RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 CIITAP33076 1130 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 DMTNQ08495 405 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 ADCK5Q3MIX3 580 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 ZNF449Q6P9G9 518 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 PEX26Q7Z412 305 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 SYCP3Q8IZU3 236 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 RAB3IL1Q8TBN0 382 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 GOLGA8TH3BQL2 631 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 ONECUT3O60422 494 aaPredicted RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 GOLGA8HP0CJ92 632 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 HK2P52789 917 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 GHRHRQ02643 423 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 ABCB5Q2M3G0 1257 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 NOA1Q8NC60 698 aaKnown RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 ANO3Q9BYT9 981 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 DDX56Q9NY93 547 aaKnown RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 EHD2Q9NZN4 543 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 RAD54BQ9Y620 910 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 CDK5RAP2Q96SN8 1893 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 NCKAP5LQ9HCH0 1330 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 NCAM2O15394 837 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 INF2Q27J81 1249 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 PCGF5Q86SE9 256 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 PRPF38AQ8NAV1 312 aaKnown RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 XXYLT1Q8NBI6 393 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 CNTNAP5Q8WYK1 1306 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 KRT7P08729 469 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 RPA1P27694 616 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 CENPCQ03188 943 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 BYSLQ13895 437 aaKnown RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 P3H1Q32P28 736 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 ARHGEF18Q6ZSZ5 1173 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 FAM178BQ8IXR5 827 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 CACTINQ8WUQ7 758 aaKnown RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 PPP1R13BQ96KQ4 1090 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 GREM2Q9H772 168 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 PCDHA12Q9UN75 941 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 PPEF1O14829 653 aaPredicted RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 IL18RAPO95256 599 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 AFPP02771 609 aaKnown RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 KRT10P13645 584 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 GARTP22102 1010 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 NR2F2P24468 414 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 BAG6P46379 1132 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 CCR3P51677 355 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 SLC18A3Q16572 532 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 EXOC3L4Q17RC7 722 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 CCDC93Q567U6 631 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 TBC1D9BQ66K14 1250 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 TMC2Q8TDI7 906 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 TEX13BQ9BXU2 312 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 ROPN1BQ9BZX4 212 aaPredicted RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 TRIM7Q9C029 511 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 ROPN1Q9HAT0 212 aaPredicted RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 C8orf4Q9NR00 106 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 B4E1Z4 1266 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 URI1O94763 535 aaPredicted RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 NPTXRO95502 500 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 SRGNP10124 158 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 SREBF1P36956 1147 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 MYO1EQ12965 1108 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 STRN3Q13033 797 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 MXD4Q14582 209 aaPredicted RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 LARGE2Q8N3Y3 721 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 CHST13Q8NET6 341 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 FBXO41Q8TF61 875 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 TSNARE1Q96NA8 513 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 AZI2Q9H6S1 392 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 KNTC1P50748 2209 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 CFAP73A6NFT4 308 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 DCAF8L1A6NGE4 600 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 RBAK-RBAKDNI3L0D1 243 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 EYA4O95677 639 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 FAM163BP0C2L3 166 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 PTGS1P23219 599 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 NDUFA8P51970 172 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 KRT31Q15323 416 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SEPT7Q16181 437 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 E2F4Q16254 413 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 PAPD7Q5XG87 772 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 DENND2CQ68D51 928 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 CCDC121Q6ZUS5 278 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 ATP6V0A4Q9HBG4 840 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SSU72Q9NP77 194 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 FOXD4L1Q9NU39 408 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 RRN3Q9NYV6 651 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 FNIP2Q9P278 1114 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SUCLA2Q9P2R7 463 aaPredicted RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 PCDHGC5Q9Y5F6 944 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 APOA4P06727 396 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 MYL4P12829 197 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 CCT2P78371 535 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 ZNF543Q08ER8 600 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SLC39A6Q13433 755 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 POLNQ7Z5Q5 900 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 NSUN6Q8TEA1 469 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SPATS2LQ9NUQ6 558 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 NSMCE4AQ9NXX6 385 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 CTNNAL1Q9UBT7 734 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SBF2Q86WG5 1849 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms