RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 ZNF365Q70YC5 407 aa23.62■■□□□ 1.37
GTF3A-203ENST00000435781 DEFB128Q7Z7B8 93 aa23.62■■□□□ 1.37
GTF3A-203ENST00000435781 CKAP2LQ8IYA6 745 aa23.62■■□□□ 1.37
GTF3A-203ENST00000435781 SLFN12Q8IYM2 578 aa23.62■■□□□ 1.37
GTF3A-203ENST00000435781 TRAPPC12Q8WVT3 735 aa23.62■■□□□ 1.37
GTF3A-203ENST00000435781 RNPC3Q96LT9 517 aaKnown RBP23.62■■□□□ 1.37
GTF3A-203ENST00000435781 K7ELQ4 463 aaPredicted RBP23.61■■□□□ 1.37
GTF3A-203ENST00000435781 ZNF862O60290 1169 aa23.61■■□□□ 1.37
GTF3A-203ENST00000435781 BAG4O95429 457 aaKnown RBP23.61■■□□□ 1.37
GTF3A-203ENST00000435781 CALCRLQ16602 461 aa23.61■■□□□ 1.37
GTF3A-203ENST00000435781 ZBTB10Q96DT7 871 aa23.61■■□□□ 1.37
GTF3A-203ENST00000435781 GBF1Q92538 1859 aa23.61■■□□□ 1.37
GTF3A-203ENST00000435781 COL1A2P08123 1366 aa23.61■■□□□ 1.37
GTF3A-203ENST00000435781 H3BQV1 296 aa23.6■■□□□ 1.37
GTF3A-203ENST00000435781 EML1O00423 815 aa23.6■■□□□ 1.37
GTF3A-203ENST00000435781 CAND2O75155 1236 aa23.6■■□□□ 1.37
GTF3A-203ENST00000435781 PFKMP08237 780 aa23.6■■□□□ 1.37
GTF3A-203ENST00000435781 MCM7P33993 719 aa23.6■■□□□ 1.37
GTF3A-203ENST00000435781 GPNMBQ14956 572 aa23.6■■□□□ 1.37
GTF3A-203ENST00000435781 TAF2Q6P1X5 1199 aa23.6■■□□□ 1.37
GTF3A-203ENST00000435781 BBXQ8WY36 941 aaPredicted RBP23.6■■□□□ 1.37
GTF3A-203ENST00000435781 SNX21Q969T3 373 aa23.6■■□□□ 1.37
GTF3A-203ENST00000435781 MICAL3Q7RTP6 2002 aa23.6■■□□□ 1.37
GTF3A-203ENST00000435781 ARID2Q68CP9 1835 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 ZBTB42B2RXF5 422 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 SOX1O00570 391 aaPredicted RBP23.59■■□□□ 1.37
GTF3A-203ENST00000435781 PARNO95453 639 aaKnown RBP23.59■■□□□ 1.37
GTF3A-203ENST00000435781 FGBP02675 491 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 TRAPPC10P48553 1259 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 PRKCEQ02156 737 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 SPIRE1Q08AE8 756 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 MBTPS1Q14703 1052 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 ZNF484Q5JVG2 852 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 TTC38Q5R3I4 469 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 RASIP1Q5U651 963 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 LARP1BQ659C4 914 aaKnown RBP23.59■■□□□ 1.37
GTF3A-203ENST00000435781 MCTP1Q6DN14 999 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 TRMT1LQ7Z2T5 733 aaKnown RBP23.59■■□□□ 1.37
GTF3A-203ENST00000435781 RPAINQ86UA6 219 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 FAM167AQ96KS9 214 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 MTMR9Q96QG7 549 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 TMEM60Q9H2L4 133 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 NOL7Q9UMY1 257 aaKnown RBP23.59■■□□□ 1.37
GTF3A-203ENST00000435781 PTPRSQ13332 1948 aa23.59■■□□□ 1.37
GTF3A-203ENST00000435781 RSPH10B2B2RC85 870 aa23.58■■□□□ 1.37
GTF3A-203ENST00000435781 NBNO60934 754 aa23.58■■□□□ 1.37
GTF3A-203ENST00000435781 OATP04181 439 aa23.58■■□□□ 1.37
GTF3A-203ENST00000435781 CTSHP09668 335 aa23.58■■□□□ 1.37
GTF3A-203ENST00000435781 RSPH10BP0C881 870 aa23.58■■□□□ 1.37
GTF3A-203ENST00000435781 ORC2Q13416 577 aaPredicted RBP23.58■■□□□ 1.37
GTF3A-203ENST00000435781 OTOP2Q7RTS6 562 aa23.58■■□□□ 1.37
GTF3A-203ENST00000435781 HERVK_113Q902F9 699 aa23.58■■□□□ 1.37
GTF3A-203ENST00000435781 INTS4Q96HW7 963 aaKnown RBP23.58■■□□□ 1.37
GTF3A-203ENST00000435781 PCDHA2Q9Y5H9 948 aa23.58■■□□□ 1.37
GTF3A-203ENST00000435781 SZT2Q5T011 3432 aa23.58■■□□□ 1.37
GTF3A-203ENST00000435781 CXCL10P02778 98 aa23.57■■□□□ 1.36
GTF3A-203ENST00000435781 ZNF174Q15697 407 aa23.57■■□□□ 1.36
GTF3A-203ENST00000435781 NCAPH2Q6IBW4 605 aa23.57■■□□□ 1.36
GTF3A-203ENST00000435781 MTHFD1LQ6UB35 978 aa23.57■■□□□ 1.36
GTF3A-203ENST00000435781 PIAS4Q8N2W9 510 aaPredicted RBP23.57■■□□□ 1.36
GTF3A-203ENST00000435781 BANK1Q8NDB2 785 aa23.57■■□□□ 1.36
GTF3A-203ENST00000435781 DNAJB3Q8WWF6 145 aa23.57■■□□□ 1.36
GTF3A-203ENST00000435781 FTOQ9C0B1 505 aaKnown RBP eCLIP23.57■■□□□ 1.36
GTF3A-203ENST00000435781 PCDHA12Q9UN75 941 aa23.57■■□□□ 1.36
GTF3A-203ENST00000435781 KLRC1P26715 233 aa23.56■■□□□ 1.36
GTF3A-203ENST00000435781 TXKP42681 527 aa23.56■■□□□ 1.36
GTF3A-203ENST00000435781 TOB1P50616 345 aaPredicted RBP23.56■■□□□ 1.36
GTF3A-203ENST00000435781 NBR1Q14596 966 aa23.56■■□□□ 1.36
GTF3A-203ENST00000435781 FAM26DQ5JW98 314 aa23.56■■□□□ 1.36
GTF3A-203ENST00000435781 RSPH3Q86UC2 560 aa23.56■■□□□ 1.36
GTF3A-203ENST00000435781 LRCH3Q96II8 777 aa23.56■■□□□ 1.36
GTF3A-203ENST00000435781 FAM49AQ9H0Q0 323 aaPredicted RBP23.56■■□□□ 1.36
GTF3A-203ENST00000435781 TTC12Q9H892 705 aaPredicted RBP23.56■■□□□ 1.36
GTF3A-203ENST00000435781 NRBP2Q9NSY0 501 aa23.56■■□□□ 1.36
GTF3A-203ENST00000435781 CXXC1Q9P0U4 656 aaPredicted RBP23.56■■□□□ 1.36
GTF3A-203ENST00000435781 SMIM35A0A1B0GVV1 85 aa23.55■■□□□ 1.36
GTF3A-203ENST00000435781 RBAK-RBAKDNI3L0D1 243 aa23.55■■□□□ 1.36
GTF3A-203ENST00000435781 RPLP2P05387 115 aaKnown RBP23.55■■□□□ 1.36
GTF3A-203ENST00000435781 PSMC5P62195 406 aa23.55■■□□□ 1.36
GTF3A-203ENST00000435781 EPHA7Q15375 998 aa23.55■■□□□ 1.36
GTF3A-203ENST00000435781 MTIF3Q9H2K0 278 aaKnown RBP23.55■■□□□ 1.36
GTF3A-203ENST00000435781 CEP131Q9UPN4 1083 aa23.55■■□□□ 1.36
GTF3A-203ENST00000435781 STBD1O95210 358 aa23.54■■□□□ 1.36
GTF3A-203ENST00000435781 C22orf31O95567 290 aa23.54■■□□□ 1.36
GTF3A-203ENST00000435781 P4HBP07237 508 aaKnown RBP23.54■■□□□ 1.36
GTF3A-203ENST00000435781 OR52Z1P0C646 297 aa23.54■■□□□ 1.36
GTF3A-203ENST00000435781 ACTN1P12814 892 aa23.54■■□□□ 1.36
GTF3A-203ENST00000435781 QARSP47897 775 aaKnown RBP23.54■■□□□ 1.36
GTF3A-203ENST00000435781 MGAT3Q09327 533 aa23.54■■□□□ 1.36
GTF3A-203ENST00000435781 XKR3Q5GH77 459 aa23.54■■□□□ 1.36
GTF3A-203ENST00000435781 HSCBQ8IWL3 235 aa23.54■■□□□ 1.36
GTF3A-203ENST00000435781 OSBPL7Q9BZF2 842 aa23.54■■□□□ 1.36
GTF3A-203ENST00000435781 CHRNA1P02708 482 aa23.53■■□□□ 1.36
GTF3A-203ENST00000435781 PDCP20941 246 aa23.53■■□□□ 1.36
GTF3A-203ENST00000435781 MRPS6P82932 125 aaKnown RBP23.53■■□□□ 1.36
GTF3A-203ENST00000435781 CNKSR3Q6P9H4 555 aa23.53■■□□□ 1.36
GTF3A-203ENST00000435781 FOXD4L1Q9NU39 408 aa23.53■■□□□ 1.36
GTF3A-203ENST00000435781 RGL1Q9NZL6 768 aa23.53■■□□□ 1.36
GTF3A-203ENST00000435781 SEPT9Q9UHD8 586 aaPredicted RBP23.53■■□□□ 1.36
GTF3A-203ENST00000435781 PCDHB6Q9Y5E3 794 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms