RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ENC1O14682 589 aa13.75□□□□□ -0.21
LDB3-205ENST00000429277 MECOMQ03112 1051 aa13.75□□□□□ -0.21
LDB3-205ENST00000429277 ALKBH5Q6P6C2 394 aaKnown RBP13.75□□□□□ -0.21
LDB3-205ENST00000429277 RNF207Q6ZRF8 634 aa13.75□□□□□ -0.21
LDB3-205ENST00000429277 TAB3Q8N5C8 712 aaPredicted RBP13.75□□□□□ -0.21
LDB3-205ENST00000429277 PUS7LQ9H0K6 701 aaKnown RBP13.75□□□□□ -0.21
LDB3-205ENST00000429277 UPF3AQ9H1J1 476 aaKnown RBP13.75□□□□□ -0.21
LDB3-205ENST00000429277 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.75□□□□□ -0.21
LDB3-205ENST00000429277 COPB2P35606 906 aa13.75□□□□□ -0.21
LDB3-205ENST00000429277 CCT5P48643 541 aa13.75□□□□□ -0.21
LDB3-205ENST00000429277 PDE1CQ14123 709 aaPredicted RBP13.75□□□□□ -0.21
LDB3-205ENST00000429277 TMEM35BQ8NCS4 154 aa13.75□□□□□ -0.21
LDB3-205ENST00000429277 ATP6V0A4Q9HBG4 840 aa13.75□□□□□ -0.21
LDB3-205ENST00000429277 ANGPTL2Q9UKU9 493 aa13.75□□□□□ -0.21
LDB3-205ENST00000429277 PTCH1Q13635 1447 aa13.75□□□□□ -0.21
LDB3-205ENST00000429277 PVALEFA0A1B0GWK0 134 aa13.75□□□□□ -0.21
LDB3-205ENST00000429277 KRT76Q01546 638 aa13.75□□□□□ -0.21
LDB3-205ENST00000429277 USP17L2Q6R6M4 530 aa13.75□□□□□ -0.21
LDB3-205ENST00000429277 KLHL29Q96CT2 875 aa13.75□□□□□ -0.21
LDB3-205ENST00000429277 HOXC10Q9NYD6 342 aa13.75□□□□□ -0.21
LDB3-205ENST00000429277 SPDYE2BA6NHP3 402 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 SPDYE6P0CI01 402 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 PMLP29590 882 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 LIG3P49916 1009 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 NR5A1Q13285 461 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 MB21D1Q8N884 522 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 PYROXD1Q8WU10 500 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 DEPDC1BQ8WUY9 529 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 SCG3Q8WXD2 468 aaKnown RBP13.74□□□□□ -0.21
LDB3-205ENST00000429277 FEM1BQ9UK73 627 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 H7C1W4 665 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 CALB1P05937 261 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 CASP2P42575 452 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 SESN3P58005 492 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 SNX1Q13596 522 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 C11orf57Q6ZUT1 292 aaPredicted RBP13.74□□□□□ -0.21
LDB3-205ENST00000429277 TTLL6Q8N841 843 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 ZMYND12Q9H0C1 365 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 SEL1LQ9UBV2 794 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 ERVK-7P63135 1459 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 GCKP35557 465 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 PKP1Q13835 747 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 KCTD16Q68DU8 428 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 NRBF2Q96F24 287 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 ANTXR1Q9H6X2 564 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 CEP72Q9P209 647 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 SLC13A4Q9UKG4 626 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 PPME1Q9Y570 386 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.74□□□□□ -0.21
LDB3-205ENST00000429277 UGGT1Q9NYU2 1555 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 PBRM1Q86U86 1689 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 SFNP31947 248 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 PPARDQ03181 441 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 ART3Q13508 389 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 TOGARAM2Q6ZUX3 1019 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 EXOC4Q96A65 974 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 FGD4Q96M96 766 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 ZBTB18Q99592 522 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 C2orf40Q9H1Z8 148 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 PYCARDQ9ULZ3 195 aa13.74□□□□□ -0.21
LDB3-205ENST00000429277 TMEM247A6NEH6 219 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 DTNBO60941 627 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 USP17L8P0C7I0 530 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 PYGBP11216 843 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 STXBP2Q15833 593 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 TBC1D9BQ66K14 1250 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 UNC5CLQ8IV45 518 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 MRPL40Q9NQ50 206 aaKnown RBP13.73□□□□□ -0.21
LDB3-205ENST00000429277 MEIS1O00470 390 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 ZBTB5O15062 677 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 MOCS3O95396 460 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 ADRA2BP18089 450 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 DDIT3P35638 169 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 PHKA2P46019 1235 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 IFT88Q13099 833 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 RASGRF1Q13972 1273 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 NECTIN1Q15223 517 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 CCDC138Q96M89 665 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 MAGEB5Q9BZ81 275 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 ABCB11O95342 1321 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 MYO5CQ9NQX4 1742 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 ANO9A1A5B4 782 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 PRKAB2O43741 272 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 ARL4CP56559 192 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 ZBTB33Q86T24 672 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 FBXL13Q8NEE6 735 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 MORC4Q8TE76 937 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 SLC10A4Q96EP9 437 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 ASNSD1Q9NWL6 643 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 RPS6KA4O75676 772 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 SKIP12755 728 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 TBXAS1P24557 533 aaPredicted RBP13.73□□□□□ -0.21
LDB3-205ENST00000429277 SOX5P35711 763 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 GOLGA8FQ08AF8 430 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 GOLGA8DPQ0D2H9 430 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 CATSPER4Q7RTX7 472 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 SMYD4Q8IYR2 804 aaPredicted RBP13.73□□□□□ -0.21
LDB3-205ENST00000429277 KRT38O76015 456 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 FTCDO95954 541 aa13.73□□□□□ -0.21
LDB3-205ENST00000429277 PSMA2P25787 234 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms