RNA–Protein interactions for RNA: ENST00000429017.2

HOXD8-202, Transcript of homeobox D8, humanhuman

TSL 2 BASIC

Gene HOXD8, Length 1,608 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-202ENST00000429017 ZNF543Q08ER8 600 aa7.7□□□□□ -1.18
HOXD8-202ENST00000429017 FAM47CQ5HY64 1035 aa7.7□□□□□ -1.18
HOXD8-202ENST00000429017 RNF207Q6ZRF8 634 aa7.7□□□□□ -1.18
HOXD8-202ENST00000429017 TBC1D10CQ8IV04 446 aa7.7□□□□□ -1.18
HOXD8-202ENST00000429017 ZSCAN10Q96SZ4 725 aaPredicted RBP7.7□□□□□ -1.18
HOXD8-202ENST00000429017 MTG1Q9BT17 334 aaPredicted RBP7.7□□□□□ -1.18
HOXD8-202ENST00000429017 ADD3Q9UEY8 706 aaKnown RBP7.7□□□□□ -1.18
HOXD8-202ENST00000429017 PRRC2BQ5JSZ5 2229 aaKnown RBP7.69□□□□□ -1.18
HOXD8-202ENST00000429017 LOC102724159A0A0B4J2E5 919 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 PFKMP08237 780 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 SUPT20HL2P0C7V6 817 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 GOLGA8HP0CJ92 632 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 HSPD1P10809 573 aaKnown RBP7.69□□□□□ -1.18
HOXD8-202ENST00000429017 POU3F3P20264 500 aaPredicted RBP7.69□□□□□ -1.18
HOXD8-202ENST00000429017 RFC5P40937 340 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 GATA4P43694 442 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 CPT1AP50416 773 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 PDE1AP54750 535 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 TAP1Q03518 808 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 NMIQ13287 307 aaPredicted RBP7.69□□□□□ -1.18
HOXD8-202ENST00000429017 PWP2Q15269 919 aaKnown RBP7.69□□□□□ -1.18
HOXD8-202ENST00000429017 TMEM67Q5HYA8 995 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 CCDC62Q6P9F0 684 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 TMCO2Q7Z6W1 182 aaPredicted RBP7.69□□□□□ -1.18
HOXD8-202ENST00000429017 DHX38Q92620 1227 aaKnown RBP7.69□□□□□ -1.18
HOXD8-202ENST00000429017 EVI5LQ96CN4 794 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 UBA5Q9GZZ9 404 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 HELLSQ9NRZ9 838 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 TOMM22Q9NS69 142 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 COL20A1Q9P218 1284 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 PCDHB11Q9Y5F2 797 aa7.69□□□□□ -1.18
HOXD8-202ENST00000429017 LCHNA4D1U4 455 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 LPXNO60711 386 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 TXNP10599 105 aaKnown RBP7.68□□□□□ -1.18
HOXD8-202ENST00000429017 PPP2R5BQ15173 497 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 LY6KQ17RY6 165 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 MCMDC2Q4G0Z9 681 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 ANKRD45Q5TZF3 282 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 GDF6Q6KF10 455 aaPredicted RBP7.68□□□□□ -1.18
HOXD8-202ENST00000429017 NFRKBQ6P4R8 1299 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 FCHSD1Q86WN1 690 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 HERC6Q8IVU3 1022 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 AFG1LQ8WV93 481 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 ARNTL2Q8WYA1 636 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 KAT2BQ92831 832 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 TAAR1Q96RJ0 339 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 ZKSCAN3Q9BRR0 538 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 COL4A4P53420 1690 aaPredicted RBP7.68□□□□□ -1.18
HOXD8-202ENST00000429017 NEDD4P46934 1319 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 WDR19Q8NEZ3 1342 aa7.68□□□□□ -1.18
HOXD8-202ENST00000429017 XIRP2A4UGR9 3374 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 TRIP12Q14669 1992 aaPredicted RBP7.67□□□□□ -1.18
HOXD8-202ENST00000429017 NKRFO15226 690 aaKnown RBP eCLIP7.67□□□□□ -1.18
HOXD8-202ENST00000429017 RFC2P35250 354 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 CHMP4BP1P59074 171 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 DEFB103AP81534 67 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 PTPN11Q06124 597 aaPredicted RBP7.67□□□□□ -1.18
HOXD8-202ENST00000429017 ARHGAP1Q07960 439 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 GRB10Q13322 594 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 USH1GQ495M9 461 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 EFHC2Q5JST6 749 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 ARTNQ5T4W7 220 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 DNERQ8NFT8 737 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 PHOSPHO2Q8TCD6 241 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 SYTL5Q8TDW5 730 aaPredicted RBP7.67□□□□□ -1.18
HOXD8-202ENST00000429017 SCFD2Q8WU76 684 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 WNT8BQ93098 351 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 SLC9A7Q96T83 725 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 FTOQ9C0B1 505 aaKnown RBP eCLIP7.67□□□□□ -1.18
HOXD8-202ENST00000429017 EPHX3Q9H6B9 360 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 ZMYM6O95789 1325 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 KRTAP4-8A0A0G2JLE6 195 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 KPNA6O60684 536 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 GPR37L1O60883 481 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 NBNO60934 754 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 MMP3P08254 477 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 ACTN1P12814 892 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 MCCD1P59942 119 aaPredicted RBP7.67□□□□□ -1.18
HOXD8-202ENST00000429017 WDR5P61964 334 aaKnown RBP7.67□□□□□ -1.18
HOXD8-202ENST00000429017 PTGISQ16647 500 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 SEPT14Q6ZU15 432 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 PGBD3Q8N328 593 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 RETREG2Q8NC44 543 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 RGS22Q8NE09 1264 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 TTC14Q96N46 770 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 CRBNQ96SW2 442 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 FAM117AQ9C073 453 aa7.67□□□□□ -1.18
HOXD8-202ENST00000429017 CCDC171Q6TFL3 1326 aa7.66□□□□□ -1.18
HOXD8-202ENST00000429017 OPLAHO14841 1288 aa7.66□□□□□ -1.18
HOXD8-202ENST00000429017 SPATA31C1P0DKV0 1188 aa7.66□□□□□ -1.18
HOXD8-202ENST00000429017 ZNF200P98182 395 aaPredicted RBP7.66□□□□□ -1.18
HOXD8-202ENST00000429017 BFSP2Q13515 415 aa7.66□□□□□ -1.18
HOXD8-202ENST00000429017 MBTPS1Q14703 1052 aa7.66□□□□□ -1.18
HOXD8-202ENST00000429017 CDC37Q16543 378 aaPredicted RBP7.66□□□□□ -1.18
HOXD8-202ENST00000429017 TRIM71Q2Q1W2 868 aaKnown RBP7.66□□□□□ -1.18
HOXD8-202ENST00000429017 MFSD6Q6ZSS7 791 aa7.66□□□□□ -1.18
HOXD8-202ENST00000429017 SESTD1Q86VW0 696 aa7.66□□□□□ -1.18
HOXD8-202ENST00000429017 ADGRF4Q8IZF3 695 aa7.66□□□□□ -1.18
HOXD8-202ENST00000429017 GDPD5Q8WTR4 605 aa7.66□□□□□ -1.18
HOXD8-202ENST00000429017 CD320Q9NPF0 282 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms