RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 NLGN4XQ8N0W4 816 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 TXNDC5Q8NBS9 432 aaKnown RBP4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 ARRDC4Q8NCT1 418 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 CHST13Q8NET6 341 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 UHMK1Q8TAS1 419 aaKnown RBP4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 PIP4K2CQ8TBX8 421 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 PMFBP1Q8TBY8 1022 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 SPATA9Q9BWV2 254 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 OSBPL2Q9H1P3 480 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 ARHGEF4Q9NR80 690 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 FBXL7Q9UJT9 491 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 CROTQ9UKG9 612 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 MAST1Q9Y2H9 1570 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 CDC42BPBQ9Y5S2 1711 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 ANKRD62A6NC57 917 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 SOD2P04179 222 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 GJA4P35212 333 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 IL13P35225 146 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 GRIA2P42262 883 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 MAGEA10P43363 369 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 PAK1Q13153 545 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 LONRF2Q1L5Z9 754 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 DENND5AQ6IQ26 1287 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 ARHGEF18Q6ZSZ5 1173 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 LRP10Q7Z4F1 713 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 MTDHQ86UE4 582 aaKnown RBP4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 CDK5RAP1Q96SZ6 601 aaKnown RBP4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 CARD11Q9BXL7 1154 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 CCDC113Q9H0I3 377 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 ZSWIM4Q9H7M6 989 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 PRKRIP1Q9H875 184 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 DSEQ9UL01 958 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 INVSQ9Y283 1065 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 MYRFQ9Y2G1 1151 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 TTC37Q6PGP7 1564 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 SYCP2Q9BX26 1530 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 FAM135AQ9P2D6 1515 aa4.55□□□□□ -1.68
HMGB3P11-201ENST00000440127 USP47Q96K76 1375 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 SPAG9O60271 1321 aaKnown RBP4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 LRG1P02750 347 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 ENO2P09104 434 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 NCLP19338 710 aaKnown RBP4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 SSRP1Q08945 709 aaKnown RBP4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 TUSC3Q13454 348 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 SERINC3Q13530 473 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 SMAD2Q15796 467 aaKnown RBP4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 ZXDCQ2QGD7 858 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 FAM47CQ5HY64 1035 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 EGFLAMQ63HQ2 1017 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 SDE2Q6IQ49 451 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 HHIPL2Q6UWX4 724 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 DPP8Q6V1X1 898 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 KCTD1Q719H9 257 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 JAZF1Q86VZ6 243 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 REXO1L1PQ8IX06 675 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 PTPRN2Q92932 1015 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 OSBP2Q969R2 916 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 LOXL4Q96JB6 756 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 ZSWIM3Q96MP5 696 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 JAM3Q9BX67 310 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 PDGFDQ9GZP0 370 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 JADE2Q9NQC1 790 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 MSRB2Q9Y3D2 182 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 DUOX2Q9NRD8 1548 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 ARHGEF12Q9NZN5 1544 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 RALGAPBQ86X10 1494 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 CCDC144AA2RUR9 1427 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 RTEL1-TNFRSF6BF6WH68 1400 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 ERBINQ96RT1 1412 aa4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 ZCCHC11Q5TAX3 1644 aaKnown RBP4.54□□□□□ -1.68
HMGB3P11-201ENST00000440127 ROCK2O75116 1388 aaKnown RBP4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 MYO5CQ9NQX4 1742 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 TRBV23-1A0A0A0MS06 115 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 SLC27A2O14975 620 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 FAHP16930 419 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 GABREP78334 506 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 ST5P78524 1137 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 TBC1D10BQ4KMP7 808 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 PAN2Q504Q3 1202 aaKnown RBP4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 CPZQ66K79 652 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 TMC5Q6UXY8 1006 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 RALYLQ86SE5 291 aaKnown RBP4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 STK32CQ86UX6 486 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 CIR1Q86X95 450 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 DTX3Q8N9I9 347 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 KISS1RQ969F8 398 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 KCNJ15Q99712 375 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 POLR3GLQ9BT43 218 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 ARHGAP20Q9P2F6 1191 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 DUSP10Q9Y6W6 482 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 TRAPPC8Q9Y2L5 1435 aa4.53□□□□□ -1.68
HMGB3P11-201ENST00000440127 UNC13BO14795 1591 aa4.53□□□□□ -1.69
HMGB3P11-201ENST00000440127 PLXNC1O60486 1568 aa4.53□□□□□ -1.69
HMGB3P11-201ENST00000440127 ARAP3Q8WWN8 1544 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 WDR7Q9Y4E6 1490 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 ST20-MTHFSA0A0A6YYL1 179 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 NPEPPSL1A6NEC2 478 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 ARNTLO00327 626 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms