RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 SLC27A2O14975 620 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 PYGMP11217 842 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 NCAM1P13591 858 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 NAT1P18440 290 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 IGFBP6P24592 240 aaPredicted RBP7.84□□□□□ -1.15
HDAC9-213ENST00000433709 SPIRE1Q08AE8 756 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 FNDC3BQ53EP0 1204 aaKnown RBP7.84□□□□□ -1.15
HDAC9-213ENST00000433709 HABP4Q5JVS0 413 aaKnown RBP7.84□□□□□ -1.15
HDAC9-213ENST00000433709 ZNF772Q68DY9 489 aaPredicted RBP7.84□□□□□ -1.15
HDAC9-213ENST00000433709 AMIGO3Q86WK7 504 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 ZC3H7AQ8IWR0 971 aaKnown RBP7.84□□□□□ -1.15
HDAC9-213ENST00000433709 NLGN1Q8N2Q7 840 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 PANK1Q8TE04 598 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 APPBP2Q92624 585 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 FBXW5Q969U6 566 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 SIGLEC10Q96LC7 697 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 CATSPERZQ9NTU4 200 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 MYOTQ9UBF9 498 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 CD2APQ9Y5K6 639 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 IRAK3Q9Y616 596 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 XIRP1Q702N8 1843 aaKnown RBP7.84□□□□□ -1.15
HDAC9-213ENST00000433709 CLTCL1P53675 1640 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 PTCH1Q13635 1447 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 PRAG1Q86YV5 1406 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 ADGRL3Q9HAR2 1447 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 TLDC2A0PJX2 215 aa7.83□□□□□ -1.16
HDAC9-213ENST00000433709 IRS4O14654 1257 aaPredicted RBP7.83□□□□□ -1.16
HDAC9-213ENST00000433709 WNT9AO14904 365 aa7.83□□□□□ -1.16
HDAC9-213ENST00000433709 CDC45O75419 566 aa7.83□□□□□ -1.16
HDAC9-213ENST00000433709 PFKLP17858 780 aa7.83□□□□□ -1.16
HDAC9-213ENST00000433709 LIMS1P48059 325 aa7.83□□□□□ -1.16
HDAC9-213ENST00000433709 MEX3CQ5U5Q3 659 aaKnown RBP7.83□□□□□ -1.16
HDAC9-213ENST00000433709 C16orf86Q6ZW13 317 aa7.83□□□□□ -1.16
HDAC9-213ENST00000433709 TMEFF1Q8IYR6 380 aa7.83□□□□□ -1.16
HDAC9-213ENST00000433709 FAM26EQ8N5C1 309 aa7.83□□□□□ -1.16
HDAC9-213ENST00000433709 RNF38Q9H0F5 515 aa7.83□□□□□ -1.16
HDAC9-213ENST00000433709 SMOC1Q9H4F8 434 aa7.83□□□□□ -1.16
HDAC9-213ENST00000433709 EPB41L4AQ9HCS5 686 aaPredicted RBP7.83□□□□□ -1.16
HDAC9-213ENST00000433709 CNOT6Q9ULM6 557 aaKnown RBP7.83□□□□□ -1.16
HDAC9-213ENST00000433709 CBLCQ9ULV8 474 aa7.83□□□□□ -1.16
HDAC9-213ENST00000433709 METP08581 1390 aa7.83□□□□□ -1.16
HDAC9-213ENST00000433709 LRPPRCP42704 1394 aaKnown RBP7.83□□□□□ -1.16
HDAC9-213ENST00000433709 TCRBV5S4A2TA0A5A2 114 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 CKMP06732 381 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 PI3P19957 117 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 SDSP20132 328 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 STAT5AP42229 794 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 DNM2P50570 870 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 LINC00310P59036 64 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 PABPC4Q13310 644 aaKnown RBP eCLIP7.82□□□□□ -1.16
HDAC9-213ENST00000433709 TCEA2Q15560 299 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 KCNA10Q16322 511 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 RGL3Q3MIN7 710 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 ABHD17CQ6PCB6 329 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 ETV3LQ6ZN32 361 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 C16orf59Q7L2K0 433 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 OSTM1Q86WC4 334 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 MIB1Q86YT6 1006 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 CILP2Q8IUL8 1156 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 CPA5Q8WXQ8 436 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 SYT3Q9BQG1 590 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 ASH2LQ9UBL3 628 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 DSEQ9UL01 958 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 COQ6Q9Y2Z9 468 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 KCTD3Q9Y597 815 aa7.82□□□□□ -1.16
HDAC9-213ENST00000433709 PHLPP1O60346 1717 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 XRN1Q8IZH2 1706 aaKnown RBP7.81□□□□□ -1.16
HDAC9-213ENST00000433709 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-213ENST00000433709 PTPRUQ92729 1446 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 CCDC66A2RUB6 948 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 MAFKO60675 156 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 DNAJC8O75937 253 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-213ENST00000433709 LTFP02788 710 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 C8BP07358 591 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 PDE6AP16499 860 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 ST5P78524 1137 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 FOXO4P98177 505 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 GRIN1Q05586 938 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 CACNB2Q08289 660 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-213ENST00000433709 CYP4F22Q6NT55 531 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 ARHGAP36Q6ZRI8 547 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 BRINP3Q76B58 766 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 SYNPOQ8N3V7 929 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 SMARCC2Q8TAQ2 1214 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 UHMK1Q8TAS1 419 aaKnown RBP7.81□□□□□ -1.16
HDAC9-213ENST00000433709 SH3RF2Q8TEC5 729 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 CLEC4DQ8WXI8 215 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 CD244Q9BZW8 370 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 FAN1Q9Y2M0 1017 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 TELO2Q9Y4R8 837 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 DHX57Q6P158 1386 aaKnown RBP7.81□□□□□ -1.16
HDAC9-213ENST00000433709 ABCC11Q96J66 1382 aa7.81□□□□□ -1.16
HDAC9-213ENST00000433709 AHDC1Q5TGY3 1603 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-213ENST00000433709 RFPL3O75679 317 aa7.8□□□□□ -1.16
HDAC9-213ENST00000433709 KRT15P19012 456 aa7.8□□□□□ -1.16
HDAC9-213ENST00000433709 TUSC3Q13454 348 aa7.8□□□□□ -1.16
HDAC9-213ENST00000433709 CD300LDQ6UXZ3 194 aa7.8□□□□□ -1.16
HDAC9-213ENST00000433709 B3GNT8Q7Z7M8 397 aa7.8□□□□□ -1.16
HDAC9-213ENST00000433709 FAM129CQ86XR2 697 aa7.8□□□□□ -1.16
HDAC9-213ENST00000433709 FAM126BQ8IXS8 530 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms