RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 MFSD1Q9H3U5 465 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 RNF41Q9H4P4 317 aaPredicted RBP8.21□□□□□ -1.1
LRRC28-203ENST00000447360 BCAS3Q9H6U6 928 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 KAT14Q9H8E8 782 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 AGO3Q9H9G7 860 aaKnown RBP8.21□□□□□ -1.1
LRRC28-203ENST00000447360 HELLSQ9NRZ9 838 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 LZTS1Q9Y250 596 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 KIAA1217Q5T5P2 1943 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 CACNA1GO43497 2377 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 GCOM1H8Y6P7 765 aaPredicted RBP8.2□□□□□ -1.1
LRRC28-203ENST00000447360 FSCN2O14926 492 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 FIBPO43427 364 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 DHX16O60231 1041 aaKnown RBP8.2□□□□□ -1.1
LRRC28-203ENST00000447360 FGF18O76093 207 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 PARP1P09874 1014 aaKnown RBP8.2□□□□□ -1.1
LRRC28-203ENST00000447360 POLR2MP0CAP2 368 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 SCG2P13521 617 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 HOXA13P31271 388 aaPredicted RBP8.2□□□□□ -1.1
LRRC28-203ENST00000447360 CD52P31358 61 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 ERVFC1P60507 584 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 ITIH3Q06033 890 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 TRAF1Q13077 416 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 PPFIA1Q13136 1202 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 PUM1Q14671 1186 aaKnown RBP eCLIP8.2□□□□□ -1.1
LRRC28-203ENST00000447360 IER5Q5VY09 327 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 CES5AQ6NT32 575 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 TICAM2Q86XR7 235 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 DNAJB3Q8WWF6 145 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 MTMR8Q96EF0 704 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 YTHDC1Q96MU7 727 aaKnown RBP8.2□□□□□ -1.1
LRRC28-203ENST00000447360 VAT1LQ9HCJ6 419 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 NGRNQ9NPE2 291 aaKnown RBP8.2□□□□□ -1.1
LRRC28-203ENST00000447360 TUBE1Q9UJT0 475 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 PADI3Q9ULW8 664 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 SUPT16HQ9Y5B9 1047 aaKnown RBP8.2□□□□□ -1.1
LRRC28-203ENST00000447360 PCDHA1Q9Y5I3 950 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 CDY2AQ9Y6F7 541 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 ATG2AQ2TAZ0 1938 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 CEP250Q9BV73 2442 aa8.2□□□□□ -1.1
LRRC28-203ENST00000447360 CHD8Q9HCK8 2581 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 C2CD4DB7Z1M9 353 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 ZBTB5O15062 677 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 KRT37O76014 449 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 LMNAP02545 664 aaKnown RBP8.19□□□□□ -1.1
LRRC28-203ENST00000447360 AOC1P19801 751 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 SP100P23497 879 aaPredicted RBP8.19□□□□□ -1.1
LRRC28-203ENST00000447360 SARSP49591 514 aaKnown RBP8.19□□□□□ -1.1
LRRC28-203ENST00000447360 HAND2P61296 217 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 MRPS6P82932 125 aaKnown RBP8.19□□□□□ -1.1
LRRC28-203ENST00000447360 MRPS9P82933 396 aaKnown RBP8.19□□□□□ -1.1
LRRC28-203ENST00000447360 PLCB3Q01970 1234 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 SEMA3FQ13275 785 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 ANGPT1Q15389 498 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 GRIK4Q16099 956 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 MCMDC2Q4G0Z9 681 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 MARCH8Q5T0T0 291 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 SPOUT1Q5T280 376 aaKnown RBP8.19□□□□□ -1.1
LRRC28-203ENST00000447360 UTP14CQ5TAP6 766 aaKnown RBP8.19□□□□□ -1.1
LRRC28-203ENST00000447360 CCDC105Q8IYK2 499 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 ZDHHC14Q8IZN3 488 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 GIMAP8Q8ND71 665 aaPredicted RBP8.19□□□□□ -1.1
LRRC28-203ENST00000447360 CASP10Q92851 521 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 EVI5LQ96CN4 794 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 RTP3Q9BQQ7 232 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 ZKSCAN3Q9BRR0 538 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 ADAM7Q9H2U9 754 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 TMEM260Q9NX78 707 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 ERAP1Q9NZ08 941 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 PUF60Q9UHX1 559 aaKnown RBP8.19□□□□□ -1.1
LRRC28-203ENST00000447360 LRFN2Q9ULH4 789 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 USTQ9Y2C2 406 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 PCDHB7Q9Y5E2 793 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 PCDHB15Q9Y5E8 787 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 CHD6Q8TD26 2715 aa8.19□□□□□ -1.1
LRRC28-203ENST00000447360 RRN3P2A6NIE6 340 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 TRIM6-TRIM34B2RNG4 842 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 M0QZ92 97 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 PPP1R11O60927 126 aaPredicted RBP8.18□□□□□ -1.1
LRRC28-203ENST00000447360 TCF7P36402 384 aaPredicted RBP8.18□□□□□ -1.1
LRRC28-203ENST00000447360 MTHFRP42898 656 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 PAK2Q13177 524 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 CWF19L1Q69YN2 538 aaKnown RBP8.18□□□□□ -1.1
LRRC28-203ENST00000447360 XRRA1Q6P2D8 792 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 FCHSD1Q86WN1 690 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 TBC1D10CQ8IV04 446 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 THNSL1Q8IYQ7 743 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 FLCNQ8NFG4 579 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 KCNG4Q8TDN1 519 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 MRPS27Q92552 414 aaKnown RBP8.18□□□□□ -1.1
LRRC28-203ENST00000447360 ZSCAN10Q96SZ4 725 aaPredicted RBP8.18□□□□□ -1.1
LRRC28-203ENST00000447360 TCF25Q9BQ70 676 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 APOL5Q9BWW9 433 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 POMKQ9H5K3 350 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 DLL3Q9NYJ7 618 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 PCDHB8Q9UN66 801 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 PCDHB13Q9Y5F0 798 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 FRMPD4Q14CM0 1322 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 IGSF9BQ9UPX0 1349 aa8.18□□□□□ -1.1
LRRC28-203ENST00000447360 TBKBP1A7MCY6 615 aa8.17□□□□□ -1.1
LRRC28-203ENST00000447360 HIDE1A8MVS5 230 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms