RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 IQCF3P0C7M6 154 aa9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 ALADP13716 330 aa9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 GNAT2P19087 354 aa9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 AMPD1P23109 780 aa9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 PURAQ00577 322 aaKnown RBP9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 PTPN11Q06124 597 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 LRRFIP1Q32MZ4 808 aaKnown RBP9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 KRT40Q6A162 431 aa9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 CHSY3Q70JA7 882 aa9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 FBXO16Q8IX29 292 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 MTG1Q9BT17 334 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 FTOQ9C0B1 505 aaKnown RBP eCLIP9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 KCNH6Q9H252 994 aa9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 CYP39A1Q9NYL5 469 aa9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 ZNF536O15090 1300 aa9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 PLIN4Q96Q06 1357 aa9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 TRIP12Q14669 1992 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 CACNA1AO00555 2505 aa9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 WDR87Q6ZQQ6 2873 aa9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 RAD50Q92878 1312 aa9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 RBM47A0AV96 593 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 FAM86C2PA6NEL3 165 aa9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 MSTNO14793 375 aa9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 NKRFO15226 690 aaKnown RBP eCLIP9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 PARNO95453 639 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 TSPY3P0CV98 308 aa9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 TSPY8P0CW00 308 aa9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 ALAS1P13196 640 aa9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 SLC1A4P43007 532 aa9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 KCNJ6P48051 423 aa9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 SFSWAPQ12872 951 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 IKQ13123 557 aaPredicted RBP9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 LEXMQ3ZCV2 418 aa9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 EEPD1Q7L9B9 569 aa9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 ALYREFQ86V81 257 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 GJD3Q8N144 294 aa9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 WDR11Q9BZH6 1224 aa9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 PHACTR1Q9C0D0 580 aa9.94□□□□□ -0.82
NIF3L1-208ENST00000436412 CFAP54Q96N23 3096 aa9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 CCER2I3L3R5 266 aa9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 CHGBP05060 677 aa9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 SLC3A2P08195 630 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 MYL3P08590 195 aa9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 PDE4BQ07343 736 aa9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 FAM47CQ5HY64 1035 aa9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 NSMFQ6X4W1 530 aa9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 FAM178BQ8IXR5 827 aa9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 STK11IPQ8N1F8 1099 aa9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 LRRC47Q8N1G4 583 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 CAGE1Q8TC20 777 aa9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 AFAP1L1Q8TED9 768 aa9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 HSH2DQ96JZ2 352 aa9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 MPHOSPH6Q99547 160 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 UBE2ZQ9H832 354 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 CD320Q9NPF0 282 aa9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 ISY1Q9ULR0 285 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-208ENST00000436412 FAM186AA6NE01 2351 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 GNB5O14775 395 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 EFCAB14O75071 495 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 PRDM1O75626 825 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 ICAM1P05362 532 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 ZFYP08048 801 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 PTGS1P23219 599 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 MCCP23508 829 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 TDO2P48775 406 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 ERVK-21P61565 698 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 WDR5P61964 334 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 CRTC2Q53ET0 693 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 MUM1L1Q5H9M0 696 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 RCSD1Q6JBY9 416 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 STAG2Q8N3U4 1231 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 OR6J1Q8NGC5 347 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 APPBP2Q92624 585 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 TGS1Q96RS0 853 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 RAD9AQ99638 391 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 SLC30A3Q99726 388 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 NACAP1Q9BZK3 213 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 PNMA2Q9UL42 364 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 CCPG1Q9ULG6 757 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 PRR12Q9ULL5 1215 aa9.92□□□□□ -0.82
NIF3L1-208ENST00000436412 C5orf42Q9H799 3197 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 GPAA1O43292 621 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 GJB5O95377 273 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 APPP05067 770 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 MRE11P49959 708 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 ALDH5A1P51649 535 aaPredicted RBP9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 PTK7Q13308 1070 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 PPP2R5BQ15173 497 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 TMEM63BQ5T3F8 832 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 SYT9Q86SS6 491 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 KBTBD3Q8NAB2 608 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 SCFD2Q8WU76 684 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 OSBP2Q969R2 916 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 C2orf49Q9BVC5 232 aaPredicted RBP9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 BCL11AQ9H165 835 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 CHMP4BQ9H444 224 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 SUGCTQ9HAC7 445 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 CTNNA3Q9UI47 895 aa9.91□□□□□ -0.82
NIF3L1-208ENST00000436412 DDX49Q9Y6V7 483 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms