RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 COL23A1Q86Y22 540 aaPredicted RBP10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 RNF41Q9H4P4 317 aaPredicted RBP10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 CYP39A1Q9NYL5 469 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 ATRNO75882 1429 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 PRKAB2O43741 272 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 PEX11AO75192 247 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 MAGEA8P43361 318 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 GNAQP50148 359 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 POLR2FP61218 127 aaKnown RBP10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 FUT2Q10981 343 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 FAM83BQ5T0W9 1011 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 SOGA3Q5TF21 947 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 CATIPQ7Z7H3 387 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 TBC1D16Q8TBP0 767 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 TRIM9Q9C026 710 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 KLHL14Q9P2G3 628 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 LTN1O94822 1766 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 ADAMTS13Q76LX8 1427 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 GSG1L2A8MUP6 293 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 LGR5O75473 907 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 PLTPP55058 493 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 RNASELQ05823 741 aaKnown RBP10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 CMPK2Q5EBM0 449 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 CNNM4Q6P4Q7 775 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 PEX26Q7Z412 305 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 ATL2Q8NHH9 583 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 RNF25Q96BH1 459 aaPredicted RBP10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 TRAPPC9Q96Q05 1148 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 MTA3Q9BTC8 594 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 CEP72Q9P209 647 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 C5P01031 1676 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 UNC5CO95185 931 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 GJB6O95452 261 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 PTDSS1P48651 473 aaKnown RBP10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 CROCCP2Q86T23 111 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 RBM12BQ8IXT5 1001 aaKnown RBP10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 MAGEB6Q8N7X4 407 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 SEC14L1Q92503 715 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 TXLNGYQ9BZA5 131 aa10.22□□□□□ -0.77
SYNPO2-204ENST00000448416 BAG3O95817 575 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 OR52E8Q6IFG1 317 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 CENPPQ6IPU0 288 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 IRGCQ6NXR0 463 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 C4orf32Q8N8J7 132 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 UTP4Q969X6 686 aaKnown RBP10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 EPB41L4BQ9H329 900 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 ZBTB3Q9H5J0 574 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 TXLNGQ9NUQ3 528 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 CTTNBP2NLQ9P2B4 639 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 DBR1Q9UK59 544 aaKnown RBP10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 MYH4Q9Y623 1939 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 LRP6O75581 1613 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 RICTORQ6R327 1708 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 TCRBV5S4A2TA0A5A2 114 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 ZSCAN9O15535 394 aaPredicted RBP10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 CCNB1P14635 433 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 SKIV2L2P42285 1042 aaKnown RBP10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 SCNN1BP51168 640 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 KCNMA1Q12791 1236 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 VSIG1Q86XK7 387 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 EPS8L3Q8TE67 593 aaKnown RBP10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 UCMAQ8WVF2 138 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 RMDN2Q96LZ7 410 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 SUDS3Q9H7L9 328 aaPredicted RBP10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 FBXO3Q9UK99 471 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 LMTK3Q96Q04 1460 aa10.21□□□□□ -0.77
SYNPO2-204ENST00000448416 MINDY4BA8MYZ0 360 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 PLCG1P19174 1290 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 IFIT1BQ5T764 474 aaKnown RBP10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 SYCP3Q8IZU3 236 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 ASAP3Q8TDY4 903 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 SYN2Q92777 582 aaPredicted RBP10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 PLEKHG4BQ96PX9 1271 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 CCSER1Q9C0I3 900 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 DAAM1Q9Y4D1 1078 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 ARFGEF2Q9Y6D5 1785 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 CHD4Q14839 1912 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 RASGRF2O14827 1237 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 GSTA2P09210 222 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 TPP2P29144 1249 aaPredicted RBP10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 INTS8Q75QN2 995 aaKnown RBP10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 FAM133AQ8N9E0 248 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 RBBP8NLQ8NC74 664 aaPredicted RBP10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 KIAA0895Q8NCT3 520 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 ATP8B4Q8TF62 1192 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 ESR2Q92731 530 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 GBP5Q96PP8 586 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 LSM14BQ9BX40 385 aaKnown RBP10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 MLXIPLQ9NP71 852 aa10.21□□□□□ -0.78
SYNPO2-204ENST00000448416 IFIT5Q13325 482 aaKnown RBP10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 SEC23AQ15436 765 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 PARP6Q2NL67 630 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 CCDC152Q4G0S7 254 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 ANKRD42Q8N9B4 389 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 OPTNQ96CV9 577 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 ABCF2Q9UG63 623 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 NFAT5O94916 1531 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 NVLO15381 856 aaKnown RBP10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 SESN3P58005 492 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms