RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 NCLP19338 710 aaKnown RBP12.38□□□□□ -0.43
HMGCL-204ENST00000436439 HOXC8P31273 242 aa12.38□□□□□ -0.43
HMGCL-204ENST00000436439 TOB1P50616 345 aaPredicted RBP12.38□□□□□ -0.43
HMGCL-204ENST00000436439 ADCY7P51828 1080 aa12.38□□□□□ -0.43
HMGCL-204ENST00000436439 GRB10Q13322 594 aa12.38□□□□□ -0.43
HMGCL-204ENST00000436439 USP17L6PQ6QN14 398 aa12.38□□□□□ -0.43
HMGCL-204ENST00000436439 KRT25Q7Z3Z0 450 aa12.38□□□□□ -0.43
HMGCL-204ENST00000436439 ADAMTS19Q8TE59 1207 aa12.38□□□□□ -0.43
HMGCL-204ENST00000436439 LEO1Q8WVC0 666 aaPredicted RBP12.38□□□□□ -0.43
HMGCL-204ENST00000436439 CUL5Q93034 780 aa12.38□□□□□ -0.43
HMGCL-204ENST00000436439 SPATA32Q96LK8 384 aa12.38□□□□□ -0.43
HMGCL-204ENST00000436439 INPP4AQ96PE3 977 aaPredicted RBP12.38□□□□□ -0.43
HMGCL-204ENST00000436439 OSBPL7Q9BZF2 842 aa12.38□□□□□ -0.43
HMGCL-204ENST00000436439 TFIP11Q9UBB9 837 aaKnown RBP12.38□□□□□ -0.43
HMGCL-204ENST00000436439 NOL7Q9UMY1 257 aaKnown RBP12.38□□□□□ -0.43
HMGCL-204ENST00000436439 H3BRB1 525 aa12.37□□□□□ -0.43
HMGCL-204ENST00000436439 PIK3CDO00329 1044 aa12.37□□□□□ -0.43
HMGCL-204ENST00000436439 MEIS2O14770 477 aa12.37□□□□□ -0.43
HMGCL-204ENST00000436439 TREHO43280 583 aa12.37□□□□□ -0.43
HMGCL-204ENST00000436439 FIBPO43427 364 aa12.37□□□□□ -0.43
HMGCL-204ENST00000436439 PRPF40AO75400 957 aaKnown RBP12.37□□□□□ -0.43
HMGCL-204ENST00000436439 PARNO95453 639 aaKnown RBP12.37□□□□□ -0.43
HMGCL-204ENST00000436439 ICAM3P32942 547 aa12.37□□□□□ -0.43
HMGCL-204ENST00000436439 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
HMGCL-204ENST00000436439 EARS2Q5JPH6 523 aaKnown RBP12.37□□□□□ -0.43
HMGCL-204ENST00000436439 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.37□□□□□ -0.43
HMGCL-204ENST00000436439 CYFIP1Q7L576 1253 aa12.37□□□□□ -0.43
HMGCL-204ENST00000436439 SERINC5Q86VE9 423 aa12.37□□□□□ -0.43
HMGCL-204ENST00000436439 TRIM50Q86XT4 487 aa12.37□□□□□ -0.43
HMGCL-204ENST00000436439 REXO1Q8N1G1 1221 aaKnown RBP12.37□□□□□ -0.43
HMGCL-204ENST00000436439 LINC00301Q8NCQ3 95 aa12.37□□□□□ -0.43
HMGCL-204ENST00000436439 RNPEPQ9H4A4 650 aa12.37□□□□□ -0.43
HMGCL-204ENST00000436439 TUT1Q9H6E5 874 aaKnown RBP12.37□□□□□ -0.43
HMGCL-204ENST00000436439 PSTPIP2Q9H939 334 aa12.37□□□□□ -0.43
HMGCL-204ENST00000436439 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.37□□□□□ -0.43
HMGCL-204ENST00000436439 ATG2AQ2TAZ0 1938 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 CCDC194A0A1B0GVG4 234 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 ABHD14A-ACY1A0A1B0GW23 586 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 C17orf102A2RUQ5 167 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 SPATA31C2B4DYI2 1134 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 ADAMTS3O15072 1205 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 GTPBP6O43824 516 aaPredicted RBP12.36□□□□□ -0.43
HMGCL-204ENST00000436439 PPP6R2O75170 966 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 GJB5O95377 273 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 BMP15O95972 392 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 SMIM10L2AP0DMW4 78 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 SMIM10L2BP0DMW5 78 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 BMP1P13497 986 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 THPOP40225 353 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 MRE11P49959 708 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 KCNQ1P51787 676 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 UBE2HP62256 183 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 SLC39A14Q15043 492 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 SKIV2LQ15477 1246 aaKnown RBP12.36□□□□□ -0.43
HMGCL-204ENST00000436439 FAM117BQ6P1L5 589 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 PIK3AP1Q6ZUJ8 805 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 DBF4BQ8NFT6 615 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 KCNG4Q8TDN1 519 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 GDPD5Q8WTR4 605 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 ATP6V0A1Q93050 837 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 NECAB3Q96P71 396 aaPredicted RBP12.36□□□□□ -0.43
HMGCL-204ENST00000436439 UHRF1Q96T88 793 aaPredicted RBP12.36□□□□□ -0.43
HMGCL-204ENST00000436439 GPR20Q99678 358 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 ZBED2Q9BTP6 218 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 GDPD2Q9HCC8 539 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 CEP131Q9UPN4 1083 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 CLIC4Q9Y696 253 aa12.36□□□□□ -0.43
HMGCL-204ENST00000436439 LINC01553A4QN01 128 aa12.35□□□□□ -0.43
HMGCL-204ENST00000436439 RSPH10B2B2RC85 870 aa12.35□□□□□ -0.43
HMGCL-204ENST00000436439 LGR5O75473 907 aa12.35□□□□□ -0.43
HMGCL-204ENST00000436439 STAM2O75886 525 aa12.35□□□□□ -0.43
HMGCL-204ENST00000436439 RSPH10BP0C881 870 aa12.35□□□□□ -0.43
HMGCL-204ENST00000436439 AP3B2Q13367 1082 aa12.35□□□□□ -0.43
HMGCL-204ENST00000436439 ORC2Q13416 577 aaPredicted RBP12.35□□□□□ -0.43
HMGCL-204ENST00000436439 IKBKEQ14164 716 aa12.35□□□□□ -0.43
HMGCL-204ENST00000436439 NONOQ15233 471 aaKnown RBP eCLIP12.35□□□□□ -0.43
HMGCL-204ENST00000436439 PTPAQ15257 358 aa12.35□□□□□ -0.43
HMGCL-204ENST00000436439 SF3A1Q15459 793 aaKnown RBP12.35□□□□□ -0.43
HMGCL-204ENST00000436439 GNPTABQ3T906 1256 aa12.35□□□□□ -0.43
HMGCL-204ENST00000436439 PCNX4Q63HM2 1172 aa12.35□□□□□ -0.43
HMGCL-204ENST00000436439 METTL7BQ6UX53 244 aa12.35□□□□□ -0.43
HMGCL-204ENST00000436439 TSPYL2Q9H2G4 693 aaPredicted RBP12.35□□□□□ -0.43
HMGCL-204ENST00000436439 SETD4Q9NVD3 440 aa12.35□□□□□ -0.43
HMGCL-204ENST00000436439 MTUS1Q9ULD2 1270 aa12.35□□□□□ -0.43
HMGCL-204ENST00000436439 LOXHD1Q8IVV2 1947 aa12.35□□□□□ -0.43
HMGCL-204ENST00000436439 FAM205CA6NFA0 338 aa12.34□□□□□ -0.43
HMGCL-204ENST00000436439 NOP56O00567 594 aaKnown RBP12.34□□□□□ -0.43
HMGCL-204ENST00000436439 SPTLC2O15270 562 aa12.34□□□□□ -0.43
HMGCL-204ENST00000436439 ATP9AO75110 1047 aa12.34□□□□□ -0.43
HMGCL-204ENST00000436439 FOSP01100 380 aaPredicted RBP12.34□□□□□ -0.43
HMGCL-204ENST00000436439 CTSHP09668 335 aa12.34□□□□□ -0.43
HMGCL-204ENST00000436439 ZNF445P59923 1031 aa12.34□□□□□ -0.43
HMGCL-204ENST00000436439 ADAM17P78536 824 aa12.34□□□□□ -0.43
HMGCL-204ENST00000436439 SP4Q02446 784 aa12.34□□□□□ -0.43
HMGCL-204ENST00000436439 NEDD9Q14511 834 aa12.34□□□□□ -0.43
HMGCL-204ENST00000436439 PLEKHG4Q58EX7 1191 aa12.34□□□□□ -0.43
HMGCL-204ENST00000436439 RASGRP4Q8TDF6 673 aa12.34□□□□□ -0.43
HMGCL-204ENST00000436439 RAD9AQ99638 391 aa12.34□□□□□ -0.43
HMGCL-204ENST00000436439 SUGCTQ9HAC7 445 aa12.34□□□□□ -0.43
HMGCL-204ENST00000436439 PCDHB6Q9Y5E3 794 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms