RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 RGL1Q9NZL6 768 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 ARID2Q68CP9 1835 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 COL1A2P08123 1366 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 HBP1O60381 514 aa20.58■□□□□ 0.89
HDAC6-208ENST00000438518 CDC25AP30304 524 aa20.58■□□□□ 0.89
HDAC6-208ENST00000438518 PSEN2P49810 448 aa20.58■□□□□ 0.89
HDAC6-208ENST00000438518 UBE2HP62256 183 aa20.58■□□□□ 0.89
HDAC6-208ENST00000438518 PRKCEQ02156 737 aa20.58■□□□□ 0.89
HDAC6-208ENST00000438518 PTPN11Q06124 597 aaPredicted RBP20.58■□□□□ 0.89
HDAC6-208ENST00000438518 MFSD10Q14728 455 aa20.58■□□□□ 0.89
HDAC6-208ENST00000438518 CXCL17Q6UXB2 119 aa20.58■□□□□ 0.89
HDAC6-208ENST00000438518 CKAP2LQ8IYA6 745 aa20.58■□□□□ 0.89
HDAC6-208ENST00000438518 KAT2BQ92831 832 aa20.58■□□□□ 0.89
HDAC6-208ENST00000438518 CUEDC2Q9H467 287 aa20.58■□□□□ 0.89
HDAC6-208ENST00000438518 ANKEF1Q9NU02 776 aa20.58■□□□□ 0.89
HDAC6-208ENST00000438518 STK17AQ9UEE5 414 aa20.58■□□□□ 0.89
HDAC6-208ENST00000438518 A0A1W2PQ45 241 aaPredicted RBP20.57■□□□□ 0.88
HDAC6-208ENST00000438518 A0A1W2PQY0 241 aa20.57■□□□□ 0.88
HDAC6-208ENST00000438518 POTEB3A0JP26 581 aa20.57■□□□□ 0.88
HDAC6-208ENST00000438518 YWHABP31946 246 aaKnown RBP20.57■□□□□ 0.88
HDAC6-208ENST00000438518 IRX5P78411 483 aaPredicted RBP20.57■□□□□ 0.88
HDAC6-208ENST00000438518 CTTNQ14247 550 aaKnown RBP20.57■□□□□ 0.88
HDAC6-208ENST00000438518 UGCGQ16739 394 aa20.57■□□□□ 0.88
HDAC6-208ENST00000438518 KIAA0753Q2KHM9 967 aa20.57■□□□□ 0.88
HDAC6-208ENST00000438518 TMEM119Q4V9L6 283 aa20.57■□□□□ 0.88
HDAC6-208ENST00000438518 SPECC1Q5M775 1068 aa20.57■□□□□ 0.88
HDAC6-208ENST00000438518 NFRKBQ6P4R8 1299 aa20.57■□□□□ 0.88
HDAC6-208ENST00000438518 POTEBQ6S5H4 581 aa20.57■□□□□ 0.88
HDAC6-208ENST00000438518 SESTD1Q86VW0 696 aa20.57■□□□□ 0.88
HDAC6-208ENST00000438518 TRIM50Q86XT4 487 aa20.57■□□□□ 0.88
HDAC6-208ENST00000438518 EXOC8Q8IYI6 725 aa20.57■□□□□ 0.88
HDAC6-208ENST00000438518 NIFKQ9BYG3 293 aaKnown RBP20.57■□□□□ 0.88
HDAC6-208ENST00000438518 STARD7Q9NQZ5 370 aa20.57■□□□□ 0.88
HDAC6-208ENST00000438518 DBR1Q9UK59 544 aaKnown RBP20.57■□□□□ 0.88
HDAC6-208ENST00000438518 DNM3Q9UQ16 869 aa20.57■□□□□ 0.88
HDAC6-208ENST00000438518 HPSEQ9Y251 543 aa20.57■□□□□ 0.88
HDAC6-208ENST00000438518 ZNF862O60290 1169 aa20.56■□□□□ 0.88
HDAC6-208ENST00000438518 GRB10Q13322 594 aa20.56■□□□□ 0.88
HDAC6-208ENST00000438518 KARSQ15046 597 aaKnown RBP20.56■□□□□ 0.88
HDAC6-208ENST00000438518 PLCB4Q15147 1175 aa20.56■□□□□ 0.88
HDAC6-208ENST00000438518 ZNF484Q5JVG2 852 aa20.56■□□□□ 0.88
HDAC6-208ENST00000438518 ABHD8Q96I13 439 aa20.56■□□□□ 0.88
HDAC6-208ENST00000438518 MAGEF1Q9HAY2 307 aa20.56■□□□□ 0.88
HDAC6-208ENST00000438518 DDX19AQ9NUU7 478 aaKnown RBP20.56■□□□□ 0.88
HDAC6-208ENST00000438518 USP25Q9UHP3 1055 aa20.56■□□□□ 0.88
HDAC6-208ENST00000438518 KIAA1024Q9UPX6 916 aa20.56■□□□□ 0.88
HDAC6-208ENST00000438518 TRPC6Q9Y210 931 aa20.56■□□□□ 0.88
HDAC6-208ENST00000438518 NRCAMQ92823 1304 aa20.55■□□□□ 0.88
HDAC6-208ENST00000438518 BRCA2P51587 3418 aa20.55■□□□□ 0.88
HDAC6-208ENST00000438518 A0A0U1RQG5 324 aaPredicted RBP20.55■□□□□ 0.88
HDAC6-208ENST00000438518 GNAT1P11488 350 aa20.55■□□□□ 0.88
HDAC6-208ENST00000438518 ATP4AP20648 1035 aa20.55■□□□□ 0.88
HDAC6-208ENST00000438518 PTMSP20962 102 aa20.55■□□□□ 0.88
HDAC6-208ENST00000438518 RRAGBQ5VZM2 374 aa20.55■□□□□ 0.88
HDAC6-208ENST00000438518 POTEGQ6S5H5 508 aa20.55■□□□□ 0.88
HDAC6-208ENST00000438518 USP49Q70CQ1 688 aa20.55■□□□□ 0.88
HDAC6-208ENST00000438518 IQUBQ8NA54 791 aa20.55■□□□□ 0.88
HDAC6-208ENST00000438518 CCDC43Q96MW1 224 aaKnown RBP20.55■□□□□ 0.88
HDAC6-208ENST00000438518 PNMA5Q96PV4 448 aa20.55■□□□□ 0.88
HDAC6-208ENST00000438518 WRAP73Q9P2S5 460 aaPredicted RBP20.55■□□□□ 0.88
HDAC6-208ENST00000438518 SEPT9Q9UHD8 586 aaPredicted RBP20.55■□□□□ 0.88
HDAC6-208ENST00000438518 KAT6AQ92794 2004 aa20.54■□□□□ 0.88
HDAC6-208ENST00000438518 RRN3P2A6NIE6 340 aa20.54■□□□□ 0.88
HDAC6-208ENST00000438518 PRPF40AO75400 957 aaKnown RBP20.54■□□□□ 0.88
HDAC6-208ENST00000438518 STBD1O95210 358 aa20.54■□□□□ 0.88
HDAC6-208ENST00000438518 COL6A1P12109 1028 aa20.54■□□□□ 0.88
HDAC6-208ENST00000438518 PFKFB1P16118 471 aa20.54■□□□□ 0.88
HDAC6-208ENST00000438518 MARK3P27448 753 aa20.54■□□□□ 0.88
HDAC6-208ENST00000438518 MNX1P50219 401 aaPredicted RBP20.54■□□□□ 0.88
HDAC6-208ENST00000438518 C7orf31Q8N865 590 aa20.54■□□□□ 0.88
HDAC6-208ENST00000438518 FSIP1Q8NA03 581 aa20.54■□□□□ 0.88
HDAC6-208ENST00000438518 CCDC34Q96HJ3 373 aa20.54■□□□□ 0.88
HDAC6-208ENST00000438518 JPH2Q9BR39 696 aaPredicted RBP20.54■□□□□ 0.88
HDAC6-208ENST00000438518 RNPEPQ9H4A4 650 aa20.54■□□□□ 0.88
HDAC6-208ENST00000438518 KCNH3Q9ULD8 1083 aa20.54■□□□□ 0.88
HDAC6-208ENST00000438518 MROH7Q68CQ1 1323 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 DDX11L8A8MPP1 907 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 EYA4O95677 639 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 PLCG1P19174 1290 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 HOXC8P31273 242 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 STAT6P42226 847 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 ITGA7Q13683 1181 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 ZRSR1Q15695 479 aaKnown RBP20.53■□□□□ 0.88
HDAC6-208ENST00000438518 ECM1Q16610 540 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 C1orf53Q5VUE5 145 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 ANO5Q75V66 913 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 NECAB2Q7Z6G3 386 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 TNS4Q8IZW8 715 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 SLC43A3Q8NBI5 491 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 VTI1AQ96AJ9 217 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 C11orf49Q9H6J7 331 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 KCND2Q9NZV8 630 aa20.53■□□□□ 0.88
HDAC6-208ENST00000438518 A0A1B0GVL5 298 aa20.52■□□□□ 0.88
HDAC6-208ENST00000438518 GAS2O43903 313 aaKnown RBP20.52■□□□□ 0.88
HDAC6-208ENST00000438518 RPLP2P05387 115 aaKnown RBP20.52■□□□□ 0.88
HDAC6-208ENST00000438518 SMIM10L2AP0DMW4 78 aa20.52■□□□□ 0.88
HDAC6-208ENST00000438518 SMIM10L2BP0DMW5 78 aa20.52■□□□□ 0.88
HDAC6-208ENST00000438518 SYKP43405 635 aa20.52■□□□□ 0.88
HDAC6-208ENST00000438518 RARRES1P49788 294 aa20.52■□□□□ 0.88
HDAC6-208ENST00000438518 FAM160A1Q05DH4 1040 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms