RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 CCNYQ8ND76 341 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 RMND5BQ96G75 393 aaPredicted RBP9.55□□□□□ -0.88
NIPBL-202ENST00000448238 EPC1Q9H2F5 836 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 GUCY1B2O75343 617 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 RAB2AP61019 212 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 RFX6Q8HWS3 928 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 CMTM5Q96DZ9 223 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 KLHL25Q9H0H3 589 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 DISC1Q9NRI5 854 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 ANAPC7Q9UJX3 599 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 PTPDC1A2A3K4 754 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 COPEO14579 308 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 ETF1P62495 437 aaKnown RBP9.54□□□□□ -0.88
NIPBL-202ENST00000448238 SLC9C2Q5TAH2 1124 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 STAG2Q8N3U4 1231 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 KRT84Q9NSB2 600 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 MCCD1P59942 119 aaPredicted RBP9.54□□□□□ -0.88
NIPBL-202ENST00000448238 HABP4Q5JVS0 413 aaKnown RBP9.54□□□□□ -0.88
NIPBL-202ENST00000448238 CLEC4FQ8N1N0 589 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 HIC2Q96JB3 615 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 SEPT1Q8WYJ6 367 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 LARP4BQ92615 738 aaKnown RBP9.54□□□□□ -0.88
NIPBL-202ENST00000448238 FAM129BQ96TA1 746 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 TRIM51Q9BSJ1 452 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 ZMYND12Q9H0C1 365 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 DHX36Q9H2U1 1008 aaKnown RBP9.54□□□□□ -0.88
NIPBL-202ENST00000448238 HACD3Q9P035 362 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 WBP11Q9Y2W2 641 aaKnown RBP9.54□□□□□ -0.88
NIPBL-202ENST00000448238 IL15P40933 162 aaPredicted RBP9.54□□□□□ -0.88
NIPBL-202ENST00000448238 CBFBQ13951 182 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 CYP4F22Q6NT55 531 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.54□□□□□ -0.88
NIPBL-202ENST00000448238 COPB2P35606 906 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 CCT3P49368 545 aaKnown RBP9.54□□□□□ -0.88
NIPBL-202ENST00000448238 NCALDP61601 193 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 EPS8Q12929 822 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 DAB2IPQ5VWQ8 1189 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 ABI1Q8IZP0 508 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 CHAMP1Q96JM3 812 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 NLRP3Q96P20 1036 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 PLIN2Q99541 437 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 SYNPO2Q9UMS6 1093 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 LRPPRCP42704 1394 aaKnown RBP9.54□□□□□ -0.88
NIPBL-202ENST00000448238 TRAPPC10P48553 1259 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 HSPA13P48723 471 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 ADCY7P51828 1080 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 SLFN5Q08AF3 891 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 ZMYND11Q15326 602 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 METTL23Q86XA0 190 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 USP33Q8TEY7 942 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 ESYT1Q9BSJ8 1104 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 GCOM2Q9BZD3 368 aaPredicted RBP9.54□□□□□ -0.88
NIPBL-202ENST00000448238 PAG1Q9NWQ8 432 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 SYNDIG1LA6NDD5 238 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 RNF219Q5W0B1 726 aaPredicted RBP9.54□□□□□ -0.88
NIPBL-202ENST00000448238 EMBQ6PCB8 327 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 RETREG2Q8NC44 543 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 KCTD6Q8NC69 237 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 IMPAD1Q9NX62 359 aa9.54□□□□□ -0.88
NIPBL-202ENST00000448238 P3H2Q8IVL5 708 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 PRRG3Q9BZD7 231 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 RNF103O00237 685 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 FOXD4Q12950 439 aaPredicted RBP9.53□□□□□ -0.88
NIPBL-202ENST00000448238 ADRM1Q16186 407 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 SIX6OS1Q8N1H7 587 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 DNAJC7Q99615 494 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 SUPT3HB4E1H0 165 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 H0Y3Z8 333 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 JAK1P23458 1154 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 KRT20P35900 424 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 LBRQ14739 615 aaKnown RBP9.53□□□□□ -0.88
NIPBL-202ENST00000448238 ZNF174Q15697 407 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 CDC37Q16543 378 aaPredicted RBP9.53□□□□□ -0.88
NIPBL-202ENST00000448238 ANKLE2Q86XL3 938 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 INPP5DQ92835 1189 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 SETDB2Q96T68 719 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 EYA3Q99504 573 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 MRPL39Q9NYK5 338 aaKnown RBP9.53□□□□□ -0.88
NIPBL-202ENST00000448238 A0A0G2JND7 137 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 PNMA8CA0A1B0GUJ8 204 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.53□□□□□ -0.88
NIPBL-202ENST00000448238 CHP2O43745 196 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 LGALS3BPQ08380 585 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 OLFML2BQ68BL8 750 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 DARS2Q6PI48 645 aaKnown RBP9.53□□□□□ -0.88
NIPBL-202ENST00000448238 SLFN12Q8IYM2 578 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 MYOCDQ8IZQ8 938 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 RNASE11Q8TAA1 199 aaKnown RBP9.53□□□□□ -0.88
NIPBL-202ENST00000448238 HPCAL4Q9UM19 191 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 SF3B1O75533 1304 aaKnown RBP eCLIP9.53□□□□□ -0.883e-6■■■■■ 101.7
NIPBL-202ENST00000448238 FAM25AB3EWG3 89 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 FAM25CB3EWG5 89 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 FAM25GB3EWG6 89 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 LDHBP07195 334 aaKnown RBP9.53□□□□□ -0.88
NIPBL-202ENST00000448238 PLS3P13797 630 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 PIK3R1P27986 724 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 PIK3CAP42336 1068 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 DMPKQ09013 629 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 EFR3AQ14156 821 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 SYCP2LQ5T4T6 812 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms