RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ITGB1BP2Q9UKP3 347 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 MICAL3Q7RTP6 2002 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 PSMC1P62191 440 aaKnown RBP8.46□□□□□ -1.06
SMG1-202ENST00000446231 DDX25Q9UHL0 483 aaKnown RBP8.46□□□□□ -1.06
SMG1-202ENST00000446231 CPSF1Q10570 1443 aaKnown RBP8.46□□□□□ -1.06
SMG1-202ENST00000446231 UBOX5O94941 541 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 MYBL2P10244 700 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 FGFR4P22455 802 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 AP1B1Q10567 949 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 CWF19L1Q69YN2 538 aaKnown RBP8.46□□□□□ -1.06
SMG1-202ENST00000446231 NESP48681 1621 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 BCORL1Q5H9F3 1711 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 ITGA6P23229 1130 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 ZSCAN29Q8IWY8 852 aaPredicted RBP8.46□□□□□ -1.06
SMG1-202ENST00000446231 CD302Q8IX05 232 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 CLMNQ96JQ2 1002 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.46□□□□□ -1.06
SMG1-202ENST00000446231 RTN3O95197 1032 aaPredicted RBP8.46□□□□□ -1.06
SMG1-202ENST00000446231 CHRNA3P32297 505 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 THEMIS2Q5TEJ8 643 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 IRGCQ6NXR0 463 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 RNF26Q9BY78 433 aaPredicted RBP8.46□□□□□ -1.06
SMG1-202ENST00000446231 FBXO2Q9UK22 296 aaPredicted RBP8.46□□□□□ -1.06
SMG1-202ENST00000446231 DNMBPQ6XZF7 1577 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 PODXLO00592 558 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 TMPRSS15P98073 1019 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 ADSSL1Q8N142 457 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 UBXN6Q9BZV1 441 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 ARHGAP31Q2M1Z3 1444 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 ZCCHC18P0CG32 403 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 PLCG2P16885 1265 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 NEK8Q86SG6 692 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 ZNF652Q9Y2D9 606 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 ABCD1P33897 745 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 ARFIP2P53365 341 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 FAM47AQ5JRC9 791 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 TPRP12270 2363 aaKnown RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 MDM2Q00987 491 aaPredicted RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 PROM2Q8N271 834 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 NDUFA13Q9P0J0 144 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 L3MBTL1Q9Y468 752 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 DNAJC6O75061 913 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 GCNT3O95395 438 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 ZCWPW2Q504Y3 356 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 STK17AQ9UEE5 414 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 DUOX2Q9NRD8 1548 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 ERVK-7P63135 1459 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 PRLRP16471 622 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 ARMCX6Q7L4S7 300 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 KIAA1024Q9UPX6 916 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 NOP56O00567 594 aaKnown RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 CALB2P22676 271 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 KLK7P49862 253 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 DSG1Q02413 1049 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 MB21D2Q8IYB1 491 aaPredicted RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 DCAF5Q96JK2 942 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 TTC25Q96NG3 672 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 RPS6KC1Q96S38 1066 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 BARGINQ6ZT62 677 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 TRAPPC9Q96Q05 1148 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 DMGDHQ9UI17 866 aaKnown RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 TACC3Q9Y6A5 838 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 MED14O60244 1454 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 ANKRD40Q6AI12 368 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 CATSPER1Q8NEC5 780 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 TEKT1Q969V4 418 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 PPWD1Q96BP3 646 aaKnown RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 SCYL1Q96KG9 808 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 LY9Q9HBG7 655 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 ITGB3BPQ13352 177 aaPredicted RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 NUB1Q9Y5A7 615 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 EZH2Q15910 746 aaKnown RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 RNF207Q6ZRF8 634 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 RNF169Q8NCN4 708 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 OPTNQ96CV9 577 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 CARD9Q9H257 536 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 SRRM3A6NNA2 597 aaPredicted RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 DRD4P21917 467 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 OCA2Q04671 838 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 OLFML3Q9NRN5 406 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 ARPP21Q9UBL0 812 aaPredicted RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 INHBAP08476 426 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 TSEN2Q8NCE0 465 aaKnown RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 PIGOQ8TEQ8 1089 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 TRIM51Q9BSJ1 452 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 PCDHA4Q9UN74 947 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 O00370 1275 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 PDE2AO00408 941 aaPredicted RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 FDPSP14324 419 aaKnown RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 ASPHQ12797 758 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 FAM161BQ96MY7 647 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 B2RBV5 119 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 TARSP26639 723 aaKnown RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 RASA3Q14644 834 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 RCN1Q15293 331 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 TMEM259Q4ZIN3 620 aa8.45□□□□□ -1.06
SMG1-202ENST00000446231 SUCLA2Q9P2R7 463 aaPredicted RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 SAP30BPQ9UHR5 308 aaKnown RBP8.45□□□□□ -1.06
SMG1-202ENST00000446231 PLEKP08567 350 aaPredicted RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 GCLCP48506 637 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms