT1Q8NBI6 393 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 OSBPL9Q96SU4 736 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 CHP1Q99653 195 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 SLC5A4Q9NY91 659 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 SALL3Q9BXA9 1300 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 GMNNO75496 209 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 TADA3O75528 432 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 KRT1P04264 644 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 INHBAP08476 426 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 CD58P19256 250 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 ABCD1P33897 745 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 STAT3P40763 770 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 GCLMP48507 274 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 RWDD2BP57060 319 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 PPP2R5CQ13362 524 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 TRIP13Q15645 432 aaPredicted RBP11.24□□□□□ -0.61
CTC1-202ENST00000449476 SUPT20HL1Q3ZLR7 823 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 RINT1Q6NUQ1 792 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 PADI6Q6TGC4 694 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 RNF207Q6ZRF8 634 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 SESTD1Q86VW0 696 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 DYDC2Q96IM9 177 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 RAB3IPQ96QF0 476 aaPredicted RBP11.24□□□□□ -0.61
CTC1-202ENST00000449476 EIF3BP55884 814 aaKnown RBP11.24□□□□□ -0.61
CTC1-202ENST00000449476 DPYDQ12882 1025 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 NAALADL2Q58DX5 795 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 FAM47CQ5HY64 1035 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 EFCAB13Q8IY85 973 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 ADSSL1Q8N142 457 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 TTLL6Q8N841 843 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 PPP4R1Q8TF05 950 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 HPS3Q969F9 1004 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 NACA2Q9H009 215 aa11.24□□□□□ -0.61
CTC1-202ENST00000449476 LRRD1A4D1F6 860 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 HMGB1P1B2RPK0 211 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms