RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 DSG3P32926 999 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 EPS15P42566 896 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 ITGB3BPQ13352 177 aaPredicted RBP21.5■■□□□ 1.03
FAM3A-215ENST00000447601 PDCL2Q8N4E4 241 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 BANK1Q8NDB2 785 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 REPS2Q8NFH8 660 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 TMOD4Q9NZQ9 345 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 PKD2L1Q9P0L9 805 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 CGNQ9P2M7 1197 aaKnown RBP21.5■■□□□ 1.03
FAM3A-215ENST00000447601 ZBTB39O15060 712 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 SLC16A3O15427 465 aaKnown RBP21.5■■□□□ 1.03
FAM3A-215ENST00000447601 TUBB2AQ13885 445 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 COG2Q14746 738 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 ARHGEF16Q5VV41 709 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 CACNA2D4Q7Z3S7 1137 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 SMCR8Q8TEV9 937 aaPredicted RBP21.5■■□□□ 1.03
FAM3A-215ENST00000447601 CCDC42Q96M95 316 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 TUBB2BQ9BVA1 445 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 NUCKS1Q9H1E3 243 aaKnown RBP21.5■■□□□ 1.03
FAM3A-215ENST00000447601 ARMCX3Q9UH62 379 aaPredicted RBP21.5■■□□□ 1.03
FAM3A-215ENST00000447601 ADAMTS5Q9UNA0 930 aa21.5■■□□□ 1.03
FAM3A-215ENST00000447601 ASTN1O14525 1302 aa21.49■■□□□ 1.03
FAM3A-215ENST00000447601 HIRAP54198 1017 aaPredicted RBP21.49■■□□□ 1.03
FAM3A-215ENST00000447601 KCNMA1Q12791 1236 aa21.49■■□□□ 1.03
FAM3A-215ENST00000447601 SNRNP48Q6IEG0 339 aaKnown RBP21.49■■□□□ 1.03
FAM3A-215ENST00000447601 WNK4Q96J92 1243 aa21.49■■□□□ 1.03
FAM3A-215ENST00000447601 METTL14Q9HCE5 456 aaKnown RBP21.49■■□□□ 1.03
FAM3A-215ENST00000447601 CEP72Q9P209 647 aa21.49■■□□□ 1.03
FAM3A-215ENST00000447601 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.49■■□□□ 1.03
FAM3A-215ENST00000447601 FZD1Q9UP38 647 aa21.49■■□□□ 1.03
FAM3A-215ENST00000447601 V9GYY5 206 aaPredicted RBP21.49■■□□□ 1.03
FAM3A-215ENST00000447601 CTAGE9A4FU28 777 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 SFI1A8K8P3 1242 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 NR3C1P04150 777 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 MYCLP12524 364 aaPredicted RBP21.48■■□□□ 1.03
FAM3A-215ENST00000447601 HERVK_113P62684 666 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 ELF2Q15723 593 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 RRAGAQ7L523 313 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 BAP1Q92560 729 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 TCEAL9Q9UHQ7 104 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 SSC5DA1L4H1 1573 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 LRRC53A6NM62 1247 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 ATP2A1O14983 1001 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 LYPLA2O95372 231 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 QARSP47897 775 aaKnown RBP21.48■■□□□ 1.03
FAM3A-215ENST00000447601 BAATQ14032 418 aaPredicted RBP21.48■■□□□ 1.03
FAM3A-215ENST00000447601 NFIL3Q16649 462 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 PDXDC1Q6P996 788 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 CATSPERGQ6ZRH7 1159 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 KIAA1328Q86T90 577 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 FAM178BQ8IXR5 827 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 SLC35F6Q8N357 371 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 CCDC155Q8N6L0 562 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 CARD6Q9BX69 1037 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 DBR1Q9UK59 544 aaKnown RBP21.48■■□□□ 1.03
FAM3A-215ENST00000447601 SAMM50Q9Y512 469 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 RIPK3Q9Y572 518 aa21.48■■□□□ 1.03
FAM3A-215ENST00000447601 RBBP6Q7Z6E9 1792 aaKnown RBP21.47■■□□□ 1.03
FAM3A-215ENST00000447601 EFCAB8A8MWE9 144 aa21.47■■□□□ 1.03
FAM3A-215ENST00000447601 EPB41P11171 864 aaKnown RBP21.47■■□□□ 1.03
FAM3A-215ENST00000447601 CCND2P30279 289 aa21.47■■□□□ 1.03
FAM3A-215ENST00000447601 JAK3P52333 1124 aa21.47■■□□□ 1.03
FAM3A-215ENST00000447601 KCNH2Q12809 1159 aa21.47■■□□□ 1.03
FAM3A-215ENST00000447601 EHBP1Q8NDI1 1231 aa21.47■■□□□ 1.03
FAM3A-215ENST00000447601 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.47■■□□□ 1.031e-8■■■□□ 17.1
FAM3A-215ENST00000447601 LSM14BQ9BX40 385 aaKnown RBP21.47■■□□□ 1.03
FAM3A-215ENST00000447601 MAF1Q9H063 256 aa21.47■■□□□ 1.03
FAM3A-215ENST00000447601 POLD4Q9HCU8 107 aa21.47■■□□□ 1.03
FAM3A-215ENST00000447601 ZNF214Q9UL59 606 aaPredicted RBP21.47■■□□□ 1.03
FAM3A-215ENST00000447601 MYPNQ86TC9 1320 aa21.47■■□□□ 1.03
FAM3A-215ENST00000447601 KRT86O43790 486 aa21.46■■□□□ 1.03
FAM3A-215ENST00000447601 NMT1P30419 496 aaKnown RBP21.46■■□□□ 1.03
FAM3A-215ENST00000447601 SPA17Q15506 151 aa21.46■■□□□ 1.03
FAM3A-215ENST00000447601 ODR4Q5SWX8 454 aa21.46■■□□□ 1.03
FAM3A-215ENST00000447601 PADI6Q6TGC4 694 aa21.46■■□□□ 1.03
FAM3A-215ENST00000447601 ZNF720Q7Z2F6 126 aa21.46■■□□□ 1.03
FAM3A-215ENST00000447601 LRRN4CLQ8ND94 238 aa21.46■■□□□ 1.03
FAM3A-215ENST00000447601 RBM46Q8TBY0 533 aaKnown RBP21.46■■□□□ 1.03
FAM3A-215ENST00000447601 SYN2Q92777 582 aaPredicted RBP21.46■■□□□ 1.03
FAM3A-215ENST00000447601 FIZ1Q96SL8 496 aa21.46■■□□□ 1.03
FAM3A-215ENST00000447601 NAPGQ99747 312 aaPredicted RBP21.46■■□□□ 1.03
FAM3A-215ENST00000447601 TEX13BQ9BXU2 312 aa21.46■■□□□ 1.03
FAM3A-215ENST00000447601 BCAS3Q9H6U6 928 aa21.46■■□□□ 1.03
FAM3A-215ENST00000447601 AFG3L2Q9Y4W6 797 aa21.46■■□□□ 1.03
FAM3A-215ENST00000447601 PCDHB13Q9Y5F0 798 aa21.46■■□□□ 1.03
FAM3A-215ENST00000447601 TADA3O75528 432 aa21.45■■□□□ 1.03
FAM3A-215ENST00000447601 ABL1P00519 1130 aa21.45■■□□□ 1.03
FAM3A-215ENST00000447601 AFPP02771 609 aaKnown RBP21.45■■□□□ 1.03
FAM3A-215ENST00000447601 XRCC5P13010 732 aaKnown RBP21.45■■□□□ 1.03
FAM3A-215ENST00000447601 SFNP31947 248 aa21.45■■□□□ 1.03
FAM3A-215ENST00000447601 KRT76Q01546 638 aa21.45■■□□□ 1.03
FAM3A-215ENST00000447601 CCDC122Q5T0U0 273 aa21.45■■□□□ 1.03
FAM3A-215ENST00000447601 UBXN4Q92575 508 aa21.45■■□□□ 1.03
FAM3A-215ENST00000447601 UPF1Q92900 1129 aaKnown RBP eCLIP21.45■■□□□ 1.032e-6■■■□□ 18.4
FAM3A-215ENST00000447601 JAKMIP2Q96AA8 810 aa21.45■■□□□ 1.03
FAM3A-215ENST00000447601 GPRASP2Q96D09 838 aa21.45■■□□□ 1.03
FAM3A-215ENST00000447601 HOXC10Q9NYD6 342 aa21.45■■□□□ 1.03
FAM3A-215ENST00000447601 ARHGAP20Q9P2F6 1191 aa21.45■■□□□ 1.03
FAM3A-215ENST00000447601 GUCA1BQ9UMX6 200 aa21.45■■□□□ 1.03
FAM3A-215ENST00000447601 ZMYM2Q9UBW7 1377 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms